FFCP PHASE1:Hg19::chr6:108882364..108882391,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2309 | |EntrezGene=2309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3821 | |HGNC=3821 | ||
|TSSclassifier=strong | |||
|UniProt=O43524 | |UniProt=O43524 | ||
|association_with_transcript=295bp_to_ENST00000406360,NM_001455,uc003psm.2_5end | |association_with_transcript=295bp_to_ENST00000406360,NM_001455,uc003psm.2_5end | ||
|cluster_id=chr6:108882364..108882391,+ | |||
|coexpression_cluster_id=C1047 | |coexpression_cluster_id=C1047 | ||
|description=CAGE_peak_4_at_FOXO3_5end | |description=CAGE_peak_4_at_FOXO3_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.37e-21!76;CL:0002057!2.25e-20!42;CL:0000860!1.20e-18!45;CL:0000839!5.51e-18!70;CL:0000557!1.03e-16!71;CL:0002009!3.50e-16!65;CL:0002194!1.22e-15!63;CL:0000576!1.22e-15!63;CL:0000040!1.22e-15!63;CL:0000559!1.22e-15!63;CL:0000763!9.61e-11!112;CL:0000049!9.61e-11!112;CL:0000094!8.93e-07!8 | |ontology_enrichment_celltype=CL:0000766!1.37e-21!76;CL:0002057!2.25e-20!42;CL:0000860!1.20e-18!45;CL:0000839!5.51e-18!70;CL:0000557!1.03e-16!71;CL:0002009!3.50e-16!65;CL:0002194!1.22e-15!63;CL:0000576!1.22e-15!63;CL:0000040!1.22e-15!63;CL:0000559!1.22e-15!63;CL:0000763!9.61e-11!112;CL:0000049!9.61e-11!112;CL:0000094!8.93e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.61e-29;33!CL:0002057;7.61e-29;33!CL:0000473;9.72e-22;39!CL:0000234;9.72e-22;39!CL:0000576;1.64e-20;48!CL:0000766;6.17e-19;69!CL:0000094;4.14e-12;8!CL:0000081;3.40e-08;11!CL:0000763;4.95e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;7.61e-29;33!CL:0002057;7.61e-29;33!CL:0000473;9.72e-22;39!CL:0000234;9.72e-22;39!CL:0000576;1.64e-20;48!CL:0000766;6.17e-19;69!CL:0000094;4.14e-12;8!CL:0000081;3.40e-08;11!CL:0000763;4.95e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.27e-40,72;CL:0000860,1.71e-32,42;CL:0002057,1.71e-32,42;CL:0000839,1.74e-32,66;CL:0000473,5.45e-30,48;CL:0000234,5.45e-30,48;CL:0000557,1.07e-29,67;CL:0000763,3.91e-27,108;CL:0000049,3.91e-27,108;CL:0002009,4.64e-27,61;CL:0002194,5.56e-27,59;CL:0000576,5.56e-27,59;CL:0000040,5.56e-27,59;CL:0000559,5.56e-27,59;CL:0000738,7.21e-18,136;CL:0000037,7.52e-14,168;CL:0002032,6.28e-13,161;CL:0000837,6.28e-13,161;CL:0002031,1.23e-12,120;CL:0000988,3.04e-12,177;CL:0000094,4.09e-12,8;CL:0002087,1.32e-10,115;CL:0000134,2.01e-08,354;CL:0002320,3.23e-08,361;CL:0000081,3.36e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.17e-23;42!CL:0000049;2.84e-08;108 | |ontology_enrichment_development_v019=CL:0002057;9.17e-23;42!CL:0000049;2.84e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-18!115;UBERON:0002390!2.12e-15!102;UBERON:0003061!2.12e-15!102;UBERON:0002193!8.78e-14!112;UBERON:0002371!1.28e-12!80;UBERON:0001474!2.16e-11!86;UBERON:0000468!6.43e-11!659;UBERON:0004765!5.96e-10!101;UBERON:0001434!5.96e-10!101;UBERON:0000480!8.44e-10!626;UBERON:0000467!9.00e-10!625;UBERON:0002405!2.23e-08!115;UBERON:0002050!2.26e-07!605;UBERON:0005423!2.26e-07!605;UBERON:0000922!2.39e-07!612;UBERON:0000062!2.85e-07!511;UBERON:0000923!3.18e-07!604;UBERON:0005291!3.18e-07!604;UBERON:0006598!3.18e-07!604;UBERON:0002532!3.18e-07!604 | |ontology_enrichment_uberon=UBERON:0007023!2.23e-18!115;UBERON:0002390!2.12e-15!102;UBERON:0003061!2.12e-15!102;UBERON:0002193!8.78e-14!112;UBERON:0002371!1.28e-12!80;UBERON:0001474!2.16e-11!86;UBERON:0000468!6.43e-11!659;UBERON:0004765!5.96e-10!101;UBERON:0001434!5.96e-10!101;UBERON:0000480!8.44e-10!626;UBERON:0000467!9.00e-10!625;UBERON:0002405!2.23e-08!115;UBERON:0002050!2.26e-07!605;UBERON:0005423!2.26e-07!605;UBERON:0000922!2.39e-07!612;UBERON:0000062!2.85e-07!511;UBERON:0000923!3.18e-07!604;UBERON:0005291!3.18e-07!604;UBERON:0006598!3.18e-07!604;UBERON:0002532!3.18e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-12;15!UBERON:0000179;1.02e-12;15!UBERON:0000463;1.02e-12;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-12;15!UBERON:0000179;1.02e-12;15!UBERON:0000463;1.02e-12;15 | ||
