FFCP PHASE1:Hg19::chr10:78900413..78900422,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:78900413..78900422,- | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_at_chr10:78900413..78900422,- | |description=CAGE_peak_at_chr10:78900413..78900422,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.96e-14;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.96e-14;3 | ||
|ontology_enrichment_disease=DOID:2355!3.16e-29!1;DOID:74!2.37e-15!2;DOID:1287!2.43e-08!4 | |ontology_enrichment_disease=DOID:2355!3.16e-29!1;DOID:74!2.37e-15!2;DOID:1287!2.43e-08!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.51e-57!2;UBERON:0002757!1.51e-57!2;UBERON:0010134!1.51e-57!2;UBERON:0002784!1.51e-57!2;UBERON:0005408!1.51e-57!2;UBERON:0001899!1.51e-57!2;UBERON:0003296!2.06e-29!4;UBERON:0010133!2.06e-29!4;UBERON:0001894!2.67e-17!7;UBERON:0006222!2.67e-17!7;UBERON:0000966!6.04e-07!5;UBERON:0005388!6.04e-07!5;UBERON:0001802!6.04e-07!5 | |ontology_enrichment_uberon=UBERON:0001905!1.51e-57!2;UBERON:0002757!1.51e-57!2;UBERON:0010134!1.51e-57!2;UBERON:0002784!1.51e-57!2;UBERON:0005408!1.51e-57!2;UBERON:0001899!1.51e-57!2;UBERON:0003296!2.06e-29!4;UBERON:0010133!2.06e-29!4;UBERON:0001894!2.67e-17!7;UBERON:0006222!2.67e-17!7;UBERON:0000966!6.04e-07!5;UBERON:0005388!6.04e-07!5;UBERON:0001802!6.04e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0000966;3.35e-09;5!UBERON:0005388;3.35e-09;5!UBERON:0001802;3.35e-09;5!UBERON:0000970;6.69e-09;20!UBERON:0002104;1.59e-08;21!UBERON:0000020;7.23e-08;23!UBERON:0001032;1.40e-07;24!UBERON:0004456;1.40e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0000966;3.35e-09;5!UBERON:0005388;3.35e-09;5!UBERON:0001802;3.35e-09;5!UBERON:0000970;6.69e-09;20!UBERON:0002104;1.59e-08;21!UBERON:0000020;7.23e-08;23!UBERON:0001032;1.40e-07;24!UBERON:0004456;1.40e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0000970,1.59e-08,21;UBERON:0002104,1.59e-08,21;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0000020,1.40e-07,24;UBERON:0001032,1.40e-07,24;UBERON:0004456,1.40e-07,24 | |||
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|short_description=p@chr10:78900413..78900422,- | |short_description=p@chr10:78900413..78900422,- | ||
}} | }} |
Latest revision as of 15:46, 23 July 2015
Short description: | p@chr10:78900413..78900422, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:78900413..78900422, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
eye | 1.59e-08 | 21 |
visual system | 1.59e-08 | 21 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
sense organ | 1.40e-07 | 24 |
sensory system | 1.40e-07 | 24 |
entire sense organ system | 1.40e-07 | 24 |