FFCP PHASE1:Hg19::chr19:56048494..56048519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646643 | |EntrezGene=646643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34416 | |HGNC=34416 | ||
|TSSclassifier=strong | |||
|UniProt=P0C263 | |UniProt=P0C263 | ||
|association_with_transcript=-38bp_to_ENST00000413299_5end | |association_with_transcript=-38bp_to_ENST00000413299_5end | ||
|cluster_id=chr19:56048494..56048519,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_2_at_SBK2_5end | |description=CAGE_peak_2_at_SBK2_5end | ||
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|ontology_enrichment_celltype=CL:0002322!6.95e-11!5;CL:0000188!4.20e-07!9;CL:1000507!6.25e-07!12;CL:1000494!6.25e-07!12 | |ontology_enrichment_celltype=CL:0002322!6.95e-11!5;CL:0000188!4.20e-07!9;CL:1000507!6.25e-07!12;CL:1000494!6.25e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.21e-26;5!CL:0000669;1.45e-12;4!CL:0000650;5.16e-12;2!CL:1000500;5.16e-12;2!CL:1000618;5.16e-12;2!CL:1001318;5.16e-12;2!CL:0002173;5.16e-12;2!CL:0002321;1.02e-08;15!CL:0000540;2.91e-08;6!CL:0000404;2.91e-08;6!CL:0000039;3.84e-07;7!CL:0000586;3.84e-07;7 | |ontology_enrichment_celltype_v019=CL:0002322;1.21e-26;5!CL:0000669;1.45e-12;4!CL:0000650;5.16e-12;2!CL:1000500;5.16e-12;2!CL:1000618;5.16e-12;2!CL:1001318;5.16e-12;2!CL:0002173;5.16e-12;2!CL:0002321;1.02e-08;15!CL:0000540;2.91e-08;6!CL:0000404;2.91e-08;6!CL:0000039;3.84e-07;7!CL:0000586;3.84e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.15e-26,5;CL:0000669,1.88e-12,4;CL:0000650,5.75e-12,2;CL:1000500,5.75e-12,2;CL:1000618,5.75e-12,2;CL:1001318,5.75e-12,2;CL:0002173,5.75e-12,2;CL:0000540,2.74e-08,6;CL:0000031,2.74e-08,6;CL:0000404,2.74e-08,6;CL:0000039,3.41e-07,7;CL:0000586,3.41e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.53e-08;10!UBERON:0005564;1.53e-08;10!CL:0000031;2.91e-08;6!UBERON:0010227;6.77e-07;1 | |ontology_enrichment_development_v019=UBERON:0009117;1.53e-08;10!UBERON:0005564;1.53e-08;10!CL:0000031;2.91e-08;6!UBERON:0010227;6.77e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;5.07e-08;22!DOID:2994;5.07e-08;22!DOID:3371;5.57e-07;1!DOID:4549;5.57e-07;1!DOID:5861;5.57e-07;1!DOID:6496;5.57e-07;1 | |ontology_enrichment_disease_v019=DOID:3095;5.07e-08;22!DOID:2994;5.07e-08;22!DOID:3371;5.57e-07;1!DOID:4549;5.57e-07;1!DOID:5861;5.57e-07;1!DOID:6496;5.57e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,5.25e-08,22;DOID:2994,5.25e-08,22;DOID:3371,5.58e-07,1;DOID:4549,5.58e-07,1;DOID:5861,5.58e-07,1;DOID:6496,5.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!6.25e-07!12;UBERON:0001231!6.25e-07!12;UBERON:0004810!6.25e-07!12 | |ontology_enrichment_uberon=UBERON:0009773!6.25e-07!12;UBERON:0001231!6.25e-07!12;UBERON:0004810!6.25e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003567;5.16e-12;2!UBERON:0003838;5.16e-12;2!UBERON:0003586;5.16e-12;2!UBERON:0005169;5.16e-12;2!UBERON:0002321;5.16e-12;2!UBERON:0005215;5.16e-12;2!UBERON:0002303;5.16e-12;2!UBERON:0002319;5.16e-12;2!UBERON:0002079;6.77e-07;1!UBERON:0002135;6.77e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0003567;5.16e-12;2!UBERON:0003838;5.16e-12;2!UBERON:0003586;5.16e-12;2!UBERON:0005169;5.16e-12;2!UBERON:0002321;5.16e-12;2!UBERON:0005215;5.16e-12;2!UBERON:0002303;5.16e-12;2!UBERON:0002319;5.16e-12;2!UBERON:0002079;6.77e-07;1!UBERON:0002135;6.77e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,5.75e-12,2;UBERON:0003838,5.75e-12,2;UBERON:0003586,5.75e-12,2;UBERON:0005169,5.75e-12,2;UBERON:0002321,5.75e-12,2;UBERON:0005215,5.75e-12,2;UBERON:0002303,5.75e-12,2;UBERON:0002319,5.75e-12,2;UBERON:0002079,6.59e-07,1;UBERON:0002135,6.96e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39105342066543,2.38553582978673,4.53156377191122,2.48786532036889,3.78481276313443,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,2.35304930753057,0,0.105551628892876,0,0,0,0,3.25135725052623,11.0371750248068,0,0.831076008928724,0.895499018888713,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,1.83674364755032,0.154048617114644,0.614014698904518,1.10269257987624,0,0,0.93749290157711,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0.63337622438398,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,1.83665999992011,