FFCP PHASE1:Hg19::chr17:37366071..37366115,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:37366071..37366115,- | |||
|description=CAGE_peak_at_chr17:37366071..37366115,- | |description=CAGE_peak_at_chr17:37366071..37366115,- | ||
|id=chr17:37366071..37366115,- | |id=chr17:37366071..37366115,- | ||
|ontology_enrichment_celltype=CL:0002009!1.22e-07!65;CL:0000557!1.57e-07!71;CL:0002194!1.61e-07!63;CL:0000576!1.61e-07!63;CL:0000040!1.61e-07!63;CL:0000559!1.61e-07!63;CL:0000839!3.56e-07!70 | |ontology_enrichment_celltype=CL:0002009!1.22e-07!65;CL:0000557!1.57e-07!71;CL:0002194!1.61e-07!63;CL:0000576!1.61e-07!63;CL:0000040!1.61e-07!63;CL:0000559!1.61e-07!63;CL:0000839!3.56e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.12e-08;1!CL:0002625;2.12e-08;1!CL:0000222;2.12e-08;1!CL:0000216;2.12e-08;1!CL:0002591;2.12e-08;1!CL:0000319;2.12e-08;1 | |ontology_enrichment_celltype_v019=CL:0000511;2.12e-08;1!CL:0002625;2.12e-08;1!CL:0000222;2.12e-08;1!CL:0000216;2.12e-08;1!CL:0002591;2.12e-08;1!CL:0000319;2.12e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.27e-08,1;CL:0002625,1.27e-08,1;CL:0000216,1.27e-08,1;CL:0000319,2.29e-08,1;CL:0002591,2.64e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.78e-19;29!UBERON:0000358;8.44e-09;1!UBERON:0005754;2.12e-08;1 | |ontology_enrichment_development_v019=UBERON:0008947;4.78e-19;29!UBERON:0000358;8.44e-09;1!UBERON:0005754;2.12e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;2.12e-08;1 | |ontology_enrichment_disease_v019=DOID:3030;2.12e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,2.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001557!1.34e-12!19;UBERON:0001737!1.03e-11!9;UBERON:0007023!1.35e-07!115 | |ontology_enrichment_uberon=UBERON:0001557!1.34e-12!19;UBERON:0001737!1.03e-11!9;UBERON:0007023!1.35e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.46e-64;9!UBERON:0001557;2.46e-64;9!UBERON:0005904;7.28e-17;4!UBERON:0000072;8.31e-14;37!UBERON:0000065;1.20e-11;44!UBERON:0006947;1.00e-10;3!UBERON:0004054;1.00e-10;3!UBERON:0001723;2.26e-10;3!UBERON:0001033;2.26e-10;3!UBERON:0001000;6.02e-09;1!UBERON:0005352;6.02e-09;1!UBERON:0000998;2.12e-08;1!UBERON:0001136;2.12e-08;1!UBERON:0001343;2.12e-08;1!UBERON:0006868;2.12e-08;1!UBERON:0004910;2.12e-08;1!UBERON:0004813;2.12e-08;1!UBERON:0000058;4.84e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.46e-64;9!UBERON:0001557;2.46e-64;9!UBERON:0005904;7.28e-17;4!UBERON:0000072;8.31e-14;37!UBERON:0000065;1.20e-11;44!UBERON:0006947;1.00e-10;3!UBERON:0004054;1.00e-10;3!UBERON:0001723;2.26e-10;3!UBERON:0001033;2.26e-10;3!UBERON:0001000;6.02e-09;1!UBERON:0005352;6.02e-09;1!UBERON:0000998;2.12e-08;1!UBERON:0001136;2.12e-08;1!UBERON:0001343;2.12e-08;1!UBERON:0006868;2.12e-08;1!UBERON:0004910;2.12e-08;1!UBERON:0004813;2.12e-08;1!UBERON:0000058;4.84e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.04e-64,9;UBERON:0001557,1.66e-52,19;UBERON:0000072,5.94e-20,47;UBERON:0000065,4.39e-17,54;UBERON:0005904,4.49e-17,4;UBERON:0008947,2.75e-14,38;UBERON:0003258,2.75e-14,38;UBERON:0001004,7.07e-12,74;UBERON:0006947,9.10e-11,3;UBERON:0004054,9.10e-11,3;UBERON:0001723,4.19e-10,3;UBERON:0001033,4.19e-10,3;UBERON:0010056,4.19e-10,3;UBERON:0001041,8.87e-10,87;UBERON:0001000,6.03e-09,1;UBERON:0005352,6.03e-09,1;UBERON:0001136,1.27e-08,1;UBERON:0001343,1.27e-08,1;UBERON:0004910,1.27e-08,1;UBERON:0005154,1.27e-08,1;UBERON:0005295,1.27e-08,1;UBERON:0004813,1.27e-08,1;UBERON:0005297,1.27e-08,1;UBERON:0005294,1.27e-08,1;UBERON:0010141,1.27e-08,1;UBERON:0005891,1.27e-08,1;UBERON:0000998,1.84e-08,1;UBERON:0006868,1.84e-08,1;UBERON:0001042,9.55e-07,10;UBERON:0009145,9.55e-07,10 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.314843125254717,0,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.447830948479849,0,0.77272670290256,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,1.93645405075148,0,0.188242339542605,0.272906150057846,1.34834090667051,0.306083892370903,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0.434377689410233,0,0.368277635987565,1.26584954976354,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,2.43317435151318,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,3.90412440131485,2.69735504124963,3.13314338848527,2.31617342738027,1.74303555273925,1.18635309555548,1.48314438976181,2.15843611637881,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,1.39453664789186,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.28853842595289,0,0,0,0,0,0.324621940274555,0,0.684704037099577,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.398495976502139,0,0,0.409074730008619,0.246169610922139,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,3.15667522279512,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0.677294319023596,1.09633975629278,0.903270027585302,0.0969890164884194,0,0.677942222341597