FFCP PHASE1:Hg19::chrX:153200513..153200524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8260 | |EntrezGene=8260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18704 | |HGNC=18704 | ||
|TSSclassifier=strong | |||
|UniProt=C9JW55 | |UniProt=C9JW55 | ||
|association_with_transcript=0bp_to_ENST00000432089_5end | |association_with_transcript=0bp_to_ENST00000432089_5end | ||
|cluster_id=chrX:153200513..153200524,- | |||
|description=CAGE_peak_2_at_NAA10_5end | |description=CAGE_peak_2_at_NAA10_5end | ||
|id=chrX:153200513..153200524,- | |id=chrX:153200513..153200524,- | ||
|ontology_enrichment_celltype=CL:0002321!1.83e-16!248;CL:0000220!4.30e-16!246;CL:0000066!5.08e-13!254;CL:0000055!5.63e-11!180;CL:0000393!4.59e-08!60;CL:0000211!4.59e-08!60;CL:0000183!1.06e-07!59;CL:0000680!2.59e-07!57;CL:0000056!2.59e-07!57;CL:0000355!2.59e-07!57;CL:0000187!3.93e-07!54;CL:0000192!5.22e-07!42;CL:0000514!5.22e-07!42 | |ontology_enrichment_celltype=CL:0002321!1.83e-16!248;CL:0000220!4.30e-16!246;CL:0000066!5.08e-13!254;CL:0000055!5.63e-11!180;CL:0000393!4.59e-08!60;CL:0000211!4.59e-08!60;CL:0000183!1.06e-07!59;CL:0000680!2.59e-07!57;CL:0000056!2.59e-07!57;CL:0000355!2.59e-07!57;CL:0000187!3.93e-07!54;CL:0000192!5.22e-07!42;CL:0000514!5.22e-07!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.01e-16,250;CL:0000066,1.01e-12,253;CL:0000393,3.00e-08,61;CL:0000211,3.00e-08,61;CL:0000680,1.72e-07,58;CL:0000056,1.72e-07,58;CL:0000355,1.72e-07,58;CL:0000187,2.62e-07,55;CL:0000192,4.30e-07,43;CL:0000514,4.30e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!4.43e-17!239;DOID:162!2.36e-16!235;DOID:0050687!2.40e-12!143;DOID:305!4.57e-08!106;DOID:0050686!1.95e-07!137 | |ontology_enrichment_disease=DOID:14566!4.43e-17!239;DOID:162!2.36e-16!235;DOID:0050687!2.40e-12!143;DOID:305!4.57e-08!106;DOID:0050686!1.95e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,6.39e-17,239;DOID:162,3.40e-16,235;DOID:0050687,3.60e-12,143;DOID:305,6.85e-08,106;DOID:0050686,2.41e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002100!9.90e-14!216;UBERON:0003104!3.49e-13!238;UBERON:0009142!3.49e-13!238;UBERON:0000481!1.07e-11!347;UBERON:0000475!7.23e-10!365;UBERON:0000486!2.75e-09!82;UBERON:0005256!2.99e-09!143;UBERON:0004290!3.59e-09!70;UBERON:0000914!4.52e-09!83;UBERON:0002329!4.52e-09!83;UBERON:0003077!4.52e-09!83;UBERON:0003059!4.52e-09!83;UBERON:0007282!4.52e-09!83;UBERON:0009618!4.52e-09!83;UBERON:0007285!4.52e-09!83;UBERON:0001134!4.86e-08!61;UBERON:0002036!4.86e-08!61;UBERON:0003082!4.86e-08!61;UBERON:0002385!2.29e-07!63;UBERON:0001015!2.29e-07!63;UBERON:0000383!2.29e-07!63;UBERON:0000483!4.32e-07!309;UBERON:0000119!5.12e-07!312 | |ontology_enrichment_uberon=UBERON:0002100!9.90e-14!216;UBERON:0003104!3.49e-13!238;UBERON:0009142!3.49e-13!238;UBERON:0000481!1.07e-11!347;UBERON:0000475!7.23e-10!365;UBERON:0000486!2.75e-09!82;UBERON:0005256!2.99e-09!143;UBERON:0004290!3.59e-09!70;UBERON:0000914!4.52e-09!83;UBERON:0002329!4.52e-09!83;UBERON:0003077!4.52e-09!83;UBERON:0003059!4.52e-09!83;UBERON:0007282!4.52e-09!83;UBERON:0009618!4.52e-09!83;UBERON:0007285!4.52e-09!83;UBERON:0001134!4.86e-08!61;UBERON:0002036!4.86e-08!61;UBERON:0003082!4.86e-08!61;UBERON:0002385!2.29e-07!63;UBERON:0001015!2.29e-07!63;UBERON:0000383!2.29e-07!63;UBERON:0000483!4.32e-07!309;UBERON:0000119!5.12e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.90e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0000072;2.90e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.33e-13,199;UBERON:0007503,5.43e-11,78;UBERON:0007524,1.45e-09,73;UBERON:0000486,1.76e-09,83;UBERON:0003077,2.21e-09,72;UBERON:0007285,2.21e-09,72;UBERON:0002329,2.30e-09,71;UBERON:0003059,2.30e-09,71;UBERON:0007282,2.30e-09,71;UBERON:0004290,2.30e-09,71;UBERON:0009618,2.30e-09,71;UBERON:0001134,3.18e-08,62;UBERON:0002036,3.18e-08,62;UBERON:0003082,3.18e-08,62;UBERON:0005256,4.16e-08,122;UBERON:0003104,4.89e-08,160;UBERON:0009142,4.89e-08,160;UBERON:0002385,1.72e-07,64;UBERON:0001015,1.72e-07,64;UBERON:0000383,1.72e-07,64;UBERON:0000483,8.20e-07,306;UBERON:0000119,9.68e-07,309 | |||
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| ||
|short_description=p2@NAA10 | |short_description=p2@NAA10 | ||
}} | }} |
Latest revision as of 01:19, 20 September 2015
Short description: | p2@NAA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432089_5end |
EntrezGene: | NAA10 |
HGNC: | 18704 |
UniProt: | C9JW55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.01e-16 | 250 |
epithelial cell | 1.01e-12 | 253 |
electrically responsive cell | 3.00e-08 | 61 |
electrically active cell | 3.00e-08 | 61 |
muscle precursor cell | 1.72e-07 | 58 |
myoblast | 1.72e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-07 | 58 |
muscle cell | 2.62e-07 | 55 |
smooth muscle cell | 4.30e-07 | 43 |
smooth muscle myoblast | 4.30e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.33e-13 | 199 |
epithelial vesicle | 5.43e-11 | 78 |
dense mesenchyme tissue | 1.45e-09 | 73 |
multilaminar epithelium | 1.76e-09 | 83 |
paraxial mesoderm | 2.21e-09 | 72 |
presumptive paraxial mesoderm | 2.21e-09 | 72 |
somite | 2.30e-09 | 71 |
presomitic mesoderm | 2.30e-09 | 71 |
presumptive segmental plate | 2.30e-09 | 71 |
dermomyotome | 2.30e-09 | 71 |
trunk paraxial mesoderm | 2.30e-09 | 71 |
skeletal muscle tissue | 3.18e-08 | 62 |
striated muscle tissue | 3.18e-08 | 62 |
myotome | 3.18e-08 | 62 |
trunk mesenchyme | 4.16e-08 | 122 |
mesenchyme | 4.89e-08 | 160 |
entire embryonic mesenchyme | 4.89e-08 | 160 |
muscle tissue | 1.72e-07 | 64 |
musculature | 1.72e-07 | 64 |
musculature of body | 1.72e-07 | 64 |
epithelium | 8.20e-07 | 306 |
cell layer | 9.68e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.39e-17 | 239 |
cancer | 3.40e-16 | 235 |
cell type cancer | 3.60e-12 | 143 |
carcinoma | 6.85e-08 | 106 |
organ system cancer | 2.41e-07 | 137 |