FFCP PHASE1:Hg19::chr8:8559690..8559736,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137075 | |EntrezGene=137075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17591 | |HGNC=17591 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B33 | |UniProt=Q96B33 | ||
|association_with_transcript=24bp_to_ENST00000389800,NM_194284,uc003wsi.2_5end | |association_with_transcript=24bp_to_ENST00000389800,NM_194284,uc003wsi.2_5end | ||
|cluster_id=chr8:8559690..8559736,+ | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_2_at_CLDN23_5end | |description=CAGE_peak_2_at_CLDN23_5end | ||
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|ontology_enrichment_celltype=CL:0000839!2.60e-23!70;CL:0000557!9.16e-23!71;CL:0002194!4.15e-22!63;CL:0000576!4.15e-22!63;CL:0000040!4.15e-22!63;CL:0000559!4.15e-22!63;CL:0000766!3.22e-21!76;CL:0002009!5.43e-21!65;CL:0002057!2.94e-18!42;CL:0000860!2.39e-16!45;CL:0000763!8.31e-10!112;CL:0000049!8.31e-10!112;CL:0002031!1.21e-07!124;CL:0002087!3.47e-07!119 | |ontology_enrichment_celltype=CL:0000839!2.60e-23!70;CL:0000557!9.16e-23!71;CL:0002194!4.15e-22!63;CL:0000576!4.15e-22!63;CL:0000040!4.15e-22!63;CL:0000559!4.15e-22!63;CL:0000766!3.22e-21!76;CL:0002009!5.43e-21!65;CL:0002057!2.94e-18!42;CL:0000860!2.39e-16!45;CL:0000763!8.31e-10!112;CL:0000049!8.31e-10!112;CL:0002031!1.21e-07!124;CL:0002087!3.47e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.26e-16;6!CL:0002619;1.32e-11;3!CL:0000473;3.11e-10;39!CL:0000234;3.11e-10;39!CL:0000039;1.52e-08;7!CL:0000586;1.52e-08;7 | |ontology_enrichment_celltype_v019=CL:0000235;6.26e-16;6!CL:0002619;1.32e-11;3!CL:0000473;3.11e-10;39!CL:0000234;3.11e-10;39!CL:0000039;1.52e-08;7!CL:0000586;1.52e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.20e-19,59;CL:0000576,1.20e-19,59;CL:0000040,1.20e-19,59;CL:0000559,1.20e-19,59;CL:0002009,7.48e-19,61;CL:0000839,4.46e-17,66;CL:0000557,9.38e-17,67;CL:0000235,7.26e-16,6;CL:0000766,2.85e-15,72;CL:0002619,9.92e-12,3;CL:0000473,1.04e-11,48;CL:0000234,1.04e-11,48;CL:0000763,1.11e-08,108;CL:0000049,1.11e-08,108;CL:0000039,1.65e-08,7;CL:0000586,1.65e-08,7;CL:0002087,6.90e-08,115;CL:0002031,2.22e-07,120 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;4.35e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;4.35e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,5.63e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.21e-20!80;UBERON:0001474!4.09e-18!86;UBERON:0002390!2.31e-16!102;UBERON:0003061!2.31e-16!102;UBERON:0002405!5.00e-16!115;UBERON:0002193!4.59e-15!112;UBERON:0004765!9.37e-15!101;UBERON:0001434!9.37e-15!101;UBERON:0000062!2.93e-09!511;UBERON:0002204!7.98e-09!167;UBERON:0000059!5.20e-08!11;UBERON:0004921!5.37e-08!129;UBERON:0004185!5.37e-08!129;UBERON:0000926!3.39e-07!448;UBERON:0004120!3.39e-07!448;UBERON:0006603!3.39e-07!448;UBERON:0000160!3.70e-07!27;UBERON:0005409!3.72e-07!35;UBERON:0001007!5.58e-07!155;UBERON:0001555!5.58e-07!155;UBERON:0007026!5.58e-07!155;UBERON:0001046!6.68e-07!19;UBERON:0000468!9.95e-07!659 | |ontology_enrichment_uberon=UBERON:0002371!1.21e-20!80;UBERON:0001474!4.09e-18!86;UBERON:0002390!2.31e-16!102;UBERON:0003061!2.31e-16!102;UBERON:0002405!5.00e-16!115;UBERON:0002193!4.59e-15!112;UBERON:0004765!9.37e-15!101;UBERON:0001434!9.37e-15!101;UBERON:0000062!2.93e-09!511;UBERON:0002204!7.98e-09!167;UBERON:0000059!5.20e-08!11;UBERON:0004921!5.37e-08!129;UBERON:0004185!5.37e-08!129;UBERON:0000926!3.39e-07!448;UBERON:0004120!3.39e-07!448;UBERON:0006603!3.39e-07!448;UBERON:0000160!3.70e-07!27;UBERON:0005409!3.72e-07!35;UBERON:0001007!5.58e-07!155;UBERON:0001555!5.58e-07!155;UBERON:0007026!5.58e-07!155;UBERON:0001046!6.68e-07!19;UBERON:0000468!9.95e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.34e-12;22!UBERON:0000160;4.32e-10;17!UBERON:0000059;4.83e-09;11!UBERON:0000341;4.35e-08;2!UBERON:0004921;1.97e-07;33!UBERON:0001155;2.35e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0005409;2.34e-12;22!UBERON:0000160;4.32e-10;17!UBERON:0000059;4.83e-09;11!UBERON:0000341;4.35e-08;2!UBERON:0004921;1.97e-07;33!UBERON:0001155;2.35e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.16e-14,76;UBERON:0001474,7.50e-13,82;UBERON:0004765,2.63e-11,90;UBERON:0002405,8.52e-11,93;UBERON:0005409,1.01e-10,25;UBERON:0000160,4.46e-10,17;UBERON:0002390,5.13e-10,98;UBERON:0003061,5.13e-10,98;UBERON:0001434,9.98e-10,100;UBERON:0000059,5.06e-09,11;UBERON:0002193,1.11e-08,108;UBERON:0000341,4.37e-08,2;UBERON:0001155,2.44e-07,9 | |||
