FFCP PHASE1:Hg19::chr10:79434348..79434354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79434348..79434354,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr10:79434348..79434354,- | |description=CAGE_peak_at_chr10:79434348..79434354,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.27e-09;2 | |ontology_enrichment_celltype_v019=CL:0000047;1.27e-09;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;4.83e-18;1!DOID:0060061;4.83e-18;1!DOID:8691;4.83e-18;1!DOID:0060058;1.65e-15;10!DOID:3307;1.71e-09;2 | |ontology_enrichment_disease_v019=DOID:0060060;4.83e-18;1!DOID:0060061;4.83e-18;1!DOID:8691;4.83e-18;1!DOID:0060058;1.65e-15;10!DOID:3307;1.71e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.44e-18,1;DOID:0060061,4.44e-18,1;DOID:8691,4.44e-18,1;DOID:0060058,1.50e-15,10;DOID:3307,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000956!5.13e-08!25;UBERON:0000203!5.13e-08!25;UBERON:0001950!1.07e-07!20;UBERON:0001893!7.98e-07!34;UBERON:0002619!8.66e-07!22 | |ontology_enrichment_uberon=UBERON:0000956!5.13e-08!25;UBERON:0000203!5.13e-08!25;UBERON:0001950!1.07e-07!20;UBERON:0001893!7.98e-07!34;UBERON:0002619!8.66e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.44e-16;10!UBERON:0000178;9.60e-11;15!UBERON:0000179;9.60e-11;15!UBERON:0000463;9.60e-11;15!UBERON:0002390;1.54e-08;32!UBERON:0000478;6.41e-07;24!UBERON:0002106;7.92e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002331;8.44e-16;10!UBERON:0000178;9.60e-11;15!UBERON:0000179;9.60e-11;15!UBERON:0000463;9.60e-11;15!UBERON:0002390;1.54e-08;32!UBERON:0000478;6.41e-07;24!UBERON:0002106;7.92e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.65e-16,10;UBERON:0000358,8.65e-16,10;UBERON:0000307,8.65e-16,10;UBERON:0000091,8.65e-16,10;UBERON:0000087,8.65e-16,10;UBERON:0007010,8.65e-16,10;UBERON:0007806,8.65e-16,10;UBERON:0008780,8.65e-16,10;UBERON:0005728,8.65e-16,10;UBERON:0000178,9.76e-11,15;UBERON:0000179,9.76e-11,15;UBERON:0000463,9.76e-11,15;UBERON:0000478,6.48e-07,24;UBERON:0002106,7.70e-07,3;UBERON:0004854,7.70e-07,3;UBERON:0009034,7.70e-07,3;UBERON:0002095,7.70e-07,3;UBERON:0004782,7.70e-07,3;UBERON:0003281,7.70e-07,3;UBERON:0009664,7.70e-07,3;UBERON:0002296,7.70e-07,3;UBERON:0005602,7.70e-07,3;UBERON:0001179,7.70e-07,3;UBERON:0006293,7.70e-07,3 | |||
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| ||
|short_description=p@chr10:79434348..79434354,- | |short_description=p@chr10:79434348..79434354,- | ||
}} | }} |
Latest revision as of 15:48, 23 July 2015
Short description: | p@chr10:79434348..79434354, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79434348..79434354, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.65e-16 | 10 |
blastocyst | 8.65e-16 | 10 |
blastula | 8.65e-16 | 10 |
bilaminar disc | 8.65e-16 | 10 |
inner cell mass | 8.65e-16 | 10 |
cleaving embryo | 8.65e-16 | 10 |
connecting stalk | 8.65e-16 | 10 |
inner cell mass derived epiblast | 8.65e-16 | 10 |
extraembryonic mesoderm | 8.65e-16 | 10 |
blood | 9.76e-11 | 15 |
haemolymphatic fluid | 9.76e-11 | 15 |
organism substance | 9.76e-11 | 15 |
extraembryonic structure | 6.48e-07 | 24 |
spleen | 7.70e-07 | 3 |
gastrointestinal system mesentery | 7.70e-07 | 3 |
stomach region | 7.70e-07 | 3 |
mesentery | 7.70e-07 | 3 |
gastrointestinal system serosa | 7.70e-07 | 3 |
mesentery of stomach | 7.70e-07 | 3 |
gut mesentery | 7.70e-07 | 3 |
dorsal mesentery | 7.70e-07 | 3 |
dorsal mesogastrium | 7.70e-07 | 3 |
peritoneal cavity | 7.70e-07 | 3 |
spleen primordium | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.44e-18 | 1 |
cutaneous T cell lymphoma | 4.44e-18 | 1 |
mycosis fungoides | 4.44e-18 | 1 |
lymphoma | 1.50e-15 | 10 |
teratoma | 1.44e-09 | 2 |