,0,0,0.379864775735272,0,0.561111741760736,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.998395002494955,0.429226048136571,1.11585728720936,0.53746777989381,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0.53168342911599,0.521745061811734,0.450772826991655,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0.213383459388282,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.425149840203366,0,0.558644917973244,0.636008701306837,0.315446980005013,0.80057074828547,0,0,0.192687675289379,0,0.159633859057151,0,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.443568258651136,0.202612753855184,0,0,0.507326481551255,0,0,0,0,0,0,0,0,0.455324382702595,0,0.230467975111559,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0.62041277132864,0,0,0.098150233615243,0,0.647428837187895,1.43727929598746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0.19337366392073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| |phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.314843125254717,0,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.447830948479849,0,0.77272670290256,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,1.93645405075148,0,0.188242339542605,0.272906150057846,1.34834090667051,0.306083892370903,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0.434377689410233,0,0.368277635987565,1.26584954976354,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,2.43317435151318,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,3.90412440131485,2.69735504124963,3.13314338848527,2.31617342738027,1.74303555273925,1.18635309555548,1.48314438976181,2.15843611637881,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,1.39453664789186,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.28853842595289,0,0,0,0,0,0.324621940274555,0,0.684704037099577,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.398495976502139,0,0,0.409074730008619,0.246169610922139,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,3.15667522279512,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0.677294319023596,1.09633975629278,0.903270027585302,0.0969890164884194,0,0.677942222341597,0,0,0.379864775735272,0,0.561111741760736,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.998395002494955,0.429226048136571,1.11585728720936,0.53746777989381,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0.53168342911599,0.521745061811734,0.450772826991655,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0.213383459388282,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.425149840203366,0,0.558644917973244,0.636008701306837,0.315446980005013,0.80057074828547,0,0,0.192687675289379,0,0.159633859057151,0,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.443568258651136,0.202612753855184,0,0,0.507326481551255,0,0,0,0,0,0,0,0,0.455324382702595,0,0.230467975111559,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0.62041277132864,0,0,0.098150233615243,0,0.647428837187895,1.43727929598746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0.19337366392073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| ||
|short_description=p@chr17:37366071..37366115,- | |short_description=p@chr17:37366071..37366115,- | ||
}} | }} |
Latest revision as of 16:05, 25 July 2015
Short description: | p@chr17:37366071..37366115, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:37366071..37366115, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.27e-08 | 1 |
seminiferous tubule epithelial cell | 1.27e-08 | 1 |
Sertoli cell | 1.27e-08 | 1 |
mucus secreting cell | 2.29e-08 | 1 |
smooth muscle cell of the pulmonary artery | 2.64e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.04e-64 | 9 |
upper respiratory tract | 1.66e-52 | 19 |
segment of respiratory tract | 5.94e-20 | 47 |
respiratory tract | 4.39e-17 | 54 |
duct of male reproductive system | 4.49e-17 | 4 |
respiratory primordium | 2.75e-14 | 38 |
endoderm of foregut | 2.75e-14 | 38 |
respiratory system | 7.07e-12 | 74 |
male genital duct | 9.10e-11 | 3 |
internal male genitalia | 9.10e-11 | 3 |
tongue | 4.19e-10 | 3 |
gustatory system | 4.19e-10 | 3 |
future tongue | 4.19e-10 | 3 |
foregut | 8.87e-10 | 87 |
vas deferens | 6.03e-09 | 1 |
spermatic cord | 6.03e-09 | 1 |
mesothelium | 1.27e-08 | 1 |
seminiferous tubule of testis | 1.27e-08 | 1 |
epithelium of male gonad | 1.27e-08 | 1 |
epithelial cord | 1.27e-08 | 1 |
sex cord | 1.27e-08 | 1 |
seminiferous tubule epithelium | 1.27e-08 | 1 |
testis sex cord | 1.27e-08 | 1 |
genital ridge | 1.27e-08 | 1 |
primitive sex cord of indifferent gonad | 1.27e-08 | 1 |
coelomic epithelium | 1.27e-08 | 1 |
seminal vesicle | 1.84e-08 | 1 |
seminal fluid secreting gland | 1.84e-08 | 1 |
chordate pharynx | 9.55e-07 | 10 |
pharyngeal region of foregut | 9.55e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.29e-08 | 1 |