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.859930162358083,0,0,0,0,42.5394530653031,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,7.81990723562312,0,0.717873024576814,0.599037001496973,0,1.78537165953498,2.48578848200887,0,2.32991899054908,0.0787831823072236,0.412079291905832,0.26961417541674,0,0,0,0,2.41129722697529,1.51293380256957,2.49264202817511,0,0,0.0607495566580247,0,0,0.786818822024972,0.105600336519406,0,0,7.86164859010704,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,3.87376177821446,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,5.36103978437314,0,0,0,0,0,1.85280868296583,0,0,1.92914038270915,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26410889386181,0.116241425368125,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,3.4794432940146,0,0,0.198950775161368,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,5.04665699340316,1.09265571963696,9.88248307889208,1.83579893535567,2.93939145792117,2.38926738790597,0.250707539292375,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,1.74173398317569,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39105342066543,2.38553582978673,4.53156377191122,2.48786532036889,3.78481276313443,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,2.35304930753057,0,0.105551628892876,0,0,0,0,3.25135725052623,11.0371750248068,0,0.831076008928724,0.895499018888713,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,1.83674364755032,0.154048617114644,0.614014698904518,1.10269257987624,0,0,0.93749290157711,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0.63337622438398,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,1.83665999992011,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.859930162358083,0,0,0,0,42.5394530653031,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,7.81990723562312,0,0.717873024576814,0.599037001496973,0,1.78537165953498,2.48578848200887,0,2.32991899054908,0.0787831823072236,0.412079291905832,0.26961417541674,0,0,0,0,2.41129722697529,1.51293380256957,2.49264202817511,0,0,0.0607495566580247,0,0,0.786818822024972,0.105600336519406,0,0,7.86164859010704,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,3.87376177821446,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,5.36103978437314,0,0,0,0,0,1.85280868296583,0,0,1.92914038270915,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26410889386181,0.116241425368125,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,3.4794432940146,0,0,0.198950775161368,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,5.04665699340316,1.09265571963696,9.88248307889208,1.83579893535567,2.93939145792117,2.38926738790597,0.250707539292375,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,1.74173398317569,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p2@SBK2 | |short_description=p2@SBK2 | ||
}} | }} |
Latest revision as of 02:26, 20 September 2015
Short description: | p2@SBK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SBK2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -38bp_to_ENST00000413299_5end |
EntrezGene: | SBK2 |
HGNC: | 34416 |
UniProt: | P0C263 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.15e-26 | 5 |
pericyte cell | 1.88e-12 | 4 |
mesangial cell | 5.75e-12 | 2 |
kidney interstitial cell | 5.75e-12 | 2 |
juxtaglomerular complex cell | 5.75e-12 | 2 |
renal interstitial pericyte | 5.75e-12 | 2 |
extraglomerular mesangial cell | 5.75e-12 | 2 |
neuron | 2.74e-08 | 6 |
neuroblast | 2.74e-08 | 6 |
electrically signaling cell | 2.74e-08 | 6 |
germ line cell | 3.41e-07 | 7 |
germ cell | 3.41e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 5.75e-12 | 2 |
abdominal segment connective tissue | 5.75e-12 | 2 |
trunk connective tissue | 5.75e-12 | 2 |
interstitial tissue | 5.75e-12 | 2 |
extraglomerular mesangium | 5.75e-12 | 2 |
kidney interstitium | 5.75e-12 | 2 |
juxtaglomerular apparatus | 5.75e-12 | 2 |
mesangium | 5.75e-12 | 2 |
left cardiac atrium | 6.59e-07 | 1 |
mitral valve | 6.96e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.25e-08 | 22 |
germ cell cancer | 5.25e-08 | 22 |
chondrosarcoma | 5.58e-07 | 1 |
extraosseous chondrosarcoma | 5.58e-07 | 1 |
myxoid chondrosarcoma | 5.58e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 5.58e-07 | 1 |