FFCP PHASE1:Hg19::chr13:83676483..83676523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:83676483..83676523,- | |||
|description=CAGE_peak_at_chr13:83676483..83676523,- | |description=CAGE_peak_at_chr13:83676483..83676523,- | ||
|id=chr13:83676483..83676523,- | |id=chr13:83676483..83676523,- | ||
|ontology_enrichment_celltype=CL:0002150!1.36e-08!3;CL:0000861!1.36e-08!3 | |ontology_enrichment_celltype=CL:0002150!1.36e-08!3;CL:0000861!1.36e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.19e-08;1 | |ontology_enrichment_celltype_v019=CL:0000319;2.19e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.19e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.61e-08;1 | |ontology_enrichment_development_v019=UBERON:0005425;9.61e-08;1 | ||
|ontology_enrichment_disease=DOID:162!5.10e-14!235;DOID:14566!1.92e-13!239;DOID:0050687!3.16e-12!143;DOID:305!6.68e-09!106 | |ontology_enrichment_disease=DOID:162!5.10e-14!235;DOID:14566!1.92e-13!239;DOID:0050687!3.16e-12!143;DOID:305!6.68e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.26e-14;8!DOID:3030;2.19e-08;1!DOID:0060085;5.78e-08;1!DOID:3165;5.78e-08;1!DOID:0060121;5.78e-08;1!DOID:2438;5.78e-08;1!DOID:4418;5.78e-08;1!DOID:8692;1.89e-07;31!DOID:2531;6.67e-07;51!DOID:0060083;6.67e-07;51 | |ontology_enrichment_disease_v019=DOID:1036;2.26e-14;8!DOID:3030;2.19e-08;1!DOID:0060085;5.78e-08;1!DOID:3165;5.78e-08;1!DOID:0060121;5.78e-08;1!DOID:2438;5.78e-08;1!DOID:4418;5.78e-08;1!DOID:8692;1.89e-07;31!DOID:2531;6.67e-07;51!DOID:0060083;6.67e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.26e-14,235;DOID:1036,2.18e-14,8;DOID:14566,3.20e-14,239;DOID:0050687,1.56e-11,143;DOID:305,1.10e-09,106;DOID:3030,2.19e-08,1;DOID:0060085,7.10e-08,1;DOID:3165,7.10e-08,1;DOID:0060121,7.10e-08,1;DOID:2438,7.10e-08,1;DOID:4418,7.10e-08,1;DOID:8692,1.28e-07,31;DOID:2531,1.62e-07,51;DOID:0060083,1.62e-07,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.61e-08;1!UBERON:0001785;9.61e-08;1!UBERON:0002464;9.61e-08;1!UBERON:0004904;9.61e-08;1!UBERON:0001021;9.61e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0000941;9.61e-08;1!UBERON:0001785;9.61e-08;1!UBERON:0002464;9.61e-08;1!UBERON:0004904;9.61e-08;1!UBERON:0001021;9.61e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.94e-08,1;UBERON:0001785,9.94e-08,1;UBERON:0002464,9.94e-08,1;UBERON:0004904,9.94e-08,1;UBERON:0001021,9.94e-08,1;UBERON:0003902,9.94e-08,1;UBERON:0005425,9.94e-08,1 | |||
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| ||
|short_description=p@chr13:83676483..83676523,- | |short_description=p@chr13:83676483..83676523,- | ||
}} | }} |
Latest revision as of 17:22, 24 July 2015
Short description: | p@chr13:83676483..83676523, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:83676483..83676523, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.19e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.94e-08 | 1 |
cranial nerve | 9.94e-08 | 1 |
nerve trunk | 9.94e-08 | 1 |
nerve connecting eye with brain | 9.94e-08 | 1 |
nerve | 9.94e-08 | 1 |
retinal neural layer | 9.94e-08 | 1 |
presumptive neural retina | 9.94e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.26e-14 | 235 |
chronic leukemia | 2.18e-14 | 8 |
disease of cellular proliferation | 3.20e-14 | 239 |
cell type cancer | 1.56e-11 | 143 |
carcinoma | 1.10e-09 | 106 |
mucinous adenocarcinoma | 2.19e-08 | 1 |
organ system benign neoplasm | 7.10e-08 | 1 |
skin benign neoplasm | 7.10e-08 | 1 |
integumentary system benign neoplasm | 7.10e-08 | 1 |
dermis tumor | 7.10e-08 | 1 |
cutaneous fibrous histiocytoma | 7.10e-08 | 1 |
myeloid leukemia | 1.28e-07 | 31 |
hematologic cancer | 1.62e-07 | 51 |
immune system cancer | 1.62e-07 | 51 |