FFCP PHASE1:Hg19::chr15:38420737..38420743,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:38420737..38420743,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr15:38420737..38420743,+ | |description=CAGE_peak_at_chr15:38420737..38420743,+ | ||
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|ontology_enrichment_celltype=CL:0002057!1.44e-61!42;CL:0000860!5.02e-57!45;CL:0002009!1.52e-46!65;CL:0002194!1.15e-44!63;CL:0000576!1.15e-44!63;CL:0000040!1.15e-44!63;CL:0000559!1.15e-44!63;CL:0000557!4.57e-42!71;CL:0000839!1.43e-39!70;CL:0000766!6.04e-36!76;CL:0000763!3.29e-24!112;CL:0000049!3.29e-24!112;CL:0002087!4.78e-24!119;CL:0002031!6.54e-23!124;CL:0000738!5.21e-21!140;CL:0000037!9.35e-16!172;CL:0000566!9.35e-16!172;CL:0002032!1.80e-15!165;CL:0000837!1.80e-15!165;CL:0000988!1.71e-14!182;CL:0000134!4.19e-08!358;CL:0002320!8.65e-08!365 | |ontology_enrichment_celltype=CL:0002057!1.44e-61!42;CL:0000860!5.02e-57!45;CL:0002009!1.52e-46!65;CL:0002194!1.15e-44!63;CL:0000576!1.15e-44!63;CL:0000040!1.15e-44!63;CL:0000559!1.15e-44!63;CL:0000557!4.57e-42!71;CL:0000839!1.43e-39!70;CL:0000766!6.04e-36!76;CL:0000763!3.29e-24!112;CL:0000049!3.29e-24!112;CL:0002087!4.78e-24!119;CL:0002031!6.54e-23!124;CL:0000738!5.21e-21!140;CL:0000037!9.35e-16!172;CL:0000566!9.35e-16!172;CL:0002032!1.80e-15!165;CL:0000837!1.80e-15!165;CL:0000988!1.71e-14!182;CL:0000134!4.19e-08!358;CL:0002320!8.65e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-71;33!CL:0002057;2.24e-71;33!CL:0000473;4.65e-51;39!CL:0000234;4.65e-51;39!CL:0000576;1.01e-32;48!CL:0000766;2.26e-19;69!CL:0002591;7.68e-13;1!CL:0002087;7.42e-11;104!CL:0000763;5.71e-10;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.24e-71;33!CL:0002057;2.24e-71;33!CL:0000473;4.65e-51;39!CL:0000234;4.65e-51;39!CL:0000576;1.01e-32;48!CL:0000766;2.26e-19;69!CL:0002591;7.68e-13;1!CL:0002087;7.42e-11;104!CL:0000763;5.71e-10;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.97e-61,42;CL:0002057,8.97e-61,42;CL:0000473,5.63e-53,48;CL:0000234,5.63e-53,48;CL:0002194,4.74e-42,59;CL:0000576,4.74e-42,59;CL:0000040,4.74e-42,59;CL:0000559,4.74e-42,59;CL:0002009,1.22e-40,61;CL:0000839,1.76e-37,66;CL:0000557,6.63e-37,67;CL:0000766,2.93e-34,72;CL:0000763,2.34e-22,108;CL:0000049,2.34e-22,108;CL:0002087,6.76e-21,115;CL:0002031,5.89e-20,120;CL:0000738,2.09e-17,136;CL:0002032,2.01e-14,161;CL:0000837,2.01e-14,161;CL:0000037,9.56e-14,168;CL:0000988,5.95e-13,177;CL:0002591,1.09e-12,1 | |||
|ontology_enrichment_development_v019=CL:0002057;5.49e-40;42 | |ontology_enrichment_development_v019=CL:0002057;5.49e-40;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.44e-39!80;UBERON:0001474!4.05e-36!86;UBERON:0002390!1.59e-31!102;UBERON:0003061!1.59e-31!102;UBERON:0004765!1.00e-29!101;UBERON:0001434!1.00e-29!101;UBERON:0002193!4.55e-28!112;UBERON:0002405!2.97e-27!115;UBERON:0002204!7.04e-18!167;UBERON:0003081!2.48e-15!216;UBERON:0002384!2.32e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!2.44e-39!80;UBERON:0001474!4.05e-36!86;UBERON:0002390!1.59e-31!102;UBERON:0003061!1.59e-31!102;UBERON:0004765!1.00e-29!101;UBERON:0001434!1.00e-29!101;UBERON:0002193!4.55e-28!112;UBERON:0002405!2.97e-27!115;UBERON:0002204!7.04e-18!167;UBERON:0003081!2.48e-15!216;UBERON:0002384!2.32e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;4.69e-07;2!UBERON:0002012;4.69e-07;2!UBERON:0008886;4.