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|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,1.0007329835313,0.893922188854576,0,2.53299878168311,1.26343974685366,1.56711376919903,0.245733936501509,0,0.655324116390517,0.791300934685361,0.618831764800233,0.994192127183747,0.672325146451775,1.80808358407193,1.46062018077475,0.975865597581014,0.492484232307152,0,0,0,0.410623275218653,0.87879847716362,0,0,0,2.36018566109342,4.22212337906934,6.65709330259127,0,0.30120591877825,0.739508020333575,0,0,0,11.0799081706375,9.22504458362652,8.24641308720237,1.79132379391939,1.29557466407592,1.28787783817093,3.19876125315042,1.13362783106643,1.94067248950253,2.32429036905685,2.05583944010913,5.26500830521676,1.43846196161075,2.30544635876191,3.31075121844019,5.17118521104928,7.74581620300591,1.35426486594342,1.69418105588344,2.45615535052061,0.449446968890169,5.50951006267625,2.88836124368484,1.91801137739712,0.659702600373432,0.997318288108159,2.13112375266347,3.77272010217159,4.53908179752912,4.35975574296902,2.00998932205395,3.12889751052121,1.08594422352558,4.84319602106695,6.2607198117886,4.1140110367315,0.422510572623884,2.12604299965044,0.838634582033504,3.25753030324836,3.30389164251314,3.37523732063868,1.71007646244749,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0.383587685530591,0.722878304769133,1.50401373190767,0.434539556882471,0,1.45990461090791,0.283604451492204,0.221729397462564,0.087834785693126,0.654895377488563,0,1.48313777113772,0,0.870648686496336,0.26591592103773,0.715471872916026,0,0.371457501329565,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0.550236083880135,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0,0.44905874525234,0.112611480483322,1.53316637465883,0,0.183201743930407,9.22462922052443,3.87780264148325,0,0,0.506522046658319,1.05927344650575,0.573673241497627,1.06400514659507,0.560677600142307,0,0.49333509683432,0.622422070799533,0.67355336034844,0.653847612453835,1.05950199351452,1.15235184896,0.234321431833797,0.312160076830321,0,0.896692083310806,0.469737994575059,0.809364721840658,1.54495887372473,0.408308342509787,0.737005903870608,1.34323515528495,0,0.989067717114227,0.910161361938026,0.718618141816238,0.168336113954066,0.750711119231785,0.831192346452549,0,0,1.05166641234618,0.226864366320042,0.89694817844431,0.85422955527427,0.635795703478686,0.300091096084402,1.33968288009971,0,0.744467425326359,1.5189869901714,0.389748020644795,0.504867548488229,0.644349290496095,0.646584227275248,0.710019185033229,0.705264687593482,0.508681776931463,0.386521706326594,0.818238361772504,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0.252320850875628,0,1.56449532329816,0,0,0.928735856063958,0,0.236613600079688,0.337169380156203,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0.8231480226628,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.301586917234893,0.555530670951178,0.651616610620649,2.07986957055916,0,0.34779121492523,0.234817388471643,0,0,0.190254152234598,0,0,0.984868024349589,0.468008530278475,1.48631162288728,0,0.16798212819886,0.283550194484773,0.895585227028483,0.581267877027924,0,0,1.32072651019839,2.90259361757081,6.91775776401415,3.40854570251226,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