FFCP PHASE1:Hg19::chr21:16254322..16254327,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:16254322..16254327,-
|short_description=p1@ENST00000418954
|description=CAGE_peak_1_at_ENST00000418954_5end
|association_with_transcript=-26bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000418954_5end | |||
|cluster_id=chr21:16254322..16254327,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_ENST00000418954_5end | |||
|id=chr21:16254322..16254327,- | |||
|ontology_enrichment_celltype=CL:0000359!3.41e-18!32;CL:0000222!3.36e-13!119;CL:0000187!5.25e-13!54;CL:0000183!1.56e-12!59;CL:0000192!1.78e-12!42;CL:0000514!1.78e-12!42;CL:0000680!5.72e-12!57;CL:0000056!5.72e-12!57;CL:0000355!5.72e-12!57;CL:0000393!4.85e-11!60;CL:0000211!4.85e-11!60;CL:0002595!2.34e-10!5;CL:0002541!1.91e-07!3;CL:0002592!9.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002595;7.52e-23;5!CL:0000359;1.86e-16;32!CL:0002541;1.06e-15;3!CL:0002592;7.07e-14;3!CL:0002593;3.68e-10;2!CL:0002596;5.20e-10;2!CL:0000192;6.34e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.04e-22,5;CL:0000359,7.04e-18,32;CL:0002541,1.03e-15,3;CL:0002592,5.04e-14,3;CL:0000192,1.13e-12,43;CL:0000514,1.13e-12,43;CL:0000187,4.35e-11,55;CL:0000680,2.24e-10,58;CL:0000056,2.24e-10,58;CL:0000355,2.24e-10,58;CL:0002596,4.43e-10,2;CL:0002593,4.43e-10,2;CL:0000393,9.78e-10,61;CL:0000211,9.78e-10,61;CL:0000222,2.89e-09,121 | |||
|ontology_enrichment_development_v019=CL:0000514;6.34e-10;43!CL:0000355;8.28e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.97e-15!42;UBERON:0003509!1.97e-15!42;UBERON:0004572!1.97e-15!42;UBERON:0004573!3.70e-14!33;UBERON:0004571!3.70e-14!33;UBERON:0000055!6.05e-14!69;UBERON:0002049!4.48e-13!79;UBERON:0007798!4.48e-13!79;UBERON:0001981!3.77e-12!60;UBERON:0007500!3.77e-12!60;UBERON:0004537!3.77e-12!60;UBERON:0006965!3.77e-12!60;UBERON:0001134!9.40e-11!61;UBERON:0002036!9.40e-11!61;UBERON:0003082!9.40e-11!61;UBERON:0003834!2.34e-10!5;UBERON:0001533!2.34e-10!5;UBERON:0002385!3.31e-10!63;UBERON:0001015!3.31e-10!63;UBERON:0000383!3.31e-10!63;UBERON:0000486!7.69e-09!82;UBERON:0004290!1.47e-08!70;UBERON:0004872!1.52e-08!84;UBERON:0003914!2.12e-08!118;UBERON:0004535!7.02e-08!110;UBERON:0001009!1.82e-07!113;UBERON:0000476!1.91e-07!3;UBERON:0000920!1.91e-07!3;UBERON:0000490!6.06e-07!138;UBERON:0001621!9.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;7.52e-23;5!UBERON:0001533;7.52e-23;5!UBERON:0003513;2.89e-16;7!UBERON:0003124;1.06e-15;3!UBERON:0000920;1.06e-15;3!UBERON:0004573;3.61e-14;33!UBERON:0004571;3.61e-14;33!UBERON:0003498;7.07e-14;3!UBERON:0005985;7.07e-14;3!UBERON:0001621;7.07e-14;3!UBERON:0005631;5.48e-12;10!UBERON:0000158;5.48e-12;10!UBERON:0002456;3.68e-10;2!UBERON:0005396;5.20e-10;2!UBERON:0001637;5.41e-10;42!UBERON:0003509;5.41e-10;42!UBERON:0004572;5.41e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.04e-22,5;UBERON:0001533,1.04e-22,5;UBERON:0004573,2.92e-17,33;UBERON:0004571,2.92e-17,33;UBERON:0003513,3.62e-16,7;UBERON:0000920,1.03e-15,3;UBERON:0001621,5.04e-14,3;UBERON:0001637,4.91e-13,42;UBERON:0003509,4.91e-13,42;UBERON:0004572,4.91e-13,42;UBERON:0005631,5.08e-12,14;UBERON:0000158,5.08e-12,14;UBERON:0003124,1.18e-11,7;UBERON:0007500,3.32e-10,59;UBERON:0001981,3.32e-10,59;UBERON:0004537,3.32e-10,59;UBERON:0006965,3.32e-10,59;UBERON:0002456,4.43e-10,2;UBERON:0005396,4.43e-10,2;UBERON:0001134,1.55e-09,62;UBERON:0002036,1.55e-09,62;UBERON:0003082,1.55e-09,62;UBERON:0002385,3.71e-09,64;UBERON:0001015,3.71e-09,64;UBERON:0000383,3.71e-09,64;UBERON:0004872,5.40e-09,83;UBERON:0000486,6.95e-09,83;UBERON:0003498,1.31e-08,5;UBERON:0005985,1.31e-08,5;UBERON:0000055,1.66e-08,68;UBERON:0002329,5.35e-08,71;UBERON:0003059,5.35e-08,71;UBERON:0007282,5.35e-08,71;UBERON:0004290,5.35e-08,71;UBERON:0009618,5.35e-08,71;UBERON:0003077,7.49e-08,72;UBERON:0007285,7.49e-08,72;UBERON:0007524,1.04e-07,73;UBERON:0003914,2.46e-07,117;UBERON:0002049,4.35e-07,78;UBERON:0007798,4.35e-07,78;UBERON:0007503,4.72e-07,78;UBERON:0000478,9.93e-07,24 | |||
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| ||
|short_description=p1@ENST00000418954 | |||
}} | }} |
Latest revision as of 16:45, 28 July 2015
Short description: | p1@ENST00000418954 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000418954_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -26bp_to_ENST00000418954_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.04e-22 | 5 |
vascular associated smooth muscle cell | 7.04e-18 | 32 |
chorionic membrane mesenchymal stem cell | 1.03e-15 | 3 |
smooth muscle cell of the coronary artery | 5.04e-14 | 3 |
smooth muscle cell | 1.13e-12 | 43 |
smooth muscle myoblast | 1.13e-12 | 43 |
muscle cell | 4.35e-11 | 55 |
muscle precursor cell | 2.24e-10 | 58 |
myoblast | 2.24e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.24e-10 | 58 |
smooth muscle cell of the carotid artery | 4.43e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 4.43e-10 | 2 |
electrically responsive cell | 9.78e-10 | 61 |
electrically active cell | 9.78e-10 | 61 |
mesodermal cell | 2.89e-09 | 121 |