FFCP PHASE1:Hg19::chr14:81426019..81426027,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145508 | |EntrezGene=145508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20359 | |HGNC=20359 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-158bp_to_ENST00000554368_5end | |association_with_transcript=-158bp_to_ENST00000554368_5end | ||
|cluster_id=chr14:81426019..81426027,- | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_7_at_CEP128_5end | |description=CAGE_peak_7_at_CEP128_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000542!2.02e-20!53;CL:0000051!2.02e-20!53;CL:0000838!4.24e-18!52;CL:0000624!2.60e-15!6;CL:0000785!4.15e-12!2;CL:0000955!4.15e-12!2;CL:0000818!4.15e-12!2;CL:0000954!4.15e-12!2;CL:0000816!4.15e-12!2;CL:0002087!4.76e-11!119;CL:0000738!4.08e-10!140;CL:0000817!2.33e-08!3;CL:0000623!2.42e-08!3;CL:0000825!2.42e-08!3;CL:0000842!3.37e-08!3;CL:0000945!8.03e-08!24;CL:0000826!8.03e-08!24;CL:0000084!1.35e-07!25;CL:0000827!1.35e-07!25;CL:0000037!1.60e-07!172;CL:0000566!1.60e-07!172;CL:0000819!6.02e-07!1;CL:0000988!6.68e-07!182;CL:0002031!6.88e-07!124;CL:0000946!8.02e-07!1;CL:0000786!8.02e-07!1;CL:0000980!8.02e-07!1 | |ontology_enrichment_celltype=CL:0000542!2.02e-20!53;CL:0000051!2.02e-20!53;CL:0000838!4.24e-18!52;CL:0000624!2.60e-15!6;CL:0000785!4.15e-12!2;CL:0000955!4.15e-12!2;CL:0000818!4.15e-12!2;CL:0000954!4.15e-12!2;CL:0000816!4.15e-12!2;CL:0002087!4.76e-11!119;CL:0000738!4.08e-10!140;CL:0000817!2.33e-08!3;CL:0000623!2.42e-08!3;CL:0000825!2.42e-08!3;CL:0000842!3.37e-08!3;CL:0000945!8.03e-08!24;CL:0000826!8.03e-08!24;CL:0000084!1.35e-07!25;CL:0000827!1.35e-07!25;CL:0000037!1.60e-07!172;CL:0000566!1.60e-07!172;CL:0000819!6.02e-07!1;CL:0000988!6.68e-07!182;CL:0002031!6.88e-07!124;CL:0000946!8.02e-07!1;CL:0000786!8.02e-07!1;CL:0000980!8.02e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000815;2.90e-12;2!CL:0000792;2.90e-12;2!CL:0002677;2.90e-12;2!CL:0000898;1.30e-08;3 | |ontology_enrichment_celltype_v019=CL:0000815;2.90e-12;2!CL:0000792;2.90e-12;2!CL:0002677;2.90e-12;2!CL:0000898;1.30e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,3.24e-12,2;CL:0000792,3.24e-12,2;CL:0002677,3.24e-12,2;CL:0000898,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.90e-12;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.90e-12;2 | ||
|ontology_enrichment_disease=DOID:0060058!2.18e-09!10;DOID:0060073!6.02e-07!1;DOID:8675!6.02e-07!1 | |ontology_enrichment_disease=DOID:0060058!2.18e-09!10;DOID:0060073!6.02e-07!1;DOID:8675!6.02e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.45e-10;10 | |ontology_enrichment_disease_v019=DOID:0060058;8.45e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.09e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.83e-08!7;UBERON:0001736!4.51e-07!1;UBERON:0006298!4.51e-07!1;UBERON:0002370!5.86e-07!4;UBERON:0005058!5.86e-07!4;UBERON:0009113!5.86e-07!4;UBERON:0003295!5.86e-07!4;UBERON:0005562!5.86e-07!4;UBERON:0002372!7.15e-07!1;UBERON:0001961!7.15e-07!1;UBERON:0001744!7.15e-07!1;UBERON:0001735!7.15e-07!1 | |ontology_enrichment_uberon=UBERON:0004177!5.83e-08!7;UBERON:0001736!4.51e-07!1;UBERON:0006298!4.51e-07!1;UBERON:0002370!5.86e-07!4;UBERON:0005058!5.86e-07!4;UBERON:0009113!5.86e-07!4;UBERON:0003295!5.86e-07!4;UBERON:0005562!5.86e-07!4;UBERON:0002372!7.15e-07!1;UBERON:0001961!7.15e-07!1;UBERON:0001744!7.15e-07!1;UBERON:0001735!7.15e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-45;2!UBERON:0005058;2.03e-45;2!UBERON:0009113;2.03e-45;2!UBERON:0004177;7.24e-19;5!UBERON:0005057;7.24e-19;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-45;2!UBERON:0005058;2.03e-45;2!UBERON:0009113;2.03e-45;2!UBERON:0004177;7.24e-19;5!UBERON:0005057;7.24e-19;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.63e-23,4;UBERON:0005058,2.63e-23,4;UBERON:0009113,2.63e-23,4;UBERON:0003295,2.63e-23,4;UBERON:0005562,2.63e-23,4;UBERON:0003351,6.71e-16,6;UBERON:0004177,8.94e-14,7;UBERON:0005057,8.94e-14,7;UBERON:0000974,6.20e-10,10;UBERON:0003408,6.20e-10,10;UBERON:0001042,6.20e-10,10;UBERON:0009145,6.20e-10,10;UBERON:0006562,4.08e-09,11;UBERON:0009722,4.08e-09,11;UBERON:0007690,4.08e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70427841276664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.334231370655521,1.47302953737419,1.99380505125259,2.97884250141517,0,0.390178042679635,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.782560276832555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55690245081271,13.4081382879053,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70427841276664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.334231370655521,1.47302953737419,1.99380505125259,2.97884250141517,0,0.390178042679635,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.782560276832555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55690245081271,13.4081382879053,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p7@CEP128 | |short_description=p7@CEP128 | ||
}} | }} |
Latest revision as of 08:03, 16 September 2015
Short description: | p7@CEP128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CEP128_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -158bp_to_ENST00000554368_5end |
EntrezGene: | CEP128 |
HGNC: | 20359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 3.24e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.24e-12 | 2 |
naive regulatory T cell | 3.24e-12 | 2 |
naive T cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.63e-23 | 4 |
hemolymphoid system gland | 2.63e-23 | 4 |
thymic region | 2.63e-23 | 4 |
pharyngeal gland | 2.63e-23 | 4 |
thymus primordium | 2.63e-23 | 4 |
pharyngeal epithelium | 6.71e-16 | 6 |
hemopoietic organ | 8.94e-14 | 7 |
immune organ | 8.94e-14 | 7 |
neck | 6.20e-10 | 10 |
gland of gut | 6.20e-10 | 10 |
chordate pharynx | 6.20e-10 | 10 |
pharyngeal region of foregut | 6.20e-10 | 10 |
pharynx | 4.08e-09 | 11 |
entire pharyngeal arch endoderm | 4.08e-09 | 11 |
early pharyngeal endoderm | 4.08e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.09e-10 | 10 |