FFCP PHASE1:Hg19::chr6:151042296..151042316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57480 | |EntrezGene=57480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20884 | |HGNC=20884 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULL1 | |UniProt=Q9ULL1 | ||
|association_with_transcript=72bp_to_ENST00000358517_5end | |association_with_transcript=72bp_to_ENST00000358517_5end | ||
|cluster_id=chr6:151042296..151042316,+ | |||
|coexpression_cluster_id=C1711 | |coexpression_cluster_id=C1711 | ||
|description=CAGE_peak_8_at_PLEKHG1_5end | |description=CAGE_peak_8_at_PLEKHG1_5end | ||
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|ontology_enrichment_celltype=CL:0000128!1.82e-15!7;CL:0000126!1.82e-15!7;CL:0000127!1.82e-15!7;CL:0002453!1.82e-15!7;CL:0002319!2.33e-09!25;CL:0002605!4.08e-08!3;CL:0000064!6.37e-08!3;CL:0005012!6.37e-08!3;CL:0000067!6.37e-08!3;CL:0002304!6.37e-08!3;CL:0002603!6.73e-07!3;CL:0000047!7.15e-07!8 | |ontology_enrichment_celltype=CL:0000128!1.82e-15!7;CL:0000126!1.82e-15!7;CL:0000127!1.82e-15!7;CL:0002453!1.82e-15!7;CL:0002319!2.33e-09!25;CL:0002605!4.08e-08!3;CL:0000064!6.37e-08!3;CL:0005012!6.37e-08!3;CL:0000067!6.37e-08!3;CL:0002304!6.37e-08!3;CL:0002603!6.73e-07!3;CL:0000047!7.15e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000128;4.70e-33;7!CL:0000126;4.70e-33;7!CL:0000127;4.70e-33;7!CL:0002605;8.12e-29;3!CL:0000064;4.52e-28;3!CL:0000067;4.52e-28;3!CL:0005012;4.52e-28;3!CL:0002304;4.52e-28;3!CL:0002319;3.14e-26;25!CL:0000047;1.72e-19;2!CL:0000243;1.41e-13;15!CL:0000125;1.41e-13;15!CL:0000095;3.92e-12;17!CL:0000540;7.98e-07;6!CL:0000404;7.98e-07;6 | |ontology_enrichment_celltype_v019=CL:0000128;4.70e-33;7!CL:0000126;4.70e-33;7!CL:0000127;4.70e-33;7!CL:0002605;8.12e-29;3!CL:0000064;4.52e-28;3!CL:0000067;4.52e-28;3!CL:0005012;4.52e-28;3!CL:0002304;4.52e-28;3!CL:0002319;3.14e-26;25!CL:0000047;1.72e-19;2!CL:0000243;1.41e-13;15!CL:0000125;1.41e-13;15!CL:0000095;3.92e-12;17!CL:0000540;7.98e-07;6!CL:0000404;7.98e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.02e-33,7;CL:0000126,5.02e-33,7;CL:0000127,5.02e-33,7;CL:0002453,5.02e-33,7;CL:0002605,8.12e-29,3;CL:0000064,5.19e-28,3;CL:0000067,5.19e-28,3;CL:0005012,5.19e-28,3;CL:0002304,5.19e-28,3;CL:0002319,2.58e-26,25;CL:0000133,1.04e-19,59;CL:0000047,1.75e-18,8;CL:0000221,6.56e-16,72;CL:0000243,1.45e-13,15;CL:0000125,1.45e-13,15;CL:0000030,1.45e-13,15;CL:0000339,1.45e-13,15;CL:0000095,4.01e-12,17;CL:0000123,4.01e-12,17;CL:0000540,6.68e-07,6;CL:0000031,6.68e-07,6;CL:0000404,6.68e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000133;3.94e-14;59!CL:0000339;1.41e-13;15!CL:0000221;2.78e-08;72!CL:0000031;7.98e-07;6 | |ontology_enrichment_development_v019=CL:0000133;3.94e-14;59!CL:0000339;1.41e-13;15!CL:0000221;2.78e-08;72!CL:0000031;7.98e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.81e-10;1!DOID:4549;1.81e-10;1!DOID:5861;1.81e-10;1!DOID:6496;1.81e-10;1!DOID:0050619;3.29e-10;1!DOID:1357;3.29e-10;1 | |ontology_enrichment_disease_v019=DOID:3371;1.81e-10;1!DOID:4549;1.81e-10;1!DOID:5861;1.81e-10;1!DOID:6496;1.81e-10;1!DOID:0050619;3.29e-10;1!DOID:1357;3.29e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.73e-10,1;DOID:4549,1.73e-10,1;DOID:5861,1.73e-10,1;DOID:6496,1.73e-10,1;DOID:0050619,4.75e-10,1;DOID:1357,4.75e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.88e-36!82;UBERON:0001049!9.59e-35!57;UBERON:0005068!9.59e-35!57;UBERON:0006241!9.59e-35!57;UBERON:0007135!9.59e-35!57;UBERON:0005743!3.48e-34!86;UBERON:0002616!3.53e-33!59;UBERON:0000955!3.62e-30!69;UBERON:0006238!3.62e-30!69;UBERON:0000073!8.86e-30!94;UBERON:0001016!8.86e-30!94;UBERON:0003075!2.05e-29!86;UBERON:0007284!2.05e-29!86;UBERON:0002346!1.41e-27!90;UBERON:0000033!7.33e-23!123;UBERON:0002780!1.11e-22!41;UBERON:0001890!1.11e-22!41;UBERON:0006240!1.11e-22!41;UBERON:0000153!2.16e-22!129;UBERON:0007811!2.16e-22!129;UBERON:0003080!5.50e-22!42;UBERON:0002020!6.07e-22!34;UBERON:0003528!6.07e-22!34;UBERON:0001893!1.25e-21!34;UBERON:0003056!5.03e-21!61;UBERON:0002791!2.14e-20!33;UBERON:0001869!6.47e-19!32;UBERON:0004121!7.10e-19!169;UBERON:0000924!4.05e-18!173;UBERON:0006601!4.05e-18!173;UBERON:0000956!4.63e-16!25;UBERON:0000203!4.63e-16!25;UBERON:0007023!1.35e-15!115;UBERON:0004733!1.91e-15!12;UBERON:0002028!1.91e-15!12;UBERON:0007277!1.91e-15!12;UBERON:0003076!2.54e-14!15;UBERON:0003057!2.54e-14!15;UBERON:0004732!4.47e-14!13;UBERON:0002298!6.93e-12!8;UBERON:0002619!2.53e-11!22;UBERON:0002680!2.75e-10!9;UBERON:0001895!2.75e-10!9;UBERON:0010092!2.75e-10!9;UBERON:0000488!2.33e-09!4;UBERON:0001950!1.18e-08!20;UBERON:0001778!6.37e-08!3;UBERON:0001775!6.37e-08!3;UBERON:0002308!2.35e-07!9;UBERON:0000125!2.35e-07!9;UBERON:0000064!2.37e-07!219;UBERON:0001896!4.11e-07!3;UBERON:0005290!4.11e-07!3;UBERON:0010096!4.11e-07!3;UBERON:0000025!6.79e-07!194;UBERON:0006331!9.12e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!1.88e-36!82;UBERON:0001049!9.59e-35!57;UBERON:0005068!9.59e-35!57;UBERON:0006241!9.59e-35!57;UBERON:0007135!9.59e-35!57;UBERON:0005743!3.48e-34!86;UBERON:0002616!3.53e-33!59;UBERON:0000955!3.62e-30!69;UBERON:0006238!3.62e-30!69;UBERON:0000073!8.86e-30!94;UBERON:0001016!8.86e-30!94;UBERON:0003075!2.05e-29!86;UBERON:0007284!2.05e-29!86;UBERON:0002346!1.41e-27!90;UBERON:0000033!7.33e-23!123;UBERON:0002780!1.11e-22!41;UBERON:0001890!1.11e-22!41;UBERON:0006240!1.11e-22!41;UBERON:0000153!2.16e-22!129;UBERON:0007811!2.16e-22!129;UBERON:0003080!5.50e-22!42;UBERON:0002020!6.07e-22!34;UBERON:0003528!6.07e-22!34;UBERON:0001893!1.25e-21!34;UBERON:0003056!5.03e-21!