FFCP PHASE1:Hg19::chr22:49089016..49089036,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25817 | |EntrezGene=25817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21592 | |HGNC=21592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000406880_5end | |association_with_transcript=-22bp_to_ENST00000406880_5end | ||
|cluster_id=chr22:49089016..49089036,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_8_at_FAM19A5_5end | |description=CAGE_peak_8_at_FAM19A5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!4.36e-09!12;CL:0000417!4.36e-09!12;CL:0000668!4.36e-09!12;CL:0000414!4.36e-09!12;CL:0000412!4.36e-09!12;CL:0000182!4.36e-09!12 | |ontology_enrichment_celltype=CL:0000181!4.36e-09!12;CL:0000417!4.36e-09!12;CL:0000668!4.36e-09!12;CL:0000414!4.36e-09!12;CL:0000412!4.36e-09!12;CL:0000182!4.36e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.27e-44;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.27e-44;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.27e-44,12;CL:0000223,1.04e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.54e-48;11!UBERON:0009497;5.03e-41;13!UBERON:0001041;3.27e-18;30!UBERON:0003104;1.85e-17;31!UBERON:0006241;2.89e-12;3!UBERON:0003057;2.89e-12;3 | |ontology_enrichment_development_v019=UBERON:0004161;2.54e-48;11!UBERON:0009497;5.03e-41;13!UBERON:0001041;3.27e-18;30!UBERON:0003104;1.85e-17;31!UBERON:0006241;2.89e-12;3!UBERON:0003057;2.89e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;3.56e-13;39 | |ontology_enrichment_disease_v019=DOID:7;3.56e-13;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,3.69e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0002240!7.74e-20!3;UBERON:0007023!2.03e-17!115;UBERON:0003127!7.61e-14!2;UBERON:0005174!4.01e-12!5;UBERON:0001137!4.01e-12!5;UBERON:0003076!3.21e-10!15;UBERON:0003057!3.21e-10!15;UBERON:0003978!1.59e-09!3;UBERON:0009751!1.59e-09!3;UBERON:0000946!1.59e-09!3;UBERON:0002523!1.59e-09!3;UBERON:0005983!1.59e-09!3;UBERON:0002165!1.59e-09!3;UBERON:0002062!1.59e-09!3;UBERON:0007280!1.59e-09!3;UBERON:0001896!6.56e-09!3;UBERON:0005290!6.56e-09!3;UBERON:0010096!6.56e-09!3;UBERON:0003075!5.39e-08!86;UBERON:0007284!5.39e-08!86;UBERON:0002038!5.96e-08!1;UBERON:0009661!5.96e-08!1;UBERON:0000989!7.26e-08!1;UBERON:0008811!7.26e-08!1;UBERON:0006258!7.26e-08!1;UBERON:0005876!7.26e-08!1;UBERON:0004874!7.26e-08!1;UBERON:0002146!8.28e-08!1;UBERON:0005623!8.28e-08!1;UBERON:0002135!1.01e-07!1;UBERON:0002346!1.51e-07!90;UBERON:0002298!1.72e-07!8;UBERON:0003103!1.80e-07!69;UBERON:0006834!2.04e-07!1;UBERON:0007190!2.63e-07!1;UBERON:0001049!3.40e-07!57;UBERON:0005068!3.40e-07!57;UBERON:0006241!3.40e-07!57;UBERON:0007135!3.40e-07!57 | |ontology_enrichment_uberon=UBERON:0002240!7.74e-20!3;UBERON:0007023!2.03e-17!115;UBERON:0003127!7.61e-14!2;UBERON:0005174!4.01e-12!5;UBERON:0001137!4.01e-12!5;UBERON:0003076!3.21e-10!15;UBERON:0003057!3.21e-10!15;UBERON:0003978!1.59e-09!3;UBERON:0009751!1.59e-09!3;UBERON:0000946!1.59e-09!3;UBERON:0002523!1.59e-09!3;UBERON:0005983!1.59e-09!3;UBERON:0002165!1.59e-09!3;UBERON:0002062!1.59e-09!3;UBERON:0007280!1.59e-09!3;UBERON:0001896!6.56e-09!3;UBERON:0005290!6.56e-09!3;UBERON:0010096!6.56e-09!3;UBERON:0003075!5.39e-08!86;UBERON:0007284!5.39e-08!86;UBERON:0002038!5.96e-08!1;UBERON:0009661!5.96e-08!1;UBERON:0000989!7.26e-08!1;UBERON:0008811!7.26e-08!1;UBERON:0006258!7.26e-08!1;UBERON:0005876!7.26e-08!1;UBERON:0004874!7.26e-08!1;UBERON:0002146!8.28e-08!1;UBERON:0005623!8.28e-08!1;UBERON:0002135!1.01e-07!1;UBERON:0002346!1.51e-07!90;UBERON:0002298!1.72e-07!8;UBERON:0003103!1.80e-07!69;UBERON:0006834!2.04e-07!1;UBERON:0007190!2.63e-07!1;UBERON:0001049!3.40e-07!57;UBERON:0005068!3.40e-07!57;UBERON:0006241!3.40e-07!57;UBERON:0007135!3.40e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;7.05e-34;1!UBERON:0009661;7.05e-34;1!UBERON:0002950;7.05e-34;1!UBERON:0001891;7.05e-34;1!UBERON:0002107;2.49e-28;19!UBERON:0006