FFCP PHASE1:Hg19::chr8:48319394..48319421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:48319394..48319421,+ | |||
|coexpression_cluster_id=C2533 | |coexpression_cluster_id=C2533 | ||
|description=CAGE_peak_at_chr8:48319394..48319421,+ | |description=CAGE_peak_at_chr8:48319394..48319421,+ | ||
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|ontology_enrichment_development_v019=CL:0002057;5.79e-26;42!CL:0000049;9.04e-10;108 | |ontology_enrichment_development_v019=CL:0002057;5.79e-26;42!CL:0000049;9.04e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.05e-60!102;UBERON:0003061!2.05e-60!102;UBERON:0002193!1.37e-55!112;UBERON:0002371!6.05e-47!80;UBERON:0001474!9.14e-43!86;UBERON:0004765!1.73e-34!101;UBERON:0001434!1.73e-34!101;UBERON:0002405!3.87e-33!115;UBERON:0003081!3.35e-20!216;UBERON:0002204!6.99e-16!167;UBERON:0000178!7.76e-15!15;UBERON:0000179!7.76e-15!15;UBERON:0000463!7.76e-15!15;UBERON:0002384!3.83e-12!375 | |ontology_enrichment_uberon=UBERON:0002390!2.05e-60!102;UBERON:0003061!2.05e-60!102;UBERON:0002193!1.37e-55!112;UBERON:0002371!6.05e-47!80;UBERON:0001474!9.14e-43!86;UBERON:0004765!1.73e-34!101;UBERON:0001434!1.73e-34!101;UBERON:0002405!3.87e-33!115;UBERON:0003081!3.35e-20!216;UBERON:0002204!6.99e-16!167;UBERON:0000178!7.76e-15!15;UBERON:0000179!7.76e-15!15;UBERON:0000463!7.76e-15!15;UBERON:0002384!3.83e-12!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.37e-26;15!UBERON:0000179;2.37e-26;15!UBERON:0000463;2.37e-26;15!UBERON:0002390;4.26e-11;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.37e-26;15!UBERON:0000179;2.37e-26;15!UBERON:0000463;2.37e-26;15!UBERON:0002390;4.26e-11;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.10e-39,98;UBERON:0003061,1.10e-39,98;UBERON:0002193,1.85e-35,108;UBERON:0000178,1.43e-26,15;UBERON:0000179,1.43e-26,15;UBERON:0000463,1.43e-26,15;UBERON:0002371,6.85e-24,76;UBERON:0001474,8.04e-22,82;UBERON:0004765,1.73e-19,90;UBERON:0002405,1.03e-18,93;UBERON:0001434,4.30e-17,100;UBERON:0003081,5.87e-16,203;UBERON:0002204,1.88e-08,167;UBERON:0000926,4.85e-08,315;UBERON:0004120,4.85e-08,315;UBERON:0006603,4.85e-08,315;UBERON:0002384,6.38e-08,371 | |||
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|short_description=p@chr8:48319394..48319421,+ | |short_description=p@chr8:48319394..48319421,+ | ||
}} | }} |
Latest revision as of 18:40, 31 July 2015
Short description: | p@chr8:48319394..48319421, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:48319394..48319421, + |
Coexpression cluster: | C2533_CD14_Neutrophils_Whole_Eosinophils_blood_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.94e-48 | 72 |
myeloid cell | 3.21e-35 | 108 |
common myeloid progenitor | 3.21e-35 | 108 |
classical monocyte | 1.02e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-34 | 42 |
defensive cell | 1.55e-33 | 48 |
phagocyte | 1.55e-33 | 48 |
monopoietic cell | 5.26e-32 | 59 |
monocyte | 5.26e-32 | 59 |
monoblast | 5.26e-32 | 59 |
promonocyte | 5.26e-32 | 59 |
macrophage dendritic cell progenitor | 8.06e-31 | 61 |
granulocyte | 1.74e-30 | 8 |
myeloid lineage restricted progenitor cell | 3.64e-28 | 66 |
granulocyte monocyte progenitor cell | 1.11e-27 | 67 |
leukocyte | 1.13e-26 | 136 |
hematopoietic stem cell | 6.89e-24 | 168 |
hematopoietic cell | 2.42e-22 | 177 |
blood cell | 6.18e-22 | 11 |
hematopoietic oligopotent progenitor cell | 1.33e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-21 | 161 |
nongranular leukocyte | 1.23e-17 | 115 |
neutrophil | 2.78e-16 | 3 |
hematopoietic lineage restricted progenitor cell | 1.69e-13 | 120 |
eosinophil | 2.57e-11 | 2 |
mesenchymal cell | 1.25e-08 | 354 |
connective tissue cell | 2.49e-08 | 361 |
single nucleate cell | 1.29e-07 | 3 |
mononuclear cell | 1.29e-07 | 3 |
basophil | 1.53e-07 | 3 |
motile cell | 2.81e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.10e-39 | 98 |
blood island | 1.10e-39 | 98 |
hemolymphoid system | 1.85e-35 | 108 |
blood | 1.43e-26 | 15 |
haemolymphatic fluid | 1.43e-26 | 15 |
organism substance | 1.43e-26 | 15 |
bone marrow | 6.85e-24 | 76 |
bone element | 8.04e-22 | 82 |
skeletal element | 1.73e-19 | 90 |
immune system | 1.03e-18 | 93 |
skeletal system | 4.30e-17 | 100 |
lateral plate mesoderm | 5.87e-16 | 203 |
musculoskeletal system | 1.88e-08 | 167 |
mesoderm | 4.85e-08 | 315 |
mesoderm-derived structure | 4.85e-08 | 315 |
presumptive mesoderm | 4.85e-08 | 315 |
connective tissue | 6.38e-08 | 371 |