61;UBERON:0002791!2.14e-20!33;UBERON:0001869!6.47e-19!32;UBERON:0004121!7.10e-19!169;UBERON:0000924!4.05e-18!173;UBERON:0006601!4.05e-18!173;UBERON:0000956!4.63e-16!25;UBERON:0000203!4.63e-16!25;UBERON:0007023!1.35e-15!115;UBERON:0004733!1.91e-15!12;UBERON:0002028!1.91e-15!12;UBERON:0007277!1.91e-15!12;UBERON:0003076!2.54e-14!15;UBERON:0003057!2.54e-14!15;UBERON:0004732!4.47e-14!13;UBERON:0002298!6.93e-12!8;UBERON:0002619!2.53e-11!22;UBERON:0002680!2.75e-10!9;UBERON:0001895!2.75e-10!9;UBERON:0010092!2.75e-10!9;UBERON:0000488!2.33e-09!4;UBERON:0001950!1.18e-08!20;UBERON:0001778!6.37e-08!3;UBERON:0001775!6.37e-08!3;UBERON:0002308!2.35e-07!9;UBERON:0000125!2.35e-07!9;UBERON:0000064!2.37e-07!219;UBERON:0001896!4.11e-07!3;UBERON:0005290!4.11e-07!3;UBERON:0010096!4.11e-07!3;UBERON:0000025!6.79e-07!194;UBERON:0006331!9.12e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.52e-28;3!UBERON:0001775;4.52e-28;3!UBERON:0000488;3.16e-21;4!UBERON:0002203;2.34e-14;6!UBERON:0001768;2.34e-14;6!UBERON:0002200;2.34e-14;6!UBERON:0007625;1.38e-13;11!UBERON:0001801;1.02e-10;14!UBERON:0001764;3.29e-10;1!UBERON:0001825;3.29e-10;1!UBERON:0006876;4.56e-08;11!UBERON:0000019;6.14e-08;19!UBERON:0000047;6.14e-08;19!UBERON:0004088;6.14e-08;19!UBERON:0010230;6.14e-08;19!UBERON:0000970;1.51e-07;20!UBERON:0002104;3.41e-07;21!UBERON:0001456;3.41e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0001778;4.52e-28;3!UBERON:0001775;4.52e-28;3!UBERON:0000488;3.16e-21;4!UBERON:0002203;2.34e-14;6!UBERON:0001768;2.34e-14;6!UBERON:0002200;2.34e-14;6!UBERON:0007625;1.38e-13;11!UBERON:0001801;1.02e-10;14!UBERON:0001764;3.29e-10;1!UBERON:0001825;3.29e-10;1!UBERON:0006876;4.56e-08;11!UBERON:0000019;6.14e-08;19!UBERON:0000047;6.14e-08;19!UBERON:0004088;6.14e-08;19!UBERON:0010230;6.14e-08;19!UBERON:0000970;1.51e-07;20!UBERON:0002104;3.41e-07;21!UBERON:0001456;3.41e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,5.19e-28,3;UBERON:0001775,5.19e-28,3;UBERON:0000488,3.51e-21,4;UBERON:0002203,2.51e-14,6;UBERON:0001768,2.51e-14,6;UBERON:0002200,2.51e-14,6;UBERON:0007625,1.45e-13,11;UBERON:0001017,1.36e-11,81;UBERON:0001801,1.06e-10,14;UBERON:0001016,2.75e-10,89;UBERON:0001764,4.75e-10,1;UBERON:0001825,4.75e-10,1;UBERON:0003075,1.70e-09,82;UBERON:0007284,1.70e-09,82;UBERON:0004121,2.58e-09,171;UBERON:0000924,2.58e-09,171;UBERON:0006601,2.58e-09,171;UBERON:0002346,5.44e-09,86;UBERON:0003056,1.70e-08,61;UBERON:0006876,4.73e-08,11;UBERON:0000019,1.55e-07,20;UBERON:0000047,1.55e-07,20;UBERON:0010312,1.55e-07,20;UBERON:0004088,1.55e-07,20;UBERON:0010230,1.55e-07,20;UBERON:0003072,1.55e-07,20;UBERON:0004128,1.55e-07,20;UBERON:0003071,1.55e-07,20;UBERON:0010371,3.43e-07,104;UBERON:0000970,3.49e-07,21;UBERON:0002104,3.49e-07,21;UBERON:0001456,7.32e-07,22 | |||
