FFCP PHASE1:Hg19::chr1:164528942..164528964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt=P40424 | |UniProt=P40424 | ||
|association_with_transcript=70bp_to_ENST00000420696_5end | |association_with_transcript=70bp_to_ENST00000420696_5end | ||
|cluster_id=chr1:164528942..164528964,+ | |||
|coexpression_cluster_id=C2537 | |coexpression_cluster_id=C2537 | ||
|description=CAGE_peak_11_at_PBX1_5end | |description=CAGE_peak_11_at_PBX1_5end | ||
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|ontology_enrichment_celltype=CL:0000133!7.27e-08!59;CL:0002319!4.23e-07!25 | |ontology_enrichment_celltype=CL:0000133!7.27e-08!59;CL:0002319!4.23e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.01e-07;5 | |ontology_enrichment_celltype_v019=CL:0002322;3.01e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.23e-08,5;CL:0000047,3.51e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-21!82;UBERON:0005743!2.02e-21!86;UBERON:0000073!2.87e-21!94;UBERON:0001016!2.87e-21!94;UBERON:0002346!1.94e-19!90;UBERON:0003075!3.87e-18!86;UBERON:0007284!3.87e-18!86;UBERON:0007023!1.16e-17!115;UBERON:0000924!2.13e-17!173;UBERON:0006601!2.13e-17!173;UBERON:0004121!3.00e-16!169;UBERON:0000955!1.61e-15!69;UBERON:0006238!1.61e-15!69;UBERON:0001049!2.65e-14!57;UBERON:0005068!2.65e-14!57;UBERON:0006241!2.65e-14!57;UBERON:0007135!2.65e-14!57;UBERON:0003056!2.38e-13!61;UBERON:0002616!3.00e-13!59;UBERON:0000153!5.64e-13!129;UBERON:0007811!5.64e-13!129;UBERON:0000033!1.21e-12!123;UBERON:0001893!4.34e-12!34;UBERON:0001869!5.58e-12!32;UBERON:0000481!1.12e-11!347;UBERON:0003080!1.48e-11!42;UBERON:0002791!1.53e-11!33;UBERON:0000475!2.58e-11!365;UBERON:0002780!2.91e-11!41;UBERON:0001890!2.91e-11!41;UBERON:0006240!2.91e-11!41;UBERON:0000468!3.15e-11!659;UBERON:0002020!6.14e-11!34;UBERON:0003528!6.14e-11!34;UBERON:0000064!1.78e-10!219;UBERON:0000956!3.21e-10!25;UBERON:0000203!3.21e-10!25;UBERON:0000062!2.76e-09!511;UBERON:0002619!7.93e-09!22;UBERON:0000477!8.34e-09!286;UBERON:0000119!8.77e-09!312;UBERON:0000483!9.25e-09!309;UBERON:0000922!3.53e-08!612;UBERON:0001950!5.45e-08!20;UBERON:0000025!3.84e-07!194 | |ontology_enrichment_uberon=UBERON:0001017!1.92e-21!82;UBERON:0005743!2.02e-21!86;UBERON:0000073!2.87e-21!94;UBERON:0001016!2.87e-21!94;UBERON:0002346!1.94e-19!90;UBERON:0003075!3.87e-18!86;UBERON:0007284!3.87e-18!86;UBERON:0007023!1.16e-17!115;UBERON:0000924!2.13e-17!173;UBERON:0006601!2.13e-17!173;UBERON:0004121!3.00e-16!169;UBERON:0000955!1.61e-15!69;UBERON:0006238!1.61e-15!69;UBERON:0001049!2.65e-14!57;UBERON:0005068!2.65e-14!57;UBERON:0006241!2.65e-14!57;UBERON:0007135!2.65e-14!57;UBERON:0003056!2.38e-13!61;UBERON:0002616!3.00e-13!59;UBERON:0000153!5.64e-13!129;UBERON:0007811!5.64e-13!129;UBERON:0000033!1.21e-12!123;UBERON:0001893!4.34e-12!34;UBERON:0001869!5.58e-12!32;UBERON:0000481!1.12e-11!347;UBERON:0003080!1.48e-11!42;UBERON:0002791!1.53e-11!33;UBERON:0000475!2.58e-11!365;UBERON:0002780!2.91e-11!41;UBERON:0001890!2.91e-11!41;UBERON:0006240!2.91e-11!41;UBERON:0000468!3.15e-11!659;UBERON:0002020!6.14e-11!34;UBERON:0003528!6.14e-11!34;UBERON:0000064!1.78e-10!219;UBERON:0000956!3.21e-10!25;UBERON:0000203!3.21e-10!25;UBERON:0000062!2.76e-09!511;UBERON:0002619!7.93e-09!22;UBERON:0000477!8.34e-09!286;UBERON:0000119!8.77e-09!312;UBERON:0000483!9.25e-09!309;UBERON:0000922!3.53e-08!612;UBERON:0001950!5.45e-08!20;UBERON:0000025!3.84e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.99e-12;49!UBERON:0001869;1.93e-08;32!UBERON:0001893;1.12e-07;34!UBERON:0002791;1.57e-07;32!UBERON:0000956;2.44e-07;25!UBERON:0000203;2.44e-07;25!UBERON:0000160;4.36e-07;17!UBERON:0003528;9.32e-07;34!UBERON:0002020;9.32e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0000922;5.99e-12;49!UBERON:0001869;1.93e-08;32!UBERON:0001893;1.12e-07;34!UBERON:0002791;1.57e-07;32!UBERON:0000956;2.44e-07;25!UBERON:0000203;2.44e-07;25!UBERON:0000160;4.36e-07;17!UBERON:0003528;9.32e-07;34!UBERON:0002020;9.32e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.61e-10,223;UBERON:0001016,2.05e-09,89;UBERON:0001869,3.06e-09,32;UBERON:0001017,5.87e-09,81;UBERON:0002346,7.24e-09,86;UBERON:0004121,1.18e-08,171;UBERON:0000924,1.18e-08,171;UBERON:0006601,1.18e-08,171;UBERON:0001893,1.84e-08,34;UBERON:0003075,4.34e-08,82;UBERON:0007284,4.34e-08,82;UBERON:0002791,4.96e-08,32;UBERON:0003056,1.34e-07,61;UBERON:0010314,2.01e-07,132;UBERON:0003528,2.40e-07,34;UBERON:0002020,2.40e-07,34;UBERON:0000956,2.51e-07,25;UBERON:0000203,2.51e-07,25;UBERON:0000160,6.23e-07,17;UBERON:0007023,9.14e-07,114 | |||
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| ||
|short_description=p11@PBX1 | |short_description=p11@PBX1 | ||
}} | }} |
Latest revision as of 09:12, 18 September 2015
Short description: | p11@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PBX1_5end |
Coexpression cluster: | C2537_uterus_occipital_cervix_rectum_mesothelioma_Cardiac_parietal |
Association with transcript: | 70bp_to_ENST00000420696_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | P40424 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.23e-08 | 5 |
neuronal stem cell | 3.51e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 5.61e-10 | 223 |
nervous system | 2.05e-09 | 89 |
cerebral hemisphere | 3.06e-09 | 32 |
central nervous system | 5.87e-09 | 81 |
neurectoderm | 7.24e-09 | 86 |
ectoderm-derived structure | 1.18e-08 | 171 |
ectoderm | 1.18e-08 | 171 |
presumptive ectoderm | 1.18e-08 | 171 |
telencephalon | 1.84e-08 | 34 |
neural plate | 4.34e-08 | 82 |
presumptive neural plate | 4.34e-08 | 82 |
regional part of telencephalon | 4.96e-08 | 32 |
pre-chordal neural plate | 1.34e-07 | 61 |
structure with developmental contribution from neural crest | 2.01e-07 | 132 |
brain grey matter | 2.40e-07 | 34 |
gray matter | 2.40e-07 | 34 |
cerebral cortex | 2.51e-07 | 25 |
pallium | 2.51e-07 | 25 |
intestine | 6.23e-07 | 17 |
adult organism | 9.14e-07 | 114 |