FFCP PHASE1:Hg19::chr8:19540266..19540277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55790 | |EntrezGene=55790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |HGNC=24290 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDX6 | |UniProt=Q8TDX6 | ||
|association_with_transcript=0bp_to_ENST00000311540,ENST00000397998_5end | |association_with_transcript=0bp_to_ENST00000311540,ENST00000397998_5end | ||
|cluster_id=chr8:19540266..19540277,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_16_at_CSGALNACT1_5end | |description=CAGE_peak_16_at_CSGALNACT1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.67e-09;3!CL:0000775;1.67e-09;3 | |ontology_enrichment_celltype_v019=CL:0002541;1.67e-09;3!CL:0000775;1.67e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.54e-09,3;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.15e-26;1!UBERON:0010227;5.23e-26;1!UBERON:0005062;1.18e-25;4!UBERON:0007284;1.18e-25;4 | |ontology_enrichment_development_v019=UBERON:0010226;3.15e-26;1!UBERON:0010227;5.23e-26;1!UBERON:0005062;1.18e-25;4!UBERON:0007284;1.18e-25;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4 | |ontology_enrichment_disease_v019=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,9.40e-14,2;DOID:1287,1.59e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.00e-35;25!UBERON:0004151;5.51e-34;3!UBERON:0003978;8.37e-34;3!UBERON:0000946;8.37e-34;3!UBERON:0002084;3.15e-26;1!UBERON:0002146;3.15e-26;1!UBERON:0002082;3.15e-26;1!UBERON:0005623;3.15e-26;1!UBERON:0002079;5.23e-26;1!UBERON:0002135;9.79e-26;1!UBERON:0000948;1.78e-18;22!UBERON:0002081;1.00e-13;2!UBERON:0002133;1.37e-13;2!UBERON:0010313;6.77e-11;10!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.00e-35;25!UBERON:0004151;5.51e-34;3!UBERON:0003978;8.37e-34;3!UBERON:0000946;8.37e-34;3!UBERON:0002084;3.15e-26;1!UBERON:0002146;3.15e-26;1!UBERON:0002082;3.15e-26;1!UBERON:0005623;3.15e-26;1!UBERON:0002079;5.23e-26;1!UBERON:0002135;9.79e-26;1!UBERON:0000948;1.78e-18;22!UBERON:0002081;1.00e-13;2!UBERON:0002133;1.37e-13;2!UBERON:0010313;6.77e-11;10!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.51e-34,3;UBERON:0003978,9.10e-34,3;UBERON:0009751,9.10e-34,3;UBERON:0000946,9.10e-34,3;UBERON:0002523,9.10e-34,3;UBERON:0005983,9.10e-34,3;UBERON:0002165,9.10e-34,3;UBERON:0002062,9.10e-34,3;UBERON:0007280,9.10e-34,3;UBERON:0007100,4.19e-33,27;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0002146,3.58e-26,1;UBERON:0005623,3.58e-26,1;UBERON:0002079,5.93e-26,1;UBERON:0002135,9.79e-26,1;UBERON:0000948,5.68e-17,24;UBERON:0005498,5.68e-17,24;UBERON:0004140,5.68e-17,24;UBERON:0009881,5.68e-17,24;UBERON:0004141,5.68e-17,24;UBERON:0003084,5.68e-17,24;UBERON:0007005,5.68e-17,24;UBERON:0004139,5.68e-17,24;UBERON:0004291,5.68e-17,24;UBERON:0004797,4.07e-15,7;UBERON:0002081,1.07e-13,2;UBERON:0010227,1.07e-13,2;UBERON:0002133,1.37e-13,2;UBERON:0003103,2.81e-13,68;UBERON:0010313,6.94e-11,10;UBERON:0002342,6.94e-11,10;UBERON:0005062,6.94e-11,10;UBERON:0000920,1.81e-09,3;UBERON:0001009,4.38e-08,112;UBERON:0007023,6.07e-08,114 | |||
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| ||
|short_description=p16@CSGALNACT1 | |short_description=p16@CSGALNACT1 | ||
}} | }} |
Latest revision as of 07:35, 17 September 2015
Short description: | p16@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CSGALNACT1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000311540, ENST00000397998_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | Q8TDX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.54e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 5.51e-34 | 3 |
valve | 9.10e-34 | 3 |
cardiac mesenchyme | 9.10e-34 | 3 |
cardial valve | 9.10e-34 | 3 |
tunica intima | 9.10e-34 | 3 |
heart layer | 9.10e-34 | 3 |
endocardium | 9.10e-34 | 3 |
endocardial cushion | 9.10e-34 | 3 |
presumptive endocardium | 9.10e-34 | 3 |
primary circulatory organ | 4.19e-33 | 27 |
heart left ventricle | 2.78e-26 | 1 |
cardiac ventricle | 2.78e-26 | 1 |
future cardiac ventricle | 2.78e-26 | 1 |
pulmonary valve | 3.58e-26 | 1 |
semi-lunar valve | 3.58e-26 | 1 |
left cardiac atrium | 5.93e-26 | 1 |
mitral valve | 9.79e-26 | 1 |
heart | 5.68e-17 | 24 |
primitive heart tube | 5.68e-17 | 24 |
primary heart field | 5.68e-17 | 24 |
anterior lateral plate mesoderm | 5.68e-17 | 24 |
heart tube | 5.68e-17 | 24 |
heart primordium | 5.68e-17 | 24 |
cardiac mesoderm | 5.68e-17 | 24 |
cardiogenic plate | 5.68e-17 | 24 |
heart rudiment | 5.68e-17 | 24 |
blood vessel layer | 4.07e-15 | 7 |
cardiac atrium | 1.07e-13 | 2 |
future cardiac atrium | 1.07e-13 | 2 |
atrioventricular valve | 1.37e-13 | 2 |
compound organ | 2.81e-13 | 68 |
neural crest-derived structure | 6.94e-11 | 10 |
neural crest | 6.94e-11 | 10 |
neural fold | 6.94e-11 | 10 |
egg chorion | 1.81e-09 | 3 |
circulatory system | 4.38e-08 | 112 |
adult organism | 6.07e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.40e-14 | 2 |
cardiovascular system disease | 1.59e-07 | 4 |