FFCP PHASE1:Hg19::chr13:72381549..72381552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:72381549..72381552,- | |||
|coexpression_cluster_id=C1187 | |coexpression_cluster_id=C1187 | ||
|description=CAGE_peak_at_chr13:72381549..72381552,- | |description=CAGE_peak_at_chr13:72381549..72381552,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;4.29e-12;3!CL:0000123;2.04e-09;2!CL:0000242;2.04e-09;2!CL:0000095;6.06e-07;17 | |ontology_enrichment_celltype_v019=CL:0000784;4.29e-12;3!CL:0000123;2.04e-09;2!CL:0000242;2.04e-09;2!CL:0000095;6.06e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.39e-12,3;CL:0000242,2.13e-09,2;CL:0000095,5.43e-07,17;CL:0000123,5.43e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;4.95e-07;14 | |ontology_enrichment_disease_v019=DOID:3119;4.95e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,4.61e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.16e-12!115;UBERON:0001049!6.24e-10!57;UBERON:0005068!6.24e-10!57;UBERON:0006241!6.24e-10!57;UBERON:0007135!6.24e-10!57;UBERON:0002780!8.41e-10!41;UBERON:0001890!8.41e-10!41;UBERON:0006240!8.41e-10!41;UBERON:0003080!2.10e-09!42;UBERON:0000073!2.76e-09!94;UBERON:0001016!2.76e-09!94;UBERON:0003056!4.63e-09!61;UBERON:0003075!6.33e-09!86;UBERON:0007284!6.33e-09!86;UBERON:0002616!1.35e-08!59;UBERON:0002346!1.37e-08!90;UBERON:0001017!1.71e-08!82;UBERON:0002020!2.40e-08!34;UBERON:0003528!2.40e-08!34;UBERON:0005743!2.61e-08!86;UBERON:0000955!1.61e-07!69;UBERON:0006238!1.61e-07!69;UBERON:0001893!2.75e-07!34;UBERON:0001869!3.02e-07!32;UBERON:0002791!6.33e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!8.16e-12!115;UBERON:0001049!6.24e-10!57;UBERON:0005068!6.24e-10!57;UBERON:0006241!6.24e-10!57;UBERON:0007135!6.24e-10!57;UBERON:0002780!8.41e-10!41;UBERON:0001890!8.41e-10!41;UBERON:0006240!8.41e-10!41;UBERON:0003080!2.10e-09!42;UBERON:0000073!2.76e-09!94;UBERON:0001016!2.76e-09!94;UBERON:0003056!4.63e-09!61;UBERON:0003075!6.33e-09!86;UBERON:0007284!6.33e-09!86;UBERON:0002616!1.35e-08!59;UBERON:0002346!1.37e-08!90;UBERON:0001017!1.71e-08!82;UBERON:0002020!2.40e-08!34;UBERON:0003528!2.40e-08!34;UBERON:0005743!2.61e-08!86;UBERON:0000955!1.61e-07!69;UBERON:0006238!1.61e-07!69;UBERON:0001893!2.75e-07!34;UBERON:0001869!3.02e-07!32;UBERON:0002791!6.33e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002784;3.47e-09;4!UBERON:0001905;9.94e-09;2!UBERON:0002757;9.94e-09;2!UBERON:0010134;9.94e-09;2!UBERON:0005408;9.94e-09;2!UBERON:0001899;9.94e-09;2!UBERON:0005409;1.45e-07;22!UBERON:0002108;1.97e-07;4!UBERON:0000160;2.74e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0002784;3.47e-09;4!UBERON:0001905;9.94e-09;2!UBERON:0002757;9.94e-09;2!UBERON:0010134;9.94e-09;2!UBERON:0005408;9.94e-09;2!UBERON:0001899;9.94e-09;2!UBERON:0005409;1.45e-07;22!UBERON:0002108;1.97e-07;4!UBERON:0000160;2.74e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,5.11e-09,4;UBERON:0001905,1.06e-08,2;UBERON:0002757,1.06e-08,2;UBERON:0010134,1.06e-08,2;UBERON:0005408,1.06e-08,2;UBERON:0001899,1.06e-08,2;UBERON:0003056,1.15e-07,61;UBERON:0002108,1.82e-07,4;UBERON:0000160,2.68e-07,17;UBERON:0010371,9.26e-07,104 | |||
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| ||
|short_description=p@chr13:72381549..72381552,- | |short_description=p@chr13:72381549..72381552,- | ||
}} | }} |
Latest revision as of 16:58, 24 July 2015
Short description: | p@chr13:72381549..72381552, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:72381549..72381552, - |
Coexpression cluster: | C1187_anaplastic_gastric_small_carcinoid_acute_retinoblastoma_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.39e-12 | 3 |
Merkel cell | 2.13e-09 | 2 |
neuron associated cell | 5.43e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.43e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 5.11e-09 | 4 |
pineal body | 1.06e-08 | 2 |
regional part of epithalamus | 1.06e-08 | 2 |
secretory circumventricular organ | 1.06e-08 | 2 |
circumventricular organ | 1.06e-08 | 2 |
epithalamus | 1.06e-08 | 2 |
pre-chordal neural plate | 1.15e-07 | 61 |
small intestine | 1.82e-07 | 4 |
intestine | 2.68e-07 | 17 |
ecto-epithelium | 9.26e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.61e-07 | 14 |