.448524337381443,0,0.1466765716419,0.258543431515556,3.57656445851882,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.428933980974443,2.17048642156577,0,0.325736184293735,0.710783897485092,0,0.904318131178758,0.871533458600294,0.699810938274399,0,1.00451418286425,0,0.239624855491583,0,0,0.579125226670317,1.02738161275192,0.537182889719687,0,1.57624608161542,0.646882724578552,0.385029108839245,0.508189248444927,0,1.54657762555539,0,0,6.74106321552464,11.966458368161,7.45947924184864,0.24538298343828,1.50051156317903,0.813795071099207,1.45579603071565,0.535286966391485,0.788512075169673,1.17141414992713,0.902838299183157,0,0,0.664225598535437,0.737476674166813,0.347534457872331,0.195801157462741,0.343143423810856,2.27444828735176,2.15714200818617,3.09509917629989,0.303127571446259,0,0,0.992431231275107,1.07423381301644,0.841980283299221,0.768834895534206,1.02341449813341,1.12597744800525,0,1.07946785661859,0.355123450626254,0.739144404124282,1.03850885836724,0.697262270759755,0.120859449591622,1.20303882181971,0.276242966807689,0.803701137152247,0.728364672026868,0.393373244878272,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,3.06963827304308,3.66009631434861,0.512900250232778,0,0,0.618246069886334,0.27470839445503,0.82509499920588,0,0,0,0.676695028044854,0.154048617114644,0.460511024178389,0.413509717453592,0.429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| ||
|short_description=p4@FOXO3 | |short_description=p4@FOXO3 | ||
}} | }} |
Latest revision as of 17:34, 19 September 2015
Short description: | p4@FOXO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXO3_5end |
Coexpression cluster: | C1047_Whole_blood_CD14_Neutrophils_Eosinophils_Reticulocytes_Mast |
Association with transcript: | 295bp_to_ENST00000406360, NM_001455, uc003psm.2_5end |
EntrezGene: | FOXO3 |
HGNC: | 3821 |
UniProt: | O43524 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.27e-40 | 72 |
classical monocyte | 1.71e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-32 | 42 |
myeloid lineage restricted progenitor cell | 1.74e-32 | 66 |
defensive cell | 5.45e-30 | 48 |
phagocyte | 5.45e-30 | 48 |
granulocyte monocyte progenitor cell | 1.07e-29 | 67 |
myeloid cell | 3.91e-27 | 108 |
common myeloid progenitor | 3.91e-27 | 108 |
macrophage dendritic cell progenitor | 4.64e-27 | 61 |
monopoietic cell | 5.56e-27 | 59 |
monocyte | 5.56e-27 | 59 |
monoblast | 5.56e-27 | 59 |
promonocyte | 5.56e-27 | 59 |
leukocyte | 7.21e-18 | 136 |
hematopoietic stem cell | 7.52e-14 | 168 |
hematopoietic oligopotent progenitor cell | 6.28e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.28e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 1.23e-12 | 120 |
hematopoietic cell | 3.04e-12 | 177 |
granulocyte | 4.09e-12 | 8 |
nongranular leukocyte | 1.32e-10 | 115 |
mesenchymal cell | 2.01e-08 | 354 |
connective tissue cell | 3.23e-08 | 361 |
blood cell | 3.36e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.80e-32 | 98 |
blood island | 1.80e-32 | 98 |
hemolymphoid system | 1.25e-27 | 108 |
bone marrow | 2.31e-24 | 76 |
bone element | 1.28e-22 | 82 |
skeletal element | 2.50e-20 | 90 |
skeletal system | 1.29e-18 | 100 |
immune system | 3.97e-18 | 93 |
lateral plate mesoderm | 5.19e-14 | 203 |
blood | 9.43e-13 | 15 |
haemolymphatic fluid | 9.43e-13 | 15 |
organism substance | 9.43e-13 | 15 |
adult organism | 1.73e-12 | 114 |
mesoderm | 7.60e-10 | 315 |
mesoderm-derived structure | 7.60e-10 | 315 |
presumptive mesoderm | 7.60e-10 | 315 |
musculoskeletal system | 6.41e-09 | 167 |
connective tissue | 8.34e-08 | 371 |