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| ||
|short_description=p8@PLEKHG1 | |short_description=p8@PLEKHG1 | ||
}} | }} |
Latest revision as of 04:11, 16 September 2015
Short description: | p8@PLEKHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PLEKHG1_5end |
Coexpression cluster: | C1711_astrocytoma_Astrocyte_Neural_Wilms_acute_Ciliary_Lens |
Association with transcript: | 72bp_to_ENST00000358517_5end |
EntrezGene: | PLEKHG1 |
HGNC: | 20884 |
UniProt: | Q9ULL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.02e-33 | 7 |
macroglial cell | 5.02e-33 | 7 |
astrocyte | 5.02e-33 | 7 |
oligodendrocyte precursor cell | 5.02e-33 | 7 |
astrocyte of the cerebral cortex | 8.12e-29 | 3 |
ciliated cell | 5.19e-28 | 3 |
ciliated epithelial cell | 5.19e-28 | 3 |
multi-ciliated epithelial cell | 5.19e-28 | 3 |
non-pigmented ciliary epithelial cell | 5.19e-28 | 3 |
neural cell | 2.58e-26 | 25 |
neurectodermal cell | 1.04e-19 | 59 |
neuronal stem cell | 1.75e-18 | 8 |
ectodermal cell | 6.56e-16 | 72 |
glial cell (sensu Vertebrata) | 1.45e-13 | 15 |
glial cell | 1.45e-13 | 15 |
glioblast | 1.45e-13 | 15 |
glioblast (sensu Vertebrata) | 1.45e-13 | 15 |
neuron associated cell | 4.01e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 4.01e-12 | 17 |
neuron | 6.68e-07 | 6 |
neuroblast | 6.68e-07 | 6 |
electrically signaling cell | 6.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 5.19e-28 | 3 |
ciliary body | 5.19e-28 | 3 |
atypical epithelium | 3.51e-21 | 4 |
vasculature of eye | 2.51e-14 | 6 |
uvea | 2.51e-14 | 6 |
vasculature of head | 2.51e-14 | 6 |
pigment epithelium of eye | 1.45e-13 | 11 |
central nervous system | 1.36e-11 | 81 |
anterior segment of eyeball | 1.06e-10 | 14 |
nervous system | 2.75e-10 | 89 |
maxillary sinus | 4.75e-10 | 1 |
paranasal sinus | 4.75e-10 | 1 |
neural plate | 1.70e-09 | 82 |
presumptive neural plate | 1.70e-09 | 82 |
ectoderm-derived structure | 2.58e-09 | 171 |
ectoderm | 2.58e-09 | 171 |
presumptive ectoderm | 2.58e-09 | 171 |
neurectoderm | 5.44e-09 | 86 |
pre-chordal neural plate | 1.70e-08 | 61 |
vasculature of organ | 4.73e-08 | 11 |
camera-type eye | 1.55e-07 | 20 |
simple eye | 1.55e-07 | 20 |
immature eye | 1.55e-07 | 20 |
ocular region | 1.55e-07 | 20 |
eyeball of camera-type eye | 1.55e-07 | 20 |
optic cup | 1.55e-07 | 20 |
optic vesicle | 1.55e-07 | 20 |
eye primordium | 1.55e-07 | 20 |
ecto-epithelium | 3.43e-07 | 104 |
eye | 3.49e-07 | 21 |
visual system | 3.49e-07 | 21 |
face | 7.32e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.73e-10 | 1 |
extraosseous chondrosarcoma | 1.73e-10 | 1 |
myxoid chondrosarcoma | 1.73e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.73e-10 | 1 |
paranasal sinus cancer | 4.75e-10 | 1 |
maxillary sinus cancer | 4.75e-10 | 1 |