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000078;4.69e-07;2!UBERON:0002012;4.69e-07;2!UBERON:0008886;4.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.17e-32,76;UBERON:0001474,6.37e-30,82;UBERON:0004765,3.89e-27,90;UBERON:0002405,3.26e-26,93;UBERON:0002390,8.47e-25,98;UBERON:0003061,8.47e-25,98;UBERON:0001434,2.85e-24,100;UBERON:0002193,2.34e-22,108;UBERON:0002204,6.35e-16,167;UBERON:0003081,9.26e-13,203;UBERON:0000926,1.75e-07,315;UBERON:0004120,1.75e-07,315;UBERON:0006603,1.75e-07,315;UBERON:0000078,5.60e-07,2;UBERON:0007497,5.60e-07,2;UBERON:0003643,5.60e-07,2;UBERON:0003504,5.60e-07,2;UBERON:0003469,5.60e-07,2;UBERON:0003496,5.60e-07,2;UBERON:0002012,5.60e-07,2;UBERON:0008886,5.60e-07,2;UBERON:0007303,5.60e-07,2;UBERON:0002061,5.60e-07,2;UBERON:0005432,5.60e-07,2;UBERON:0004363,5.60e-07,2 | |||
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|short_description=p@chr15:38420737..38420743,+ | |short_description=p@chr15:38420737..38420743,+ | ||
}} | }} |
Latest revision as of 01:06, 25 July 2015
Short description: | p@chr15:38420737..38420743, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:38420737..38420743, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.97e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.97e-61 | 42 |
defensive cell | 5.63e-53 | 48 |
phagocyte | 5.63e-53 | 48 |
monopoietic cell | 4.74e-42 | 59 |
monocyte | 4.74e-42 | 59 |
monoblast | 4.74e-42 | 59 |
promonocyte | 4.74e-42 | 59 |
macrophage dendritic cell progenitor | 1.22e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-37 | 66 |
granulocyte monocyte progenitor cell | 6.63e-37 | 67 |
myeloid leukocyte | 2.93e-34 | 72 |
myeloid cell | 2.34e-22 | 108 |
common myeloid progenitor | 2.34e-22 | 108 |
nongranular leukocyte | 6.76e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.89e-20 | 120 |
leukocyte | 2.09e-17 | 136 |
hematopoietic oligopotent progenitor cell | 2.01e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-14 | 161 |
hematopoietic stem cell | 9.56e-14 | 168 |
hematopoietic cell | 5.95e-13 | 177 |
smooth muscle cell of the pulmonary artery | 1.09e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.17e-32 | 76 |
bone element | 6.37e-30 | 82 |
skeletal element | 3.89e-27 | 90 |
immune system | 3.26e-26 | 93 |
hematopoietic system | 8.47e-25 | 98 |
blood island | 8.47e-25 | 98 |
skeletal system | 2.85e-24 | 100 |
hemolymphoid system | 2.34e-22 | 108 |
musculoskeletal system | 6.35e-16 | 167 |
lateral plate mesoderm | 9.26e-13 | 203 |
mesoderm | 1.75e-07 | 315 |
mesoderm-derived structure | 1.75e-07 | 315 |
presumptive mesoderm | 1.75e-07 | 315 |
mixed ectoderm/mesoderm/endoderm-derived structure | 5.60e-07 | 2 |
developing epithelial placode | 5.60e-07 | 2 |
respiratory system arterial blood vessel | 5.60e-07 | 2 |
respiratory system blood vessel | 5.60e-07 | 2 |
respiratory system artery | 5.60e-07 | 2 |
head blood vessel | 5.60e-07 | 2 |
pulmonary artery | 5.60e-07 | 2 |
pulmonary vascular system | 5.60e-07 | 2 |
pharyngeal vasculature | 5.60e-07 | 2 |
truncus arteriosus | 5.60e-07 | 2 |
aortic sac | 5.60e-07 | 2 |
pharyngeal arch artery | 5.60e-07 | 2 |