FFCP PHASE1:Hg19::chr6:150618773..150618781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:150618773..150618781,+ | |||
|description=CAGE_peak_at_chr6:150618773..150618781,+ | |description=CAGE_peak_at_chr6:150618773..150618781,+ | ||
|id=chr6:150618773..150618781,+ | |id=chr6:150618773..150618781,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.28e-22!43;CL:0002368!9.38e-18!13;CL:0000223!1.62e-16!59;CL:0002202!1.45e-11!9;CL:0002632!1.45e-11!9;CL:0002159!3.51e-10!13;CL:0000860!3.57e-09!45;CL:0000066!1.14e-08!254;CL:0002057!3.82e-08!42;CL:0002251!6.29e-08!21;CL:0000557!2.52e-07!71;CL:0000063!2.96e-07!578;CL:0002009!5.26e-07!65 | |ontology_enrichment_celltype=CL:0002076!1.28e-22!43;CL:0002368!9.38e-18!13;CL:0000223!1.62e-16!59;CL:0002202!1.45e-11!9;CL:0002632!1.45e-11!9;CL:0002159!3.51e-10!13;CL:0000860!3.57e-09!45;CL:0000066!1.14e-08!254;CL:0002057!3.82e-08!42;CL:0002251!6.29e-08!21;CL:0000557!2.52e-07!71;CL:0000063!2.96e-07!578;CL:0002009!5.26e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0002159;4.36e-26;14!CL:0000307;8.04e-19;3!CL:0002621;1.70e-18;3!CL:0002368;2.56e-16;13!CL:0002076;3.86e-14;42!CL:0000575;1.93e-13;2!CL:0001014;1.54e-12;2!CL:0000317;1.54e-12;2!CL:1000448;1.54e-12;2!CL:0002308;1.54e-12;2!CL:0002140;1.54e-12;2!CL:0001016;1.54e-12;2!CL:0002202;7.52e-11;9!CL:0002632;7.52e-11;9!CL:0000362;1.25e-10;9!CL:0002077;9.89e-10;34!CL:0002166;6.71e-09;3!CL:0002251;3.62e-07;20!CL:0002252;4.20e-07;1!CL:0002327;7.09e-07;4 | |ontology_enrichment_celltype_v019=CL:0002159;4.36e-26;14!CL:0000307;8.04e-19;3!CL:0002621;1.70e-18;3!CL:0002368;2.56e-16;13!CL:0002076;3.86e-14;42!CL:0000575;1.93e-13;2!CL:0001014;1.54e-12;2!CL:0000317;1.54e-12;2!CL:1000448;1.54e-12;2!CL:0002308;1.54e-12;2!CL:0002140;1.54e-12;2!CL:0001016;1.54e-12;2!CL:0002202;7.52e-11;9!CL:0002632;7.52e-11;9!CL:0000362;1.25e-10;9!CL:0002077;9.89e-10;34!CL:0002166;6.71e-09;3!CL:0002251;3.62e-07;20!CL:0002252;4.20e-07;1!CL:0002327;7.09e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.61e-26,14;CL:0002621,1.47e-18,3;CL:0000068,1.56e-18,3;CL:0000069,1.56e-18,3;CL:0000307,1.56e-18,3;CL:0000377,1.56e-18,3;CL:0002076,5.08e-18,42;CL:0002368,3.06e-16,13;CL:0000575,2.26e-13,2;CL:0001014,1.08e-12,2;CL:0001016,1.08e-12,2;CL:0000317,1.29e-12,2;CL:1000448,1.29e-12,2;CL:0002308,1.29e-12,2;CL:0002140,1.29e-12,2;CL:0000223,2.08e-12,58;CL:0002202,8.25e-11,9;CL:0002632,8.25e-11,9;CL:0000362,1.12e-10,9;CL:0002077,4.82e-10,34;CL:0002166,7.72e-09,3;CL:0000066,1.44e-08,253;CL:0002252,2.84e-07,1;CL:0002251,3.32e-07,20;CL:0002327,5.05e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;8.04e-19;3!CL:0000223;2.80e-08;58 | |ontology_enrichment_development_v019=CL:0000377;8.04e-19;3!CL:0000223;2.80e-08;58 | ||
