FFCP PHASE1:Hg19::chr1:168545833..168545848,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6375 | |EntrezGene=6375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10645 | |HGNC=10645 | ||
|TSSclassifier=strong | |||
|UniProt=P47992 | |UniProt=P47992 | ||
|association_with_transcript=-7bp_to_uc001gfo.1_5end | |association_with_transcript=-7bp_to_uc001gfo.1_5end | ||
|cluster_id=chr1:168545833..168545848,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_1_at_XCL1_5end | |description=CAGE_peak_1_at_XCL1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!4.29e-25!140;CL:0000988!2.51e-21!182;CL:0000037!3.01e-21!172;CL:0000566!3.01e-21!172;CL:0002032!1.13e-18!165;CL:0000837!1.13e-18!165;CL:0002031!2.55e-16!124;CL:0002087!3.20e-15!119;CL:0000838!2.67e-13!52;CL:0000542!7.58e-13!53;CL:0000051!7.58e-13!53;CL:0000625!1.92e-11!11;CL:0000791!4.76e-11!18;CL:0000789!4.76e-11!18;CL:0002420!4.76e-11!18;CL:0002419!4.76e-11!18;CL:0000790!4.76e-11!18;CL:0000084!2.40e-10!25;CL:0000827!2.40e-10!25;CL:0000766!5.53e-08!76;CL:0000080!8.62e-08!6;CL:0000763!9.88e-08!112;CL:0000049!9.88e-08!112;CL:0000451!3.32e-07!10 | |ontology_enrichment_celltype=CL:0000738!4.29e-25!140;CL:0000988!2.51e-21!182;CL:0000037!3.01e-21!172;CL:0000566!3.01e-21!172;CL:0002032!1.13e-18!165;CL:0000837!1.13e-18!165;CL:0002031!2.55e-16!124;CL:0002087!3.20e-15!119;CL:0000838!2.67e-13!52;CL:0000542!7.58e-13!53;CL:0000051!7.58e-13!53;CL:0000625!1.92e-11!11;CL:0000791!4.76e-11!18;CL:0000789!4.76e-11!18;CL:0002420!4.76e-11!18;CL:0002419!4.76e-11!18;CL:0000790!4.76e-11!18;CL:0000084!2.40e-10!25;CL:0000827!2.40e-10!25;CL:0000766!5.53e-08!76;CL:0000080!8.62e-08!6;CL:0000763!9.88e-08!112;CL:0000049!9.88e-08!112;CL:0000451!3.32e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.15e-16;11!CL:0000791;5.32e-15;18!CL:0000789;5.32e-15;18!CL:0002419;5.32e-15;18!CL:0000084;1.31e-13;25!CL:0000094;7.67e-08;8!CL:0000081;2.17e-07;11!CL:0000451;3.08e-07;10!CL:0000542;4.78e-07;53!CL:0000623;6.09e-07;3!CL:0000767;9.43e-07;3 | |ontology_enrichment_celltype_v019=CL:0000625;1.15e-16;11!CL:0000791;5.32e-15;18!CL:0000789;5.32e-15;18!CL:0002419;5.32e-15;18!CL:0000084;1.31e-13;25!CL:0000094;7.67e-08;8!CL:0000081;2.17e-07;11!CL:0000451;3.08e-07;10!CL:0000542;4.78e-07;53!CL:0000623;6.09e-07;3!CL:0000767;9.43e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.26e-23,136;CL:0000988,1.37e-18,177;CL:0000037,2.04e-17,168;CL:0000625,1.06e-16,11;CL:0000791,5.54e-15,18;CL:0000789,5.54e-15,18;CL:0002420,5.54e-15,18;CL:0002419,5.54e-15,18;CL:0000790,5.54e-15,18;CL:0000838,1.96e-14,52;CL:0002032,3.18e-14,161;CL:0000837,3.18e-14,161;CL:0000542,5.06e-14,53;CL:0000051,5.06e-14,53;CL:0000084,1.36e-13,25;CL:0000827,1.36e-13,25;CL:0002031,2.68e-12,120;CL:0002087,2.34e-11,115;CL:0000094,7.84e-08,8;CL:0000081,2.20e-07,11;CL:0000451,3.04e-07,10;CL:0000623,6.11e-07,3;CL:0000825,6.11e-07,3;CL:0000767,9.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.32e-15;18!CL:0000051;4.78e-07;53 | |ontology_enrichment_development_v019=CL:0000790;5.32e-15;18!CL:0000051;4.78e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.47e-19!115;UBERON:0000178!3.30e-15!15;UBERON:0000179!3.30e-15!15;UBERON:0000463!3.30e-15!15;UBERON:0002390!6.68e-14!102;UBERON:0003061!6.68e-14!102;UBERON:0002193!8.10e-13!112 | |ontology_enrichment_uberon=UBERON:0007023!4.47e-19!115;UBERON:0000178!3.30e-15!15;UBERON:0000179!3.30e-15!15;UBERON:0000463!3.30e-15!15;UBERON:0002390!6.68e-14!102;UBERON:0003061!6.68e-14!102;UBERON:0002193!8.10e-13!