FFCP PHASE1:Hg19::chr1:221862665..221862679,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:221862665..221862679,- | |||
|coexpression_cluster_id=C82 | |coexpression_cluster_id=C82 | ||
|description=CAGE_peak_at_chr1:221862665..221862679,- | |description=CAGE_peak_at_chr1:221862665..221862679,- | ||
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|ontology_enrichment_celltype=CL:0000738!7.17e-31!140;CL:0000037!5.27e-26!172;CL:0000566!5.27e-26!172;CL:0002032!6.03e-26!165;CL:0000837!6.03e-26!165;CL:0000988!5.51e-24!182;CL:0002031!4.64e-23!124;CL:0002057!2.16e-22!42;CL:0000763!4.65e-21!112;CL:0000049!4.65e-21!112;CL:0000860!1.42e-20!45;CL:0000766!7.89e-20!76;CL:0000557!1.53e-19!71;CL:0002087!6.51e-18!119;CL:0000453!1.85e-16!5;CL:0000839!3.97e-16!70;CL:0002009!6.04e-16!65;CL:0002194!4.74e-13!63;CL:0000576!4.74e-13!63;CL:0000040!4.74e-13!63;CL:0000559!4.74e-13!63;CL:0000767!1.30e-11!3;CL:0000623!1.55e-11!3;CL:0000825!1.55e-11!3;CL:0000791!2.07e-10!18;CL:0000789!2.07e-10!18;CL:0002420!2.07e-10!18;CL:0002419!2.07e-10!18;CL:0000790!2.07e-10!18;CL:0000990!5.51e-09!8;CL:0000134!6.97e-09!358;CL:0000624!8.11e-09!6;CL:0002393!1.26e-08!9;CL:0002397!1.26e-08!9;CL:0002320!1.65e-08!365;CL:0001014!4.56e-08!2;CL:0001016!4.56e-08!2;CL:0000451!2.78e-07!10;CL:0000219!3.39e-07!390;CL:0000084!4.14e-07!25;CL:0000827!4.14e-07!25;CL:0002274!8.91e-07!5;CL:0000457!8.91e-07!5;CL:0002191!8.91e-07!5;CL:0000097!8.91e-07!5;CL:0000831!8.91e-07!5;CL:0002028!8.91e-07!5 | |ontology_enrichment_celltype=CL:0000738!7.17e-31!140;CL:0000037!5.27e-26!172;CL:0000566!5.27e-26!172;CL:0002032!6.03e-26!165;CL:0000837!6.03e-26!165;CL:0000988!5.51e-24!182;CL:0002031!4.64e-23!124;CL:0002057!2.16e-22!42;CL:0000763!4.65e-21!112;CL:0000049!4.65e-21!112;CL:0000860!1.42e-20!45;CL:0000766!7.89e-20!76;CL:0000557!1.53e-19!71;CL:0002087!6.51e-18!119;CL:0000453!1.85e-16!5;CL:0000839!3.97e-16!70;CL:0002009!6.04e-16!65;CL:0002194!4.74e-13!63;CL:0000576!4.74e-13!63;CL:0000040!4.74e-13!63;CL:0000559!4.74e-13!63;CL:0000767!1.30e-11!3;CL:0000623!1.55e-11!3;CL:0000825!1.55e-11!3;CL:0000791!2.07e-10!18;CL:0000789!2.07e-10!18;CL:0002420!2.07e-10!18;CL:0002419!2.07e-10!18;CL:0000790!2.07e-10!18;CL:0000990!5.51e-09!8;CL:0000134!6.97e-09!358;CL:0000624!8.11e-09!6;CL:0002393!1.26e-08!9;CL:0002397!1.26e-08!9;CL:0002320!1.65e-08!365;CL:0001014!4.56e-08!2;CL:0001016!4.56e-08!2;CL:0000451!2.78e-07!10;CL:0000219!3.39e-07!390;CL:0000084!4.14e-07!25;CL:0000827!4.14e-07!25;CL:0002274!8.91e-07!5;CL:0000457!8.91e-07!5;CL:0002191!8.91e-07!5;CL:0000097!8.91e-07!5;CL:0000831!8.91e-07!5;CL:0002028!8.91e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000767;6.72e-29;3!CL:0000623;8.89e-29;3!CL:0001014;3.94e-19;2!CL:0001016;3.94e-19;2!CL:0000097;1.13e-16;5!CL:0000094;3.29e-11;8!CL:0000163;1.63e-09;9!CL:0000081;2.76e-08;11!CL:0000453;3.33e-08;5!CL:0000840;5.66e-07;5!CL:0002393;7.08e-07;6!CL:0002397;7.08e-07;6 | |ontology_enrichment_celltype_v019=CL:0000767;6.72e-29;3!CL:0000623;8.89e-29;3!CL:0001014;3.94e-19;2!CL:0001016;3.94e-19;2!CL:0000097;1.13e-16;5!CL:0000094;3.29e-11;8!CL:0000163;1.63e-09;9!CL:0000081;2.76e-08;11!CL:0000453;3.33e-08;5!CL:0000840;5.66e-07;5!CL:0002393;7.08e-07;6!CL:0002397;7.08e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000767,6.14e-29,3;CL:0000623,9.79e-29,3;CL:0000825,9.79e-29,3;CL:0001014,2.86e-19,2;CL:0001016,2.86e-19,2;CL:0000738,9.29e-19,136;CL:0000097,9.65e-17,5;CL:0002028,9.65e-17,5;CL:0000037,1.17e-14,168;CL:0000988,9.08e-14,177;CL:0002032,1.49e-13,161;CL:0000837,1.49e-13,161;CL:0002031,2.16e-12,120;CL:0000094,3.18e-11,8;CL:0000766,6.27e-11,72;CL:0000763,4.77e-10,108;CL:0000049,4.77e-10,108;CL:0000163,1.50e-09,9;CL:0000557,1.95e-09,67;CL:0000081,2.70e-08,11;CL:0000453,2.94e-08,5;CL:0000840,5.10e-07,5;CL:0001029,5.10e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-16!80;UBERON:0001474!4.17e-15!86;UBERON:0002390!3.96e-13!102;UBERON:0003061!3.96e-13!102;UBERON:0004765!5.31e-12!101;UBERON:0001434!5.31e-12!101;UBERON:0002193!2.03e-11!112;UBERON:0002405!7.65e-11!115;UBERON:0002384!5.35e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!1.11e-16!80;UBERON:0001474!4.17e-15!86;UBERON:0002390!3.96e-13!102;UBERON:0003061!3.96e-13!102;UBERON:0004765!5.31e-12!101;UBERON:0001434!5.31e-12!101;UBERON:0002193!2.03e-11!112;UBERON:0002405!7.65e-11!115;UBERON:0002384!5.35e-08!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.46e-08,76;UBERON:0002390,1.43e-07,98;UBERON:0003061,1.43e-07,98;UBERON:0001474,1.66e-07,82;UBERON:0002193,9.69e-07,108;UBERON:0004765,9.78e-07,90 | |||
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|short_description=p@chr1:221862665..221862679,- | |short_description=p@chr1:221862665..221862679,- | ||
}} | }} |
Latest revision as of 04:10, 28 July 2015
Short description: | p@chr1:221862665..221862679, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:221862665..221862679, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 6.14e-29 | 3 |
natural killer cell | 9.79e-29 | 3 |
pro-NK cell | 9.79e-29 | 3 |
CD1a-positive Langerhans cell | 2.86e-19 | 2 |
immature CD1a-positive Langerhans cell | 2.86e-19 | 2 |
leukocyte | 9.29e-19 | 136 |
mast cell | 9.65e-17 | 5 |
basophil mast progenitor cell | 9.65e-17 | 5 |
hematopoietic stem cell | 1.17e-14 | 168 |
hematopoietic cell | 9.08e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.49e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 2.16e-12 | 120 |
granulocyte | 3.18e-11 | 8 |
myeloid leukocyte | 6.27e-11 | 72 |
myeloid cell | 4.77e-10 | 108 |
common myeloid progenitor | 4.77e-10 | 108 |
endocrine cell | 1.50e-09 | 9 |
granulocyte monocyte progenitor cell | 1.95e-09 | 67 |
blood cell | 2.70e-08 | 11 |
Langerhans cell | 2.94e-08 | 5 |
immature conventional dendritic cell | 5.10e-07 | 5 |
common dendritic progenitor | 5.10e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.46e-08 | 76 |
hematopoietic system | 1.43e-07 | 98 |
blood island | 1.43e-07 | 98 |
bone element | 1.66e-07 | 82 |
hemolymphoid system | 9.69e-07 | 108 |
skeletal element | 9.78e-07 | 90 |