FFCP PHASE1:Hg19::chr1:85155881..85155892,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:85155881..85155892,-
|short_description=p9@SSX2IP
|description=CAGE_peak_9_at_SSX2IP_5end
|association_with_transcript=79bp_to_uc001dkg.2,uc001dkh.2,uc009w...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117178 | |EntrezGene=117178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16509 | |HGNC=16509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_uc001dkg.2,uc001dkh.2,uc009wci.2,uc010orz.1_5end | |||
|cluster_id=chr1:85155881..85155892,- | |||
|description=CAGE_peak_9_at_SSX2IP_5end | |||
|id=chr1:85155881..85155892,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.17e-09;2!CL:0000242;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.08e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.38e-07;10!UBERON:0005564;3.38e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.14e-17!82;UBERON:0000955!2.34e-17!69;UBERON:0006238!2.34e-17!69;UBERON:0002780!7.16e-17!41;UBERON:0001890!7.16e-17!41;UBERON:0006240!7.16e-17!41;UBERON:0000073!9.68e-17!94;UBERON:0001016!9.68e-17!94;UBERON:0005743!2.46e-16!86;UBERON:0003080!2.66e-16!42;UBERON:0001049!2.67e-16!57;UBERON:0005068!2.67e-16!57;UBERON:0006241!2.67e-16!57;UBERON:0007135!2.67e-16!57;UBERON:0001869!9.80e-16!32;UBERON:0002616!1.87e-15!59;UBERON:0001893!1.78e-14!34;UBERON:0002020!3.46e-14!34;UBERON:0003528!3.46e-14!34;UBERON:0002791!2.37e-13!33;UBERON:0000956!2.58e-13!25;UBERON:0000203!2.58e-13!25;UBERON:0000153!3.56e-12!129;UBERON:0007811!3.56e-12!129;UBERON:0003075!3.66e-12!86;UBERON:0007284!3.66e-12!86;UBERON:0003056!5.18e-12!61;UBERON:0002619!6.72e-12!22;UBERON:0004121!1.64e-11!169;UBERON:0001950!2.23e-11!20;UBERON:0002346!3.34e-11!90;UBERON:0000033!4.81e-11!123;UBERON:0000924!6.24e-11!173;UBERON:0006601!6.24e-11!173;UBERON:0000200!1.28e-10!6;UBERON:0007023!1.86e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;1.53e-16;1!UBERON:0009899;1.53e-16;1!UBERON:0002021;3.88e-13;5!UBERON:0001950;6.75e-12;20!UBERON:0002619;6.88e-11;22!UBERON:0000956;1.15e-09;25!UBERON:0000203;1.15e-09;25!UBERON:0000007;6.17e-09;2!UBERON:0000473;8.78e-09;8!UBERON:0002780;1.37e-07;41!UBERON:0001890;1.37e-07;41!UBERON:0002791;2.01e-07;32!UBERON:0001869;2.01e-07;32!UBERON:0001893;7.28e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,2.25e-16,1;UBERON:0009899,2.25e-16,1;UBERON:0002021,4.39e-13,5;UBERON:0001950,8.48e-12,20;UBERON:0002619,8.47e-11,22;UBERON:0000073,7.11e-10,53;UBERON:0002616,7.11e-10,53;UBERON:0000956,1.38e-09,25;UBERON:0000203,1.38e-09,25;UBERON:0001049,2.43e-09,56;UBERON:0005068,2.43e-09,56;UBERON:0006241,2.43e-09,56;UBERON:0007135,2.43e-09,56;UBERON:0002780,5.22e-09,41;UBERON:0001890,5.22e-09,41;UBERON:0003080,5.22e-09,41;UBERON:0006240,5.22e-09,41;UBERON:0000007,6.42e-09,2;UBERON:0000473,8.62e-09,8;UBERON:0007023,6.37e-08,114;UBERON:0002791,1.32e-07,32;UBERON:0001869,1.32e-07,32;UBERON:0000955,1.48e-07,68;UBERON:0006238,1.48e-07,68;UBERON:0003528,3.49e-07,34;UBERON:0002020,3.49e-07,34;UBERON:0001893,3.49e-07,34 | |||
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| ||
|short_description=p9@SSX2IP | |||
}} | }} |
Latest revision as of 12:23, 19 September 2015
Short description: | p9@SSX2IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SSX2IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_uc001dkg.2, uc001dkh.2, uc009wci.2, uc010orz.1_5end |
EntrezGene: | SSX2IP |
HGNC: | 16509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.08e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 2.25e-16 | 1 |
pole of cerebral hemisphere | 2.25e-16 | 1 |
occipital lobe | 4.39e-13 | 5 |
neocortex | 8.48e-12 | 20 |
regional part of cerebral cortex | 8.47e-11 | 22 |
regional part of nervous system | 7.11e-10 | 53 |
regional part of brain | 7.11e-10 | 53 |
cerebral cortex | 1.38e-09 | 25 |
pallium | 1.38e-09 | 25 |
neural tube | 2.43e-09 | 56 |
neural rod | 2.43e-09 | 56 |
future spinal cord | 2.43e-09 | 56 |
neural keel | 2.43e-09 | 56 |
regional part of forebrain | 5.22e-09 | 41 |
forebrain | 5.22e-09 | 41 |
anterior neural tube | 5.22e-09 | 41 |
future forebrain | 5.22e-09 | 41 |
pituitary gland | 6.42e-09 | 2 |
testis | 8.62e-09 | 8 |
adult organism | 6.37e-08 | 114 |
regional part of telencephalon | 1.32e-07 | 32 |
cerebral hemisphere | 1.32e-07 | 32 |
brain | 1.48e-07 | 68 |
future brain | 1.48e-07 | 68 |
brain grey matter | 3.49e-07 | 34 |
gray matter | 3.49e-07 | 34 |
telencephalon | 3.49e-07 | 34 |