|ontology_enrichment_disease=DOID:1749!5.15e-10!14 | |ontology_enrichment_disease=DOID:1749!5.15e-10!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.03e-08!72;UBERON:0000062!1.82e-08!511;UBERON:0007196!2.64e-08!14;UBERON:0001558!2.64e-08!14;UBERON:0004765!2.18e-07!101;UBERON:0001434!2.18e-07!101;UBERON:0002371!3.77e-07!80;UBERON:0000923!4.13e-07!604;UBERON:0005291!4.13e-07!604;UBERON:0006598!4.13e-07!604;UBERON:0002532!4.13e-07!604;UBERON:0002050!4.69e-07!605;UBERON:0005423!4.69e-07!605;UBERON:0001474!7.83e-07!86;UBERON:0000467!8.00e-07!625;UBERON:0000480!9.06e-07!626 | |ontology_enrichment_uberon=UBERON:0001004!1.03e-08!72;UBERON:0000062!1.82e-08!511;UBERON:0007196!2.64e-08!14;UBERON:0001558!2.64e-08!14;UBERON:0004765!2.18e-07!101;UBERON:0001434!2.18e-07!101;UBERON:0002371!3.77e-07!80;UBERON:0000923!4.13e-07!604;UBERON:0005291!4.13e-07!604;UBERON:0006598!4.13e-07!604;UBERON:0002532!4.13e-07!604;UBERON:0002050!4.69e-07!605;UBERON:0005423!4.69e-07!605;UBERON:0001474!7.83e-07!86;UBERON:0000467!8.00e-07!625;UBERON:0000480!9.06e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.70e-18;3!UBERON:0002419;1.54e-12;2!UBERON:0007771;1.54e-12;2!UBERON:0003297;1.54e-12;2!UBERON:0001821;1.54e-12;2!UBERON:0003487;1.54e-12;2!UBERON:0001820;1.54e-12;2!UBERON:0010371;1.45e-08;31!UBERON:0003126;2.39e-08;7!UBERON:0001005;2.39e-08;7!UBERON:0003929;3.26e-08;7!UBERON:0000486;4.65e-08;12!UBERON:0003729;1.91e-07;13!UBERON:0003350;3.06e-07;8!UBERON:0001828;3.06e-07;8!UBERON:0000964;3.91e-07;4!UBERON:0010409;3.91e-07;4!UBERON:0001911;7.09e-07;4!UBERON:0001708;7.09e-07;4!UBERON:0008895;7.09e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001949;1.70e-18;3!UBERON:0002419;1.54e-12;2!UBERON:0007771;1.54e-12;2!UBERON:0003297;1.54e-12;2!UBERON:0001821;1.54e-12;2!UBERON:0003487;1.54e-12;2!UBERON:0001820;1.54e-12;2!UBERON:0010371;1.45e-08;31!UBERON:0003126;2.39e-08;7!UBERON:0001005;2.39e-08;7!UBERON:0003929;3.26e-08;7!UBERON:0000486;4.65e-08;12!UBERON:0003729;1.91e-07;13!UBERON:0003350;3.06e-07;8!UBERON:0001828;3.06e-07;8!UBERON:0000964;3.91e-07;4!UBERON:0010409;3.91e-07;4!UBERON:0001911;7.09e-07;4!UBERON:0001708;7.09e-07;4!UBERON:0008895;7.09e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.47e-18,3;UBERON:0002419,1.29e-12,2;UBERON:0007771,1.29e-12,2;UBERON:0003297,1.29e-12,2;UBERON:0001821,1.29e-12,2;UBERON:0003487,1.29e-12,2;UBERON:0001820,1.29e-12,2;UBERON:0005089,1.29e-12,2;UBERON:0005088,1.29e-12,2;UBERON:0003102,7.68e-09,99;UBERON:0003126,3.14e-08,7;UBERON:0001005,3.14e-08,7;UBERON:0001004,1.05e-07,74;UBERON:0003729,1.91e-07,13;UBERON:0003350,2.91e-07,8;UBERON:0001828,2.91e-07,8;UBERON:0000033,3.83e-07,56;UBERON:0000964,4.22e-07,4;UBERON:0010409,4.22e-07,4;UBERON:0004348,4.22e-07,4;UBERON:0005427,4.22e-07,4;UBERON:0001911,5.05e-07,4;UBERON:0005333,5.05e-07,4;UBERON:0008425,5.05e-07,4;UBERON:0005311,5.05e-07,4;UBERON:0001708,7.87e-07,4;UBERON:0008895,7.87e-07,4 | |||
