FFCP PHASE1:Hg19::chr1:170632683..170632696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-350bp_to_ENST00000239461_5end | |association_with_transcript=-350bp_to_ENST00000239461_5end | ||
|cluster_id=chr1:170632683..170632696,+ | |||
|coexpression_cluster_id=C929 | |coexpression_cluster_id=C929 | ||
|description=CAGE_peak_12_at_PRRX1_5end | |description=CAGE_peak_12_at_PRRX1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.64e-33!180;CL:0000057!1.08e-21!75;CL:0000680!2.67e-13!57;CL:0000056!2.67e-13!57;CL:0000355!2.67e-13!57;CL:0000187!4.85e-12!54;CL:0002620!6.86e-12!23;CL:0000183!4.09e-11!59;CL:0000393!5.40e-10!60;CL:0000211!5.40e-10!60;CL:0002334!6.13e-10!12;CL:0000192!3.43e-09!42;CL:0000514!3.43e-09!42;CL:0000359!3.90e-09!32;CL:0000048!1.76e-08!430;CL:0000723!9.83e-08!436;CL:0000034!5.50e-07!444;CL:0000136!7.91e-07!15 | |ontology_enrichment_celltype=CL:0000055!3.64e-33!180;CL:0000057!1.08e-21!75;CL:0000680!2.67e-13!57;CL:0000056!2.67e-13!57;CL:0000355!2.67e-13!57;CL:0000187!4.85e-12!54;CL:0002620!6.86e-12!23;CL:0000183!4.09e-11!59;CL:0000393!5.40e-10!60;CL:0000211!5.40e-10!60;CL:0002334!6.13e-10!12;CL:0000192!3.43e-09!42;CL:0000514!3.43e-09!42;CL:0000359!3.90e-09!32;CL:0000048!1.76e-08!430;CL:0000723!9.83e-08!436;CL:0000034!5.50e-07!444;CL:0000136!7.91e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.51e-15;23!CL:0002334;5.39e-12;12!CL:0000057;1.62e-09;73!CL:0002539;1.71e-07;10!CL:0000359;3.36e-07;32!CL:0002320;4.26e-07;188 | |ontology_enrichment_celltype_v019=CL:0002620;1.51e-15;23!CL:0002334;5.39e-12;12!CL:0000057;1.62e-09;73!CL:0002539;1.71e-07;10!CL:0000359;3.36e-07;32!CL:0002320;4.26e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.18e-26,76;CL:0002620,1.31e-15,23;CL:0000048,8.44e-15,427;CL:0000723,4.43e-14,433;CL:0000034,3.71e-13,441;CL:0002334,4.84e-12,12;CL:0000134,1.27e-08,354;CL:0000680,1.42e-08,58;CL:0000056,1.42e-08,58;CL:0000355,1.42e-08,58;CL:0002320,2.85e-08,361;CL:0002539,2.07e-07,10;CL:0000359,2.82e-07,32;CL:0000187,3.12e-07,55;CL:0000219,6.33e-07,386 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.67e-22!83;UBERON:0002329!6.67e-22!83;UBERON:0003077!6.67e-22!83;UBERON:0003059!6.67e-22!83;UBERON:0007282!6.67e-22!83;UBERON:0009618!6.67e-22!83;UBERON:0007285!6.67e-22!83;UBERON:0004290!2.02e-19!70;UBERON:0000486!1.65e-16!82;UBERON:0001134!6.29e-15!61;UBERON:0002036!6.29e-15!61;UBERON:0003082!6.29e-15!61;UBERON:0000475!9.38e-15!365;UBERON:0002385!1.10e-14!63;UBERON:0001015!1.10e-14!63;UBERON:0000383!1.10e-14!63;UBERON:0003102!5.42e-13!95;UBERON:0002199!3.02e-12!45;UBERON:0002416!3.02e-12!45;UBERON:0002097!6.88e-10!40;UBERON:0005256!7.50e-09!143;UBERON:0000479!1.73e-08!787;UBERON:0004573!3.23e-08!33;UBERON:0004571!3.23e-08!33;UBERON:0001013!6.45e-08!14;UBERON:0002100!2.38e-07!216;UBERON:0001637!2.39e-07!42;UBERON:0003509!2.39e-07!42;UBERON:0004572!2.39e-07!42 | |ontology_enrichment_uberon=UBERON:0000914!6.67e-22!83;UBERON:0002329!6.67e-22!83;UBERON:0003077!6.67e-22!83;UBERON:0003059!6.67e-22!83;UBERON:0007282!6.67e-22!83;UBERON:0009618!6.67e-22!83;UBERON:0007285!6.67e-22!83;UBERON:0004290!2.02e-19!70;UBERON:0000486!1.65e-16!82;UBERON:0001134!6.29e-15!61;UBERON:0002036!6.29e-15!61;UBERON:0003082!6.29e-15!61;UBERON:0000475!9.38e-15!365;UBERON:0002385!1.10e-14!63;UBERON:0001015!1.10e-14!63;UBERON:0000383!1.10e-14!63;UBERON:0003102!5.42e-13!95;UBERON:0002199!3.02e-12!45;UBERON:0002416!3.02e-12!45;UBERON:0002097!6.88e-10!40;UBERON:0005256!7.50e-09!143;UBERON:0000479!1.73e-08!787;UBERON:0004573!3.23e-08!33;UBERON:0004571!3.23e-08!33;UBERON:0001013!6.45e-08!14;UBERON:0002100!2.38e-07!216;UBERON:0001637!2.39e-07!42;UBERON:0003509!2.39e-07!42;UBERON:0004572!2.39e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.77e-11;41!UBERON:0002199;6.30e-11;46!UBERON:0002416;6.30e-11;46!UBERON:0003102;2.00e-09;50!UBERON:0002384;5.35e-09;198!UBERON:0002385;1.66e-08;31!UBERON:0001015;1.66e-08;31!UBERON:0000383;1.66e-08;31!UBERON:0001013;1.83e-08;14!UBERON:0004573;2.00e-08;33!UBERON:0004571;2.00e-08;33!UBERON:0002067;2.34e-08;9!UBERON:0004237;1.71e-07;10!UBERON:0004695;1.71e-07;10!UBERON:0002111;1.71e-07;10!UBERON:0004178;1.71e-07;10!UBERON:0000947;4.34e-07;21!UBERON:0010191;4.34e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0002097;5.77e-11;41!UBERON:0002199;6.30e-11;46!UBERON:0002416;6.30e-11;46!UBERON:0003102;2.00e-09;50!UBERON:0002384;5.35e-09;198!UBERON:0002385;1.66e-08;31!UBERON:0001015;1.66e-08;31!UBERON:0000383;1.66e-08;31!UBERON:0001013;1.83e-08;14!UBERON:0004573;2.00e-08;33!UBERON:0004571;2.00e-08;33!UBERON:0002067;2.34e-08;9!UBERON:0004237;1.71e-07;10!UBERON:0004695;1.71e-07;10!UBERON:0002111;1.71e-07;10!UBERON:0004178;1.71e-07;10!UBERON:0000947;4.34e-07;21!UBERON:0010191;4.34e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.84e-17,46;UBERON:0002416,2.84e-17,46;UBERON:0007524,2.58e-15,73;UBERON:0002329,6.81e-15,71;UBERON:0003059,6.81e-15,71;UBERON:0007282,6.81e-15,71;UBERON:0004290,6.81e-15,71;UBERON:0009618,6.81e-15,71;UBERON:0002097,1.08e-14,41;UBERON:0003077,1.65e-14,72;UBERON:0007285,1.65e-14,72;UBERON:0003102,7.53e-13,99;UBERON:0000486,1.06e-12,83;UBERON:0007503,1.96e-12,78;UBERON:0001134,8.58e-10,62;UBERON:0002036,8.58e-10,62;UBERON:0003082,8.58e-10,62;UBERON:0004573,1.92e-09,33;UBERON:0004571,1.92e-09,33;UBERON:0002385,3.35e-09,64;UBERON:0001015,3.35e-09,64;UBERON:0000383,3.35e-09,64;UBERON:0002384,6.07e-09,371;UBERON:0001013,1.20e-08,14;UBERON:0002067,1.64e-08,9;UBERON:0004016,1.64e-08,9;UBERON:0010083,1.64e-08,9;UBERON:0004237,2.07e-07,10;UBERON:0004695,2.07e-07,10;UBERON:0002111,2.07e-07,10;UBERON:0004178,2.07e-07,10;UBERON:0000947,3.79e-07,21;UBERON:0010191,3.79e-07,21;UBERON:0001637,5.90e-07,42;UBERON:0003509,5.90e-07,42;UBERON:0004572,5.90e-07,42 | |||
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| ||
|short_description=p12@PRRX1 | |short_description=p12@PRRX1 | ||
}} | }} |
Latest revision as of 14:16, 18 September 2015
Short description: | p12@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | -350bp_to_ENST00000239461_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.18e-26 | 76 |
skin fibroblast | 1.31e-15 | 23 |
multi fate stem cell | 8.44e-15 | 427 |
somatic stem cell | 4.43e-14 | 433 |
stem cell | 3.71e-13 | 441 |
preadipocyte | 4.84e-12 | 12 |
mesenchymal cell | 1.27e-08 | 354 |
muscle precursor cell | 1.42e-08 | 58 |
myoblast | 1.42e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.42e-08 | 58 |
connective tissue cell | 2.85e-08 | 361 |
aortic smooth muscle cell | 2.07e-07 | 10 |
vascular associated smooth muscle cell | 2.82e-07 | 32 |
muscle cell | 3.12e-07 | 55 |
motile cell | 6.33e-07 | 386 |