FFCP PHASE1:Hg19::chr1:231666076..231666093,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:231666076..231666093,+
|short_description=p@chr1:231666076..231666093,+
|description=CAGE_peak_at_chr1:231666076..231666093,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:231666076..231666093,+ | |||
|coexpression_cluster_id=C446 | |||
|description=CAGE_peak_at_chr1:231666076..231666093,+ | |||
|id=chr1:231666076..231666093,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.69e-70!42;CL:0000860!1.33e-64!45;CL:0000766!3.19e-55!76;CL:0000557!1.05e-50!71;CL:0000839!9.82e-49!70;CL:0002009!1.05e-43!65;CL:0002194!1.35e-42!63;CL:0000576!1.35e-42!63;CL:0000040!1.35e-42!63;CL:0000559!1.35e-42!63;CL:0000763!3.44e-42!112;CL:0000049!3.44e-42!112;CL:0000738!1.29e-40!140;CL:0000037!1.56e-35!172;CL:0000566!1.56e-35!172;CL:0002031!2.27e-33!124;CL:0000988!7.37e-33!182;CL:0002032!1.46e-32!165;CL:0000837!1.46e-32!165;CL:0002087!3.42e-31!119;CL:0002393!2.84e-26!9;CL:0002397!2.84e-26!9;CL:0000134!2.40e-10!358;CL:0002274!3.40e-10!5;CL:0000457!3.40e-10!5;CL:0002191!3.40e-10!5;CL:0000097!3.40e-10!5;CL:0000831!3.40e-10!5;CL:0002028!3.40e-10!5;CL:0002320!6.57e-10!365;CL:0000875!1.57e-09!3;CL:0002396!1.57e-09!3;CL:0000842!3.80e-09!3;CL:0000767!5.48e-09!3;CL:0000219!2.24e-08!390;CL:0000224!5.95e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.43e-33;5!CL:0002393;1.84e-27;6!CL:0002397;1.84e-27;6!CL:0000163;5.33e-19;9!CL:0000766;6.66e-17;69!CL:0000576;7.09e-16;48!CL:0000860;1.68e-13;33!CL:0002057;1.68e-13;33!CL:0000473;1.21e-09;39!CL:0000234;1.21e-09;39!CL:0000763;7.58e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.43e-33,5;CL:0002028,1.43e-33,5;CL:0000839,7.93e-32,66;CL:0000557,2.37e-31,67;CL:0000766,3.58e-29,72;CL:0000860,8.67e-27,42;CL:0002057,8.67e-27,42;CL:0000473,2.11e-23,48;CL:0000234,2.11e-23,48;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000163,5.33e-19,9;CL:0002194,1.19e-18,59;CL:0000576,1.19e-18,59;CL:0000040,1.19e-18,59;CL:0000559,1.19e-18,59;CL:0002393,1.79e-18,9;CL:0002397,1.79e-18,9;CL:0002009,4.88e-18,61;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002087,2.00e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-21;42!CL:0000049;1.02e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.96e-44!80;UBERON:0002390!2.03e-40!102;UBERON:0003061!2.03e-40!102;UBERON:0001474!4.01e-40!86;UBERON:0002193!7.87e-36!112;UBERON:0004765!1.14e-32!101;UBERON:0001434!1.14e-32!101;UBERON:0002405!4.46e-29!115;UBERON:0002204!8.12e-16!167;UBERON:0003081!3.67e-15!216;UBERON:0002384!6.10e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-27,76;UBERON:0001474,1.34e-25,82;UBERON:0004765,2.65e-23,90;UBERON:0002405,1.53e-22,93;UBERON:0002390,2.24e-21,98;UBERON:0003061,2.24e-21,98;UBERON:0001434,6.08e-21,100;UBERON:0002193,2.30e-19,108;UBERON:0002204,2.44e-12,167;UBERON:0003081,4.95e-10,203 | |||
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| ||
|short_description=p@chr1:231666076..231666093,+ | |||
}} | }} |
Latest revision as of 05:03, 28 July 2015
Short description: | p@chr1:231666076..231666093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:231666076..231666093, + |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.43e-33 | 5 |
basophil mast progenitor cell | 1.43e-33 | 5 |
myeloid lineage restricted progenitor cell | 7.93e-32 | 66 |
granulocyte monocyte progenitor cell | 2.37e-31 | 67 |
myeloid leukocyte | 3.58e-29 | 72 |
classical monocyte | 8.67e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.67e-27 | 42 |
defensive cell | 2.11e-23 | 48 |
phagocyte | 2.11e-23 | 48 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
endocrine cell | 5.33e-19 | 9 |
monopoietic cell | 1.19e-18 | 59 |
monocyte | 1.19e-18 | 59 |
monoblast | 1.19e-18 | 59 |
promonocyte | 1.19e-18 | 59 |
intermediate monocyte | 1.79e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.79e-18 | 9 |
macrophage dendritic cell progenitor | 4.88e-18 | 61 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
nongranular leukocyte | 2.00e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-27 | 76 |
bone element | 1.34e-25 | 82 |
skeletal element | 2.65e-23 | 90 |
immune system | 1.53e-22 | 93 |
hematopoietic system | 2.24e-21 | 98 |
blood island | 2.24e-21 | 98 |
skeletal system | 6.08e-21 | 100 |
hemolymphoid system | 2.30e-19 | 108 |
musculoskeletal system | 2.44e-12 | 167 |
lateral plate mesoderm | 4.95e-10 | 203 |