FFCP PHASE1:Hg19::chr17:72428429..72428461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:72428429..72428461,+ | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_at_chr17:72428429..72428461,+ | |description=CAGE_peak_at_chr17:72428429..72428461,+ | ||
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|ontology_enrichment_celltype=CL:0000066!4.09e-21!254;CL:0000223!3.17e-14!59;CL:0002076!3.54e-10!43;CL:0000181!8.21e-07!12;CL:0000417!8.21e-07!12;CL:0000668!8.21e-07!12;CL:0000414!8.21e-07!12;CL:0000412!8.21e-07!12;CL:0000182!8.21e-07!12;CL:1000449!9.18e-07!16 | |ontology_enrichment_celltype=CL:0000066!4.09e-21!254;CL:0000223!3.17e-14!59;CL:0002076!3.54e-10!43;CL:0000181!8.21e-07!12;CL:0000417!8.21e-07!12;CL:0000668!8.21e-07!12;CL:0000414!8.21e-07!12;CL:0000412!8.21e-07!12;CL:0000182!8.21e-07!12;CL:1000449!9.18e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.52e-10;12!CL:0002681;3.11e-10;12!CL:0002584;3.11e-10;12!CL:0000244;4.52e-09;4!CL:0000731;4.52e-09;4!CL:1000507;1.25e-08;10!CL:1000494;1.25e-08;10!CL:1000449;4.78e-08;15!CL:1000497;5.10e-07;17!CL:0002518;5.10e-07;17 | |ontology_enrichment_celltype_v019=CL:0000182;2.52e-10;12!CL:0002681;3.11e-10;12!CL:0002584;3.11e-10;12!CL:0000244;4.52e-09;4!CL:0000731;4.52e-09;4!CL:1000507;1.25e-08;10!CL:1000494;1.25e-08;10!CL:1000449;4.78e-08;15!CL:1000497;5.10e-07;17!CL:0002518;5.10e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.02e-12,253;CL:0000223,7.42e-12,58;CL:0000182,1.74e-10,12;CL:0002681,3.83e-10,12;CL:0002584,3.83e-10,12;CL:0000244,5.06e-09,4;CL:0000731,5.06e-09,4;CL:1000507,1.52e-08,10;CL:1000494,1.52e-08,10;CL:1000449,5.61e-08,15;CL:0002322,5.82e-07,5;CL:1000497,5.86e-07,17;CL:0002518,5.86e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.89e-11;3!UBERON:0004161;2.12e-11;11!UBERON:0009497;1.55e-09;13!CL:0000223;1.89e-07;58 | |ontology_enrichment_development_v019=UBERON:0006215;1.89e-11;3!UBERON:0004161;2.12e-11;11!UBERON:0009497;1.55e-09;13!CL:0000223;1.89e-07;58 | ||
|ontology_enrichment_disease=DOID:305!1.01e-11!106;DOID:0050687!5.87e-07!143 | |ontology_enrichment_disease=DOID:305!1.01e-11!106;DOID:0050687!5.87e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.02e-07;2 | |ontology_enrichment_disease_v019=DOID:4468;1.02e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,2.58e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.78e-14!169;UBERON:0000925!2.78e-14!169;UBERON:0006595!2.78e-14!169;UBERON:0005177!1.10e-13!107;UBERON:0005911!1.36e-12!82;UBERON:0000466!1.40e-12!126;UBERON:0005172!3.24e-12!55;UBERON:0005173!3.24e-12!55;UBERON:0009569!4.38e-12!113;UBERON:0002417!1.72e-11!61;UBERON:0000916!1.72e-11!61;UBERON:0006554!9.33e-11!44;UBERON:0004921!1.32e-10!129;UBERON:0004185!1.32e-10!129;UBERON:0001007!1.37e-10!155;UBERON:0001555!1.37e-10!155;UBERON:0007026!1.37e-10!155;UBERON:0001008!2.54e-10!45;UBERON:0000077!1.24e-09!130;UBERON:0003929!2.75e-09!54;UBERON:0001041!6.02e-09!98;UBERON:0000481!3.81e-08!347;UBERON:0009497!5.15e-08!25;UBERON:0000015!5.15e-08!25;UBERON:0002423!5.15e-08!25;UBERON:0006235!5.15e-08!25;UBERON:0004161!5.15e-08!25;UBERON:0000922!5.34e-08!612;UBERON:0000464!6.64e-08!104;UBERON:0006555!1.82e-07!17;UBERON:0005103!1.82e-07!17;UBERON:0000083!1.82e-07!17;UBERON:0009201!1.82e-07!17;UBERON:0004819!1.82e-07!17;UBERON:0006553!1.82e-07!17;UBERON:0003074!1.82e-07!17;UBERON:0003060!1.82e-07!17;UBERON:0000489!1.92e-07!32;UBERON:0007499!2.01e-07!25;UBERON:0003064!2.10e-07!37;UBERON:0002530!2.26e-07!59;UBERON:0009856!5.92e-07