|phase1_expression=0,0.642301571672949,0,2.00146596706261,0,0,0,0,1.04474251279935,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,1.66198622559563,0.601633342410425,0.651032612147555,2.46307021663917,1.6194683300949,1.28787783817093,0.581592955118259,0,0,0.464858073811369,1.23350366406548,0.309706370895104,0.863077176966451,0.512321413058201,0.47296445977717,1.03423704220986,0,0,0.564727018627814,0.272906150057846,0,0.918251677112708,1.28371610830437,0,1.64925650093358,1.59570926097305,0,0.580418477257168,0.56738522469114,0.622822248995575,1.25624332628372,2.08593167368081,0.65156653411535,1.21079900526674,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.786300418025466,0.450530678524519,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,2.59637914923747,2.26368658489047,8.11043559165077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.368965315629341,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0,0.790204397959275,0.858486162094873,4.43190610957315,1.40402559083543,5.20209068010549,0,0,0,0,0,0,0,0.528290604079356,0.414656231081544,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.164254312027618,0,0,0.362578348774867,0,0,0,0,0.786746489756545,0.451199612907412,0,0.784349769176855,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,4.42054264849836,0,0,0,0,0.179736702294654,0,0,0.394573622547734,0,0,0,0,1.99613798001194,1.5625665665114,0.0874599999961957,0,0,1.77977555204936,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,1.1528195219403,0.179515288819544,0.108647371922008,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,5.97157158647103,3.00755719311353,23.8301756524114,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0,1.95984794828755,0,1.04836000945218,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0,0,1.95551382734803,0,3.84215390530835,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.275078873194468,0,0,0,0,0,0.236417121897595,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0.704815022316672,0.427149650270779,0.314408610199332,2.07119527673598,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,1.24183318227694,0,0.171488009437418,0,0,0.236387681767936,0,0.627944742804112,0,0.840816489941367,9.13158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0,1.27595303699816,1.21917924982269,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,6.09675849052763,0.874238242015829,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,2.92134555298607,0.458729283404541,0,0,0,0,3.7031878836078,0,3.23522940041993,0,0,0,0,3.77358670045332,1.06886962106224,1.8378979906969,0,0,0,0,0,1.0661699095049,1.66645102024618,0.0645889098360061,0.0620747142958579,0,0.572824424503484,0.606351566874658,0,0.684466602170562,0.471464371102113,0.645499848534087,1.66330178273007,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 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| ||
|short_description=p2@CLDN23 | |short_description=p2@CLDN23 | ||
}} | }} |
Latest revision as of 07:28, 19 September 2015
Short description: | p2@CLDN23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLDN23_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 24bp_to_ENST00000389800, NM_194284, uc003wsi.2_5end |
EntrezGene: | CLDN23 |
HGNC: | 17591 |
UniProt: | Q96B33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.20e-19 | 59 |
monocyte | 1.20e-19 | 59 |
monoblast | 1.20e-19 | 59 |
promonocyte | 1.20e-19 | 59 |
macrophage dendritic cell progenitor | 7.48e-19 | 61 |
myeloid lineage restricted progenitor cell | 4.46e-17 | 66 |
granulocyte monocyte progenitor cell | 9.38e-17 | 67 |
macrophage | 7.26e-16 | 6 |
myeloid leukocyte | 2.85e-15 | 72 |
adult endothelial progenitor cell | 9.92e-12 | 3 |
defensive cell | 1.04e-11 | 48 |
phagocyte | 1.04e-11 | 48 |
myeloid cell | 1.11e-08 | 108 |
common myeloid progenitor | 1.11e-08 | 108 |
germ line cell | 1.65e-08 | 7 |
germ cell | 1.65e-08 | 7 |
nongranular leukocyte | 6.90e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.22e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.16e-14 | 76 |
bone element | 7.50e-13 | 82 |
skeletal element | 2.63e-11 | 90 |
immune system | 8.52e-11 | 93 |
gastrointestinal system | 1.01e-10 | 25 |
intestine | 4.46e-10 | 17 |
hematopoietic system | 5.13e-10 | 98 |
blood island | 5.13e-10 | 98 |
skeletal system | 9.98e-10 | 100 |
large intestine | 5.06e-09 | 11 |
hemolymphoid system | 1.11e-08 | 108 |
throat | 4.37e-08 | 2 |
colon | 2.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.63e-08 | 2 |