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| ||
|short_description=p@chr6:150618773..150618781,+ | |short_description=p@chr6:150618773..150618781,+ | ||
}} | }} |
Latest revision as of 20:53, 30 July 2015
Short description: | p@chr6:150618773..150618781, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:150618773..150618781, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 4.61e-26 | 14 |
gingival epithelial cell | 1.47e-18 | 3 |
duct epithelial cell | 1.56e-18 | 3 |
branched duct epithelial cell | 1.56e-18 | 3 |
tracheal epithelial cell | 1.56e-18 | 3 |
tracheoblast | 1.56e-18 | 3 |
endo-epithelial cell | 5.08e-18 | 42 |
respiratory epithelial cell | 3.06e-16 | 13 |
corneal epithelial cell | 2.26e-13 | 2 |
CD1a-positive Langerhans cell | 1.08e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.08e-12 | 2 |
sebum secreting cell | 1.29e-12 | 2 |
epithelial cell of sweat gland | 1.29e-12 | 2 |
epithelial cell of skin gland | 1.29e-12 | 2 |
acinar cell of sebaceous gland | 1.29e-12 | 2 |
endodermal cell | 2.08e-12 | 58 |
epithelial cell of tracheobronchial tree | 8.25e-11 | 9 |
epithelial cell of lower respiratory tract | 8.25e-11 | 9 |
epidermal cell | 1.12e-10 | 9 |
ecto-epithelial cell | 4.82e-10 | 34 |
epithelial cell of Malassez | 7.72e-09 | 3 |
epithelial cell | 1.44e-08 | 253 |
epithelial cell of esophagus | 2.84e-07 | 1 |
epithelial cell of alimentary canal | 3.32e-07 | 20 |
mammary gland epithelial cell | 5.05e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.47e-18 | 3 |
skin gland | 1.29e-12 | 2 |
epidermis gland | 1.29e-12 | 2 |
gland of integumental system | 1.29e-12 | 2 |
sebaceous gland | 1.29e-12 | 2 |
skin sebaceous gland | 1.29e-12 | 2 |
sweat gland | 1.29e-12 | 2 |
sweat gland placode | 1.29e-12 | 2 |
sebaceous gland placode | 1.29e-12 | 2 |
surface structure | 7.68e-09 | 99 |
trachea | 3.14e-08 | 7 |
respiratory airway | 3.14e-08 | 7 |
respiratory system | 1.05e-07 | 74 |
mouth mucosa | 1.91e-07 | 13 |
epithelium of mucosa | 2.91e-07 | 8 |
gingiva | 2.91e-07 | 8 |
head | 3.83e-07 | 56 |
cornea | 4.22e-07 | 4 |
eye surface | 4.22e-07 | 4 |
optic eminence | 4.22e-07 | 4 |
corneal primordium | 4.22e-07 | 4 |
mammary gland | 5.05e-07 | 4 |
mammary bud | 5.05e-07 | 4 |
mammary ridge | 5.05e-07 | 4 |
mammary placode | 5.05e-07 | 4 |
jaw skeleton | 7.87e-07 | 4 |
splanchnocranium | 7.87e-07 | 4 |