FFCP PHASE1:Hg19::chr4:101439242..101439256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51705 | |EntrezGene=51705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16041 | |HGNC=16041 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULC0,B4E347,Q4W5J1 | |UniProt=Q9ULC0,B4E347,Q4W5J1 | ||
|association_with_transcript=0bp_to_ENST00000296420,NM_001159694,NM_016242,uc003hvr.2,uc011cel.1,uc011cem.1_5end | |association_with_transcript=0bp_to_ENST00000296420,NM_001159694,NM_016242,uc003hvr.2,uc011cel.1,uc011cem.1_5end | ||
|cluster_id=chr4:101439242..101439256,- | |||
|coexpression_cluster_id=C2678 | |coexpression_cluster_id=C2678 | ||
|description=CAGE_peak_5_at_EMCN_5end | |description=CAGE_peak_5_at_EMCN_5end | ||
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|ontology_enrichment_celltype=CL:0002139!7.78e-27!24;CL:0000115!9.17e-24!35;CL:0000071!1.27e-18!18;CL:0002546!1.27e-18!18;CL:0002078!2.68e-18!44;CL:0000213!4.73e-12!57;CL:0000215!4.73e-12!57;CL:0005020!5.89e-10!6;CL:0002138!5.89e-10!6;CL:0005022!5.89e-10!6;CL:1000413!9.55e-10!9;CL:0002544!5.29e-07!6;CL:0002543!6.96e-07!6 | |ontology_enrichment_celltype=CL:0002139!7.78e-27!24;CL:0000115!9.17e-24!35;CL:0000071!1.27e-18!18;CL:0002546!1.27e-18!18;CL:0002078!2.68e-18!44;CL:0000213!4.73e-12!57;CL:0000215!4.73e-12!57;CL:0005020!5.89e-10!6;CL:0002138!5.89e-10!6;CL:0005022!5.89e-10!6;CL:1000413!9.55e-10!9;CL:0002544!5.29e-07!6;CL:0002543!6.96e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.23e-48;24!CL:0000115;4.80e-39;36!CL:0000071;2.99e-28;18!CL:0002078;2.20e-24;45!CL:0002138;3.64e-23;6!CL:0000213;2.97e-17;58!CL:0000215;2.97e-17;58!CL:0002544;2.75e-16;6!CL:0002543;7.01e-16;6!CL:0002618;5.94e-13;3!CL:1000413;9.64e-11;9!CL:0002549;3.50e-08;2!CL:0002188;3.43e-07;5 | |ontology_enrichment_celltype_v019=CL:0002139;6.23e-48;24!CL:0000115;4.80e-39;36!CL:0000071;2.99e-28;18!CL:0002078;2.20e-24;45!CL:0002138;3.64e-23;6!CL:0000213;2.97e-17;58!CL:0000215;2.97e-17;58!CL:0002544;2.75e-16;6!CL:0002543;7.01e-16;6!CL:0002618;5.94e-13;3!CL:1000413;9.64e-11;9!CL:0002549;3.50e-08;2!CL:0002188;3.43e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.90e-48,24;CL:0000115,1.88e-46,36;CL:0002078,5.35e-36,45;CL:0000071,2.13e-28,18;CL:0002546,2.13e-28,18;CL:0000213,1.23e-26,58;CL:0000215,1.23e-26,58;CL:0005020,3.26e-23,6;CL:0002138,3.26e-23,6;CL:0005022,3.26e-23,6;CL:0002544,2.43e-16,6;CL:0002543,5.00e-16,6;CL:0002618,5.73e-13,3;CL:1000413,8.90e-11,9;CL:0000222,6.54e-10,121;CL:0002549,2.71e-08,2;CL:0002188,3.19e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.99e-28;18!CL:0005022;3.64e-23;6 | |ontology_enrichment_development_v019=CL:0002546;2.99e-28;18!CL:0005022;3.64e-23;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-23!115;UBERON:0001986!1.27e-18!18;UBERON:0004638!1.27e-18!18;UBERON:0004852!1.27e-18!18;UBERON:0000477!3.35e-17!286;UBERON:0002049!5.49e-17!79;UBERON:0007798!5.49e-17!79;UBERON:0004111!2.58e-16!241;UBERON:0000025!9.89e-15!194;UBERON:0000055!2.61e-14!69;UBERON:0000487!3.01e-14!22;UBERON:0001009!1.60e-13!113;UBERON:0006914!2.41e-13!25;UBERON:0000119!5.03e-13!312;UBERON:0004535!1.10e-12!110;UBERON:0000483!1.05e-11!309;UBERON:0002616!6.03e-11!59;UBERON:0001981!2.32e-10!60;UBERON:0007500!2.32e-10!60;UBERON:0004537!2.32e-10!60;UBERON:0006965!2.32e-10!60;UBERON:0003915!9.55e-10!9;UBERON:0004700!9.55e-10!9;UBERON:0001917!9.55e-10!9;UBERON:0001049!1.41e-09!57;UBERON:0005068!1.41e-09!57;UBERON:0006241!1.41e-09!57;UBERON:0007135!1.41e-09!57;UBERON:0004872!2.44e-09!84;UBERON:0005743!7.26e-09!86;