FFCP PHASE1:Hg19::chr3:78684991..78684993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:78684991..78684993,- | |||
|coexpression_cluster_id=C788 | |coexpression_cluster_id=C788 | ||
|description=CAGE_peak_at_chr3:78684991..78684993,- | |description=CAGE_peak_at_chr3:78684991..78684993,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.37e-99;1 | |ontology_enrichment_development_v019=UBERON:0000358;9.37e-99;1 | ||
|ontology_enrichment_disease=DOID:154!1.72e-10!2;DOID:4236!1.72e-10!2 | |ontology_enrichment_disease=DOID:154!1.72e-10!2;DOID:4236!1.72e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:5409;7.14e-26;4!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |ontology_enrichment_disease_v019=DOID:5409;7.14e-26;4!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,7.14e-26,4;DOID:1325,1.91e-15,7;DOID:3904,1.91e-15,7;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001873!2.99e-10!2;UBERON:0010122!2.99e-10!2;UBERON:0002771!2.79e-07!3;UBERON:0005383!2.97e-07!3;UBERON:0005382!2.97e-07!3 | |ontology_enrichment_uberon=UBERON:0001873!2.99e-10!2;UBERON:0010122!2.99e-10!2;UBERON:0002771!2.79e-07!3;UBERON:0005383!2.97e-07!3;UBERON:0005382!2.97e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.73e-11;10 | |ontology_enrichment_uberon_v019=UBERON:0002331;2.73e-11;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.73e-11,10;UBERON:0000358,2.73e-11,10;UBERON:0000307,2.73e-11,10;UBERON:0000091,2.73e-11,10;UBERON:0000087,2.73e-11,10;UBERON:0007010,2.73e-11,10;UBERON:0007806,2.73e-11,10;UBERON:0008780,2.73e-11,10;UBERON:0005728,2.73e-11,10 | |||
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|short_description=p@chr3:78684991..78684993,- | |short_description=p@chr3:78684991..78684993,- | ||
}} | }} |
Latest revision as of 23:40, 29 July 2015
Short description: | p@chr3:78684991..78684993, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:78684991..78684993, - |
Coexpression cluster: | C788_umbilical_aorta_smooth_bladder_penis_colon_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.73e-11 | 10 |
blastocyst | 2.73e-11 | 10 |
blastula | 2.73e-11 | 10 |
bilaminar disc | 2.73e-11 | 10 |
inner cell mass | 2.73e-11 | 10 |
cleaving embryo | 2.73e-11 | 10 |
connecting stalk | 2.73e-11 | 10 |
inner cell mass derived epiblast | 2.73e-11 | 10 |
extraembryonic mesoderm | 2.73e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.14e-26 | 4 |
bronchus cancer | 1.91e-15 | 7 |
bronchogenic carcinoma | 1.91e-15 | 7 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |