FFCP PHASE1:Hg19::chr11:34218778..34218792,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:34218778..34218792,+ | |||
|coexpression_cluster_id=C202 | |coexpression_cluster_id=C202 | ||
|description=CAGE_peak_at_chr11:34218778..34218792,+ | |description=CAGE_peak_at_chr11:34218778..34218792,+ | ||
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|ontology_enrichment_celltype=CL:0002322!9.20e-30!5;CL:0002623!2.26e-28!3;CL:0000622!2.75e-17!5;CL:0000154!1.66e-14!6;CL:0000946!1.43e-10!1;CL:0000786!1.43e-10!1;CL:0000980!1.43e-10!1;CL:0002568!3.61e-10!1;CL:0000150!7.53e-10!9;CL:0000148!6.86e-09!10;CL:0000541!6.86e-09!10;CL:0000082!6.20e-08!19 | |ontology_enrichment_celltype=CL:0002322!9.20e-30!5;CL:0002623!2.26e-28!3;CL:0000622!2.75e-17!5;CL:0000154!1.66e-14!6;CL:0000946!1.43e-10!1;CL:0000786!1.43e-10!1;CL:0000980!1.43e-10!1;CL:0002568!3.61e-10!1;CL:0000150!7.53e-10!9;CL:0000148!6.86e-09!10;CL:0000541!6.86e-09!10;CL:0000082!6.20e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.11e-45;5!CL:0002623;5.25e-43;3!CL:0000622;3.94e-26;5!CL:0000154;6.70e-22;6!CL:0000946;1.78e-15;1!CL:0000786;1.78e-15;1!CL:0002321;2.02e-15;15!CL:0000150;7.89e-15;9!CL:0000148;2.16e-13;10!CL:0000147;9.81e-10;14!CL:0000082;2.22e-07;19!CL:0002251;5.56e-07;20!CL:0000710;5.68e-07;20 | |ontology_enrichment_celltype_v019=CL:0002322;2.11e-45;5!CL:0002623;5.25e-43;3!CL:0000622;3.94e-26;5!CL:0000154;6.70e-22;6!CL:0000946;1.78e-15;1!CL:0000786;1.78e-15;1!CL:0002321;2.02e-15;15!CL:0000150;7.89e-15;9!CL:0000148;2.16e-13;10!CL:0000147;9.81e-10;14!CL:0000082;2.22e-07;19!CL:0002251;5.56e-07;20!CL:0000710;5.68e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.99e-45,5;CL:0002623,4.55e-43,3;CL:0000622,3.62e-26,5;CL:0000154,6.23e-22,6;CL:0000946,1.78e-15,1;CL:0000786,1.78e-15,1;CL:0000980,1.78e-15,1;CL:0000150,7.53e-15,9;CL:0000148,2.16e-13,10;CL:0000541,2.16e-13,10;CL:0000147,9.81e-10,14;CL:0000785,2.15e-08,2;CL:0000955,2.15e-08,2;CL:0000818,2.15e-08,2;CL:0000954,2.15e-08,2;CL:0000816,2.15e-08,2;CL:0000082,2.27e-07,19;CL:0002251,5.45e-07,20;CL:0000710,5.68e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000954;2.15e-08;2 | |ontology_enrichment_development_v019=CL:0000954;2.15e-08;2 | ||
|ontology_enrichment_disease=DOID:5409!5.30e-21!4;DOID:3905!1.51e-16!9;DOID:1325!2.92e-12!7;DOID:3904!2.92e-12!7;DOID:1324!5.20e-10!15;DOID:0050615!2.15e-09!16 | |ontology_enrichment_disease=DOID:5409!5.30e-21!4;DOID:3905!1.51e-16!9;DOID:1325!2.92e-12!7;DOID:3904!2.92e-12!7;DOID:1324!5.20e-10!15;DOID:0050615!2.15e-09!16 | ||
|ontology_enrichment_disease_v019=DOID:5409;3.42e-15;4!DOID:3905;5.94e-15;9!DOID:1324;3.30e-09;15!DOID:1325;4.39e-09;7!DOID:3904;4.39e-09;7!DOID:0050615;1.15e-08;16 | |ontology_enrichment_disease_v019=DOID:5409;3.42e-15;4!DOID:3905;5.94e-15;9!DOID:1324;3.30e-09;15!DOID:1325;4.39e-09;7!DOID:3904;4.39e-09;7!DOID:0050615;1.15e-08;16 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,3.67e-15,4;DOID:3905,6.23e-15,9;DOID:1324,3.39e-09,15;DOID:1325,4.57e-09,7;DOID:3904,4.57e-09,7;DOID:0050615,1.18e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0001044!1.66e-14!6;UBERON:0003293!1.66e-14!6;UBERON:0003294!1.66e-14!6;UBERON:0010047!1.66e-14!6;UBERON:0000167!1.66e-14!6;UBERON:0003408!6.50e-09!10;UBERON:0004802!6.20e-08!19;UBERON:0000115!6.20e-08!19;UBERON:0002048!7.21e-07!22;UBERON:0000117!7.21e-07!22;UBERON:0000171!7.21e-07!22;UBERON:0000170!7.21e-07!22;UBERON:0005597!7.21e-07!22;UBERON:0000118!7.21e-07!22 | |ontology_enrichment_uberon=UBERON:0001044!1.66e-14!6;UBERON:0003293!1.66e-14!6;UBERON:0003294!1.66e-14!6;UBERON:0010047!1.66e-14!6;UBERON:0000167!1.66e-14!6;UBERON:0003408!6.50e-09!10;UBERON:0004802!6.20e-08!19;UBERON:0000115!6.20e-08!19;UBERON:0002048!7.21e-07!22;UBERON:0000117!7.21e-07!22;UBERON:0000171!7.21e-07!22;UBERON:0000170!7.21e-07!22;UBERON:0005597!7.21e-07!22;UBERON:0000118!7.21e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;6.70e-22;6!UBERON:0003293;6.70e-22;6!UBERON:0003294;6.70e-22;6!UBERON:0010047;6.70e-22;6!UBERON:0003408;6.70e-22;6!UBERON:0000167;6.70e-22;6!UBERON:0001041;9.52e-10;14!UBERON:0004802;2.22e-07;19!UBERON:0000115;2.22e-07;19!UBERON:0000161;2.54e-07;19!UBERON:0000166;2.54e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0001044;6.70e-22;6!UBERON:0003293;6.70e-22;6!UBERON:0003294;6.70e-22;6!UBERON:0010047;6.70e-22;6!UBERON:0003408;6.70e-22;6!UBERON:0000167;6.70e-22;6!UBERON:0001041;9.52e-10;14!UBERON:0004802;2.22e-07;19!UBERON:0000115;2.22e-07;19!UBERON:0000161;2.54e-07;19!UBERON:0000166;2.54e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,6.23e-22,6;UBERON:0003293,6.23e-22,6;UBERON:0003294,6.23e-22,6;UBERON:0010047,6.23e-22,6;UBERON:0000167,6.23e-22,6;UBERON:0003408,1.99e-13,10;UBERON:0004802,2.27e-07,19;UBERON:0000115,2.27e-07,19 | |||
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|short_description=p@chr11:34218778..34218792,+ | |short_description=p@chr11:34218778..34218792,+ | ||
}} | }} |
Latest revision as of 21:43, 23 July 2015
Short description: | p@chr11:34218778..34218792, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:34218778..34218792, + |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.99e-45 | 5 |
acinar cell of salivary gland | 4.55e-43 | 3 |
acinar cell | 3.62e-26 | 5 |
protein secreting cell | 6.23e-22 | 6 |
antibody secreting cell | 1.78e-15 | 1 |
plasma cell | 1.78e-15 | 1 |
plasmablast | 1.78e-15 | 1 |
glandular epithelial cell | 7.53e-15 | 9 |
melanocyte | 2.16e-13 | 10 |
melanoblast | 2.16e-13 | 10 |
pigment cell | 9.81e-10 | 14 |
mature B cell | 2.15e-08 | 2 |
pre-B-II cell | 2.15e-08 | 2 |
transitional stage B cell | 2.15e-08 | 2 |
small pre-B-II cell | 2.15e-08 | 2 |
immature B cell | 2.15e-08 | 2 |
epithelial cell of lung | 2.27e-07 | 19 |
epithelial cell of alimentary canal | 5.45e-07 | 20 |
neurecto-epithelial cell | 5.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 6.23e-22 | 6 |
gland of oral region | 6.23e-22 | 6 |
gland of foregut | 6.23e-22 | 6 |
oral gland | 6.23e-22 | 6 |
oral cavity | 6.23e-22 | 6 |
gland of gut | 1.99e-13 | 10 |
respiratory tract epithelium | 2.27e-07 | 19 |
lung epithelium | 2.27e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.67e-15 | 4 |
lung carcinoma | 6.23e-15 | 9 |
lung cancer | 3.39e-09 | 15 |
bronchus cancer | 4.57e-09 | 7 |
bronchogenic carcinoma | 4.57e-09 | 7 |
respiratory system cancer | 1.18e-08 | 16 |