UBERON:0003075!9.58e-09!86;UBERON:0007284!9.58e-09!86;UBERON:0002298!2.89e-08!8;UBERON:0001017!3.24e-08!82;UBERON:0000955!5.30e-08!69;UBERON:0006238!5.30e-08!69;UBERON:0002346!5.81e-08!90;UBERON:0000073!8.02e-08!94;UBERON:0001016!8.02e-08!94;UBERON:0003076!2.13e-07!15;UBERON:0003057!2.13e-07!15;UBERON:0003914!2.81e-07!118;UBERON:0001473!3.93e-07!8;UBERON:0004536!3.93e-07!8;UBERON:0006558!3.93e-07!8;UBERON:0002420!4.01e-07!9;UBERON:0007245!4.01e-07!9;UBERON:0010009!4.01e-07!9;UBERON:0010011!4.01e-07!9;UBERON:0000454!4.01e-07!9;UBERON:0000467!5.46e-07!625;UBERON:0000480!6.33e-07!626;UBERON:0000468!7.04e-07!659;UBERON:0002465!7.32e-07!10;UBERON:0002308!7.79e-07!9;UBERON:0000125!7.79e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!2.93e-23!115;UBERON:0001986!1.27e-18!18;UBERON:0004638!1.27e-18!18;UBERON:0004852!1.27e-18!18;UBERON:0000477!3.35e-17!286;UBERON:0002049!5.49e-17!79;UBERON:0007798!5.49e-17!79;UBERON:0004111!2.58e-16!241;UBERON:0000025!9.89e-15!194;UBERON:0000055!2.61e-14!69;UBERON:0000487!3.01e-14!22;UBERON:0001009!1.60e-13!113;UBERON:0006914!2.41e-13!25;UBERON:0000119!5.03e-13!312;UBERON:0004535!1.10e-12!110;UBERON:0000483!1.05e-11!309;UBERON:0002616!6.03e-11!59;UBERON:0001981!2.32e-10!60;UBERON:0007500!2.32e-10!60;UBERON:0004537!2.32e-10!60;UBERON:0006965!2.32e-10!60;UBERON:0003915!9.55e-10!9;UBERON:0004700!9.55e-10!9;UBERON:0001917!9.55e-10!9;UBERON:0001049!1.41e-09!57;UBERON:0005068!1.41e-09!57;UBERON:0006241!1.41e-09!57;UBERON:0007135!1.41e-09!57;UBERON:0004872!2.44e-09!84;UBERON:0005743!7.26e-09!86;UBERON:0003075!9.58e-09!86;UBERON:0007284!9.58e-09!86;UBERON:0002298!2.89e-08!8;UBERON:0001017!3.24e-08!82;UBERON:0000955!5.30e-08!69;UBERON:0006238!5.30e-08!69;UBERON:0002346!5.81e-08!90;UBERON:0000073!8.02e-08!94;UBERON:0001016!8.02e-08!94;UBERON:0003076!2.13e-07!15;UBERON:0003057!2.13e-07!15;UBERON:0003914!2.81e-07!118;UBERON:0001473!3.93e-07!8;UBERON:0004536!3.93e-07!8;UBERON:0006558!3.93e-07!8;UBERON:0002420!4.01e-07!9;UBERON:0007245!4.01e-07!9;UBERON:0010009!4.01e-07!9;UBERON:0010011!4.01e-07!9;UBERON:0000454!4.01e-07!9;UBERON:0000467!5.46e-07!625;UBERON:0000480!6.33e-07!626;UBERON:0000468!7.04e-07!659;UBERON:0002465!7.32e-07!10;UBERON:0002308!7.79e-07!9;UBERON:0000125!7.79e-07!9 | ||
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|short_description=p5@EMCN | |short_description=p5@EMCN | ||
}} | }} |
Latest revision as of 02:49, 20 September 2015
Short description: | p5@EMCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EMCN_5end |
Coexpression cluster: | C2678_lung_Endothelial_Lymphatic_mature_migratory_adipose_Mast |
Association with transcript: | 0bp_to_ENST00000296420, NM_001159694, NM_016242, uc003hvr.2, uc011cel.1, uc011cem.1_5end |
EntrezGene: | EMCN |
HGNC: | 16041 |
UniProt: | Q9ULC0B4E347Q4W5J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.90e-48 | 24 |
endothelial cell | 1.88e-46 | 36 |
meso-epithelial cell | 5.35e-36 | 45 |
blood vessel endothelial cell | 2.13e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.13e-28 | 18 |
lining cell | 1.23e-26 | 58 |
barrier cell | 1.23e-26 | 58 |
lymphangioblast | 3.26e-23 | 6 |
endothelial cell of lymphatic vessel | 3.26e-23 | 6 |
vascular lymphangioblast | 3.26e-23 | 6 |
aortic endothelial cell | 2.43e-16 | 6 |
vein endothelial cell | 5.00e-16 | 6 |
endothelial cell of umbilical vein | 5.73e-13 | 3 |
endothelial cell of artery | 8.90e-11 | 9 |
mesodermal cell | 6.54e-10 | 121 |
fibroblast of choroid plexus | 2.71e-08 | 2 |
glomerular endothelial cell | 3.19e-07 | 5 |