925;2.49e-28;19!UBERON:0002423;1.03e-21;25!UBERON:0002365;1.04e-16;31!UBERON:0002330;1.04e-16;31!UBERON:0002368;3.33e-15;33!UBERON:0002240;2.89e-12;3!UBERON:0005174;2.89e-12;3!UBERON:0001137;2.89e-12;3!UBERON:0000949;1.44e-11;43!UBERON:0002417;1.07e-07;58!UBERON:0000916;1.07e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002038;7.05e-34;1!UBERON:0009661;7.05e-34;1!UBERON:0002950;7.05e-34;1!UBERON:0001891;7.05e-34;1!UBERON:0002107;2.49e-28;19!UBERON:0006925;2.49e-28;19!UBERON:0002423;1.03e-21;25!UBERON:0002365;1.04e-16;31!UBERON:0002330;1.04e-16;31!UBERON:0002368;3.33e-15;33!UBERON:0002240;2.89e-12;3!UBERON:0005174;2.89e-12;3!UBERON:0001137;2.89e-12;3!UBERON:0000949;1.44e-11;43!UBERON:0002417;1.07e-07;58!UBERON:0000916;1.07e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,9.85e-34,1;UBERON:0009661,9.85e-34,1;UBERON:0002950,9.85e-34,1;UBERON:0001891,9.85e-34,1;UBERON:0009616,9.85e-34,1;UBERON:0010286,9.85e-34,1;UBERON:0002107,2.49e-28,19;UBERON:0006925,2.49e-28,19;UBERON:0008836,2.49e-28,19;UBERON:0008835,1.43e-24,22;UBERON:0003894,1.43e-24,22;UBERON:0009854,1.55e-23,23;UBERON:0007499,1.03e-21,25;UBERON:0009497,1.03e-21,25;UBERON:0000015,1.03e-21,25;UBERON:0002423,1.03e-21,25;UBERON:0006235,1.03e-21,25;UBERON:0004161,1.03e-21,25;UBERON:0009856,6.62e-21,26;UBERON:0002365,1.20e-17,31;UBERON:0002330,1.20e-17,31;UBERON:0002368,1.05e-15,35;UBERON:0000949,2.36e-12,45;UBERON:0002240,2.59e-12,3;UBERON:0005174,2.59e-12,3;UBERON:0001137,2.59e-12,3;UBERON:0003929,2.17e-10,54;UBERON:0005172,2.17e-10,54;UBERON:0005173,2.17e-10,54;UBERON:0002530,1.49e-09,59;UBERON:0002417,2.10e-09,60;UBERON:0000916,2.10e-09,60;UBERON:0005911,5.19e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,0,1.16495949527454,11.5023446168547,9.23057613869064,11.9304272621907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,1.00337708206016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0.215166616178029,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,0,1.16495949527454,11.5023446168547,9.23057613869064,11.9304272621907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,1.00337708206016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0.215166616178029,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p8@FAM19A5 | |short_description=p8@FAM19A5 | ||
}} | }} |
Latest revision as of 07:27, 25 September 2015
Short description: | p8@FAM19A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FAM19A5_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -22bp_to_ENST00000406880_5end |
EntrezGene: | FAM19A5 |
HGNC: | 21592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.27e-44 | 12 |
endodermal cell | 1.04e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 9.85e-34 | 1 |
midbrain nucleus | 9.85e-34 | 1 |
regional part of midbrain | 9.85e-34 | 1 |
midbrain | 9.85e-34 | 1 |
presumptive midbrain | 9.85e-34 | 1 |
midbrain neural tube | 9.85e-34 | 1 |
liver | 2.49e-28 | 19 |
digestive gland | 2.49e-28 | 19 |
liver bud | 2.49e-28 | 19 |
hepatic diverticulum | 1.43e-24 | 22 |
liver primordium | 1.43e-24 | 22 |
digestive tract diverticulum | 1.55e-23 | 23 |
epithelial sac | 1.03e-21 | 25 |
epithelium of foregut-midgut junction | 1.03e-21 | 25 |
anatomical boundary | 1.03e-21 | 25 |
hepatobiliary system | 1.03e-21 | 25 |
foregut-midgut junction | 1.03e-21 | 25 |
septum transversum | 1.03e-21 | 25 |
sac | 6.62e-21 | 26 |
exocrine gland | 1.20e-17 | 31 |
exocrine system | 1.20e-17 | 31 |
endocrine gland | 1.05e-15 | 35 |
endocrine system | 2.36e-12 | 45 |
spinal cord | 2.59e-12 | 3 |
dorsal region element | 2.59e-12 | 3 |
dorsum | 2.59e-12 | 3 |
gut epithelium | 2.17e-10 | 54 |
abdomen element | 2.17e-10 | 54 |
abdominal segment element | 2.17e-10 | 54 |
gland | 1.49e-09 | 59 |
abdominal segment of trunk | 2.10e-09 | 60 |
abdomen | 2.10e-09 | 60 |
endo-epithelium | 5.19e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.69e-14 | 39 |