!26;UBERON:0002100!5.99e-07!216;UBERON:0004876!6.93e-07!20;UBERON:0003104!7.43e-07!238;UBERON:0009142!7.43e-07!238;UBERON:0002365!7.46e-07!31;UBERON:0002330!7.46e-07!31;UBERON:0000080!7.56e-07!18;UBERON:0002120!7.56e-07!18;UBERON:0004875!7.56e-07!18;UBERON:0005721!7.56e-07!18;UBERON:0005754!7.56e-07!18;UBERON:0007297!7.56e-07!18;UBERON:0002113!7.93e-07!27;UBERON:0003918!7.93e-07!27;UBERON:0005095!7.93e-07!27;UBERON:0007687!7.93e-07!27;UBERON:0000062!8.93e-07!511;UBERON:0008835!9.04e-07!22;UBERON:0003894!9.04e-07!22;UBERON:0004211!9.18e-07!16;UBERON:0001285!9.18e-07!16;UBERON:0007684!9.18e-07!16;UBERON:0003220!9.18e-07!16;UBERON:0004208!9.18e-07!16;UBERON:0001048!9.65e-07!168 | |ontology_enrichment_uberon=UBERON:0004119!2.78e-14!169;UBERON:0000925!2.78e-14!169;UBERON:0006595!2.78e-14!169;UBERON:0005177!1.10e-13!107;UBERON:0005911!1.36e-12!82;UBERON:0000466!1.40e-12!126;UBERON:0005172!3.24e-12!55;UBERON:0005173!3.24e-12!55;UBERON:0009569!4.38e-12!113;UBERON:0002417!1.72e-11!61;UBERON:0000916!1.72e-11!61;UBERON:0006554!9.33e-11!44;UBERON:0004921!1.32e-10!129;UBERON:0004185!1.32e-10!129;UBERON:0001007!1.37e-10!155;UBERON:0001555!1.37e-10!155;UBERON:0007026!1.37e-10!155;UBERON:0001008!2.54e-10!45;UBERON:0000077!1.24e-09!130;UBERON:0003929!2.75e-09!54;UBERON:0001041!6.02e-09!98;UBERON:0000481!3.81e-08!347;UBERON:0009497!5.15e-08!25;UBERON:0000015!5.15e-08!25;UBERON:0002423!5.15e-08!25;UBERON:0006235!5.15e-08!25;UBERON:0004161!5.15e-08!25;UBERON:0000922!5.34e-08!612;UBERON:0000464!6.64e-08!104;UBERON:0006555!1.82e-07!17;UBERON:0005103!1.82e-07!17;UBERON:0000083!1.82e-07!17;UBERON:0009201!1.82e-07!17;UBERON:0004819!1.82e-07!17;UBERON:0006553!1.82e-07!17;UBERON:0003074!1.82e-07!17;UBERON:0003060!1.82e-07!17;UBERON:0000489!1.92e-07!32;UBERON:0007499!2.01e-07!25;UBERON:0003064!2.10e-07!37;UBERON:0002530!2.26e-07!59;UBERON:0009856!5.92e-07!26;UBERON:0002100!5.99e-07!216;UBERON:0004876!6.93e-07!20;UBERON:0003104!7.43e-07!238;UBERON:0009142!7.43e-07!238;UBERON:0002365!7.46e-07!31;UBERON:0002330!7.46e-07!31;UBERON:0000080!7.56e-07!18;UBERON:0002120!7.56e-07!18;UBERON:0004875!7.56e-07!18;UBERON:0005721!7.56e-07!18;UBERON:0005754!7.56e-07!18;UBERON:0007297!7.56e-07!18;UBERON:0002113!7.93e-07!27;UBERON:0003918!7.93e-07!27;UBERON:0005095!7.93e-07!27;UBERON:0007687!7.93e-07!27;UBERON:0000062!8.93e-07!511;UBERON:0008835!9.04e-07!22;UBERON:0003894!9.04e-07!22;UBERON:0004211!9.18e-07!16;UBERON:0001285!9.18e-07!16;UBERON:0007684!9.18e-07!16;UBERON:0003220!9.18e-07!16;UBERON:0004208!9.18e-07!16;UBERON:0001048!9.65e-07!168 | ||
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| ||
|short_description=p@chr17:72428429..72428461,+ | |short_description=p@chr17:72428429..72428461,+ | ||
}} | }} |
Latest revision as of 20:48, 25 July 2015
Short description: | p@chr17:72428429..72428461, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:72428429..72428461, + |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.02e-12 | 253 |
endodermal cell | 7.42e-12 | 58 |
hepatocyte | 1.74e-10 | 12 |
kidney cortical cell | 3.83e-10 | 12 |
renal cortical epithelial cell | 3.83e-10 | 12 |
transitional epithelial cell | 5.06e-09 | 4 |
urothelial cell | 5.06e-09 | 4 |
kidney tubule cell | 1.52e-08 | 10 |
nephron tubule epithelial cell | 1.52e-08 | 10 |
epithelial cell of nephron | 5.61e-08 | 15 |
embryonic stem cell | 5.82e-07 | 5 |
kidney cell | 5.86e-07 | 17 |
kidney epithelial cell | 5.86e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.58e-07 | 2 |