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.39e-22;15!UBERON:0000179;1.39e-22;15!UBERON:0000463;1.39e-22;15!UBERON:0002390;8.38e-14;32!UBERON:0002193;2.54e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.39e-22;15!UBERON:0000179;1.39e-22;15!UBERON:0000463;1.39e-22;15!UBERON:0002390;8.38e-14;32!UBERON:0002193;2.54e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.76e-22,15;UBERON:0000179,1.76e-22,15;UBERON:0000463,1.76e-22,15;UBERON:0002390,4.20e-12,98;UBERON:0003061,4.20e-12,98;UBERON:0002193,8.51e-12,108;UBERON:0007023,3.72e-07,114;UBERON:0004177,9.67e-07,7;UBERON:0005057,9.67e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,872.41185342436,842.926751882593,797.655057832825,28.3222279331211,19.1914699048606,33.7499148829046,0,0,0,0,0,0,0.553995408531877,3.60980005446255,3.90619567288533,0.223915474239924,4.21061765824673,0.257575567634187,0,0,0.242584061187816,0.697287110717054,0,1.54853185447552,1.1507695692886,0,0,1.37898272294647,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,2.56743221660875,0,0,0,0,0.870627715885752,6.24123747160254,0.622822248995575,1.25624332628372,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,13.4522055115569,0.263384084775077,0,1.17903228824749,0,0,1.30368906653436,0,0,6.68462741311041,0,0,0.270803863765016,4.48319619039863,19.5089021339817,61.1709005125675,127.12100818149,46.0786906318733,0.14828656316206,0,0,3.39928028092699,0.383220493601921,1.03088233644789,2.02415753615602,2.86708872891687,5.85975108470777,4.75226022224187,1.20460095262218,1.66382594500744,6.24653632761729,3.31488152861624,4.10563998460523,7.05623601286563,46.2671538705468,6.66192257860875,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.851363990735132,0,0,0,0.522389211897802,0.398873881556595,11.6860405909618,21.7358066096449,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91413608338813,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,9.36060152002293,0.088048434013226,41.2582949926136,7.92659743793288,17.8001831131196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0720070707831,46.105197887251,57.7881900623506,50.3104702216614,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89102512328416,8.19713963110744,5.12292277456533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.82431402330337,0,0,0,0,2.53723804616085,2.29391162142713,5.69647187174163,2.1440859791201,1.23408681925858,3.8908398671563,3.24018862342869,2.37937552888281,0,0,0,0,0,0,0,2.59453182862662,0.5745161103971,0.635020748171649,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,2.99764771198038,0,0,0.439524537815682,0,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0.211125408127993,2.59022384726391,7.18338180380984,0,0,0.615424027305347,0,0,0,0,1.87422470710174,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0,3.82801391678303,0.457987967009312,12.7928346244472,0,0.31396051279005,0,0,0.19606253431774,0,0,0,0,0,0,0,2.98578579323551,0.265372693510018,6.72133159426988,14.2330141766699,16.4340038798849,15.3500265773019,0.134802265961354,0.802577647298789,0,0,0,0,0,3.62972