FFCP PHASE1:Hg19::chr16:450282..450324,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:450282..450324,+ | |||
|description=CAGE_peak_at_chr16:450282..450324,+ | |description=CAGE_peak_at_chr16:450282..450324,+ | ||
|id=chr16:450282..450324,+ | |id=chr16:450282..450324,+ | ||
|ontology_enrichment_celltype=CL:0002321!4.01e-12!248;CL:0000055!7.26e-12!180;CL:0000220!1.04e-11!246;CL:0000548!4.70e-10!679;CL:0000004!4.70e-10!679;CL:0000255!4.70e-10!679;CL:0000012!1.47e-09!682;CL:0000144!1.64e-09!625;CL:0000222!3.43e-09!119;CL:0000393!4.55e-08!60;CL:0000211!4.55e-08!60;CL:0002371!4.74e-08!591;CL:0000183!8.32e-08!59;CL:0000680!2.24e-07!57;CL:0000056!2.24e-07!57;CL:0000355!2.24e-07!57;CL:0000187!4.71e-07!54;CL:0000192!8.46e-07!42;CL:0000514!8.46e-07!42 | |ontology_enrichment_celltype=CL:0002321!4.01e-12!248;CL:0000055!7.26e-12!180;CL:0000220!1.04e-11!246;CL:0000548!4.70e-10!679;CL:0000004!4.70e-10!679;CL:0000255!4.70e-10!679;CL:0000012!1.47e-09!682;CL:0000144!1.64e-09!625;CL:0000222!3.43e-09!119;CL:0000393!4.55e-08!60;CL:0000211!4.55e-08!60;CL:0002371!4.74e-08!591;CL:0000183!8.32e-08!59;CL:0000680!2.24e-07!57;CL:0000056!2.24e-07!57;CL:0000355!2.24e-07!57;CL:0000187!4.71e-07!54;CL:0000192!8.46e-07!42;CL:0000514!8.46e-07!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.16e-10,250;CL:0000393,3.76e-08,61;CL:0000211,3.76e-08,61;CL:0000222,6.32e-08,121;CL:0000680,1.35e-07,58;CL:0000056,1.35e-07,58;CL:0000355,1.35e-07,58;CL:0000187,2.37e-07,55;CL:0000192,9.37e-07,43;CL:0000514,9.37e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.07e-09!143;UBERON:0002100!1.04e-08!216;UBERON:0000486!1.69e-08!82;UBERON:0000914!2.33e-08!83;UBERON:0002329!2.33e-08!83;UBERON:0003077!2.33e-08!83;UBERON:0003059!2.33e-08!83;UBERON:0007282!2.33e-08!83;UBERON:0009618!2.33e-08!83;UBERON:0007285!2.33e-08!83;UBERON:0004290!2.40e-08!70;UBERON:0001134!4.15e-07!61;UBERON:0002036!4.15e-07!61;UBERON:0003082!4.15e-07!61;UBERON:0002385!5.88e-07!63;UBERON:0001015!5.88e-07!63;UBERON:0000383!5.88e-07!63 | |ontology_enrichment_uberon=UBERON:0005256!1.07e-09!143;UBERON:0002100!1.04e-08!216;UBERON:0000486!1.69e-08!82;UBERON:0000914!2.33e-08!83;UBERON:0002329!2.33e-08!83;UBERON:0003077!2.33e-08!83;UBERON:0003059!2.33e-08!83;UBERON:0007282!2.33e-08!83;UBERON:0009618!2.33e-08!83;UBERON:0007285!2.33e-08!83;UBERON:0004290!2.40e-08!70;UBERON:0001134!4.15e-07!61;UBERON:0002036!4.15e-07!61;UBERON:0003082!4.15e-07!61;UBERON:0002385!5.88e-07!63;UBERON:0001015!5.88e-07!63;UBERON:0000383!5.88e-07!63 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.82e-10,78;UBERON:0005256,4.52e-10,122;UBERON:0003104,2.16e-09,160;UBERON:0009142,2.16e-09,160;UBERON:0000486,9.03e-09,83;UBERON:0007524,1.37e-08,73;UBERON:0002329,1.95e-08,71;UBERON:0003059,1.95e-08,71;UBERON:0007282,1.95e-08,71;UBERON:0004290,1.95e-08,71;UBERON:0009618,1.95e-08,71;UBERON:0003077,4.06e-08,72;UBERON:0007285,4.06e-08,72;UBERON:0002100,7.33e-08,199;UBERON:0002385,5.29e-07,64;UBERON:0001015,5.29e-07,64;UBERON:0000383,5.29e-07,64;UBERON:0000490,6.10e-07,148;UBERON:0001134,6.46e-07,62;UBERON:0002036,6.46e-07,62;UBERON:0003082,6.46e-07,62 | |||
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| ||
|short_description=p@chr16:450282..450324,+ | |short_description=p@chr16:450282..450324,+ | ||
}} | }} |
Latest revision as of 08:56, 25 July 2015
Short description: | p@chr16:450282..450324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:450282..450324, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.16e-10 | 250 |
electrically responsive cell | 3.76e-08 | 61 |
electrically active cell | 3.76e-08 | 61 |
mesodermal cell | 6.32e-08 | 121 |
muscle precursor cell | 1.35e-07 | 58 |
myoblast | 1.35e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-07 | 58 |
muscle cell | 2.37e-07 | 55 |
smooth muscle cell | 9.37e-07 | 43 |
smooth muscle myoblast | 9.37e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.82e-10 | 78 |
trunk mesenchyme | 4.52e-10 | 122 |
mesenchyme | 2.16e-09 | 160 |
entire embryonic mesenchyme | 2.16e-09 | 160 |
multilaminar epithelium | 9.03e-09 | 83 |
dense mesenchyme tissue | 1.37e-08 | 73 |
somite | 1.95e-08 | 71 |
presomitic mesoderm | 1.95e-08 | 71 |
presumptive segmental plate | 1.95e-08 | 71 |
dermomyotome | 1.95e-08 | 71 |
trunk paraxial mesoderm | 1.95e-08 | 71 |
paraxial mesoderm | 4.06e-08 | 72 |
presumptive paraxial mesoderm | 4.06e-08 | 72 |
trunk | 7.33e-08 | 199 |
muscle tissue | 5.29e-07 | 64 |
musculature | 5.29e-07 | 64 |
musculature of body | 5.29e-07 | 64 |
unilaminar epithelium | 6.10e-07 | 148 |
skeletal muscle tissue | 6.46e-07 | 62 |
striated muscle tissue | 6.46e-07 | 62 |
myotome | 6.46e-07 | 62 |