148145992,0,0.505492637027904,1.20258735531594,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0.387025325156341,0,0,0.872901148395775,0,0.677942222341597,0,0,0.189932387867636,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.9588778504558,1.11712960508902,0.458320848023367,0,0,0,0,0.739018197353989,0,0,0.0787831823072236,0,0,0,0.846733320657845,0,0,0.160753148465019,0,0,10.5737729029205,0,0,0,1.10327990218877,0.157363764404994,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0.129282956361551,0.13223260174269,0,0,3.52398461473392,2.51526888159466,3.31391244277756,6.45015828355536,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3575386049236,8.37048493974187,2.12635012532597,0,0,0,251.784131381357,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.601682626794058,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,2.04015451374069,110.163692103325,0,0,0.0657727735628491,0,0,0.863424021355654,0.157115589916002,0,1.82631744101899,0,0,1.1436247068265,0,0,0,0,0,0,0,1.29068207646083,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,2.4285549652957,0,0,0,0,0,0,1.389134845943,13.3321331907414,0,0.735444965261716,0,0.196308467114945,0,0.8453114551668,0,6.4848903406099,13.6650722503984,0,0,0,0,1.46067277649303,3.21110498383179,0.573358332605805,0,0.135982980381829,0,4.7612415646386,0,0,0,0,0.327796715891087,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,1.91910583710883,0.714193294391221,15.8242829098215,14.2151095737515,0,0.381882949668989,0.202117188958219,1.08858373948481,0.342233301085281,3.502306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| ||
|short_description=p1@XCL1 | |short_description=p1@XCL1 | ||
}} | }} |
Latest revision as of 12:28, 18 September 2015
Short description: | p1@XCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XCL1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -7bp_to_uc001gfo.1_5end |
EntrezGene: | XCL1 |
HGNC: | 10645 |
UniProt: | P47992 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.26e-23 | 136 |
hematopoietic cell | 1.37e-18 | 177 |
hematopoietic stem cell | 2.04e-17 | 168 |
CD8-positive, alpha-beta T cell | 1.06e-16 | 11 |
mature alpha-beta T cell | 5.54e-15 | 18 |
alpha-beta T cell | 5.54e-15 | 18 |
immature T cell | 5.54e-15 | 18 |
mature T cell | 5.54e-15 | 18 |
immature alpha-beta T cell | 5.54e-15 | 18 |
lymphoid lineage restricted progenitor cell | 1.96e-14 | 52 |
hematopoietic oligopotent progenitor cell | 3.18e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.18e-14 | 161 |
lymphocyte | 5.06e-14 | 53 |
common lymphoid progenitor | 5.06e-14 | 53 |
T cell | 1.36e-13 | 25 |
pro-T cell | 1.36e-13 | 25 |
hematopoietic lineage restricted progenitor cell | 2.68e-12 | 120 |
nongranular leukocyte | 2.34e-11 | 115 |
granulocyte | 7.84e-08 | 8 |
blood cell | 2.20e-07 | 11 |
dendritic cell | 3.04e-07 | 10 |
natural killer cell | 6.11e-07 | 3 |
pro-NK cell | 6.11e-07 | 3 |
basophil | 9.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.76e-22 | 15 |
haemolymphatic fluid | 1.76e-22 | 15 |
organism substance | 1.76e-22 | 15 |
hematopoietic system | 4.20e-12 | 98 |
blood island | 4.20e-12 | 98 |
hemolymphoid system | 8.51e-12 | 108 |
adult organism | 3.72e-07 | 114 |
hemopoietic organ | 9.67e-07 | 7 |
immune organ | 9.67e-07 | 7 |