FFCP PHASE1:Hg19::chr3:173116225..173116242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22871 | |EntrezGene=22871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14291 | |HGNC=14291 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Q7 | |UniProt=Q8N2Q7 | ||
|association_with_transcript=0bp_to_ENST00000457714_5end | |association_with_transcript=0bp_to_ENST00000457714_5end | ||
|cluster_id=chr3:173116225..173116242,+ | |||
|coexpression_cluster_id=C1022 | |coexpression_cluster_id=C1022 | ||
|description=CAGE_peak_10_at_NLGN1_5end | |description=CAGE_peak_10_at_NLGN1_5end | ||
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|ontology_enrichment_celltype=CL:0000064!1.09e-08!3;CL:0005012!1.09e-08!3;CL:0000067!1.09e-08!3;CL:0002304!1.09e-08!3;CL:0002605!1.42e-08!3;CL:0000075!4.13e-08!27 | |ontology_enrichment_celltype=CL:0000064!1.09e-08!3;CL:0005012!1.09e-08!3;CL:0000067!1.09e-08!3;CL:0002304!1.09e-08!3;CL:0002605!1.42e-08!3;CL:0000075!4.13e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;9.74e-39;3!CL:0000067;9.74e-39;3!CL:0005012;9.74e-39;3!CL:0002304;9.74e-39;3!CL:0002605;3.94e-38;3!CL:0000306;2.08e-28;4!CL:0002222;2.08e-28;4!CL:0002224;2.08e-28;4!CL:0000128;9.32e-17;7!CL:0000126;9.32e-17;7!CL:0000127;9.32e-17;7!CL:0000075;1.96e-16;27!CL:0000342;5.49e-14;1!CL:0002565;5.49e-14;1!CL:0000243;3.17e-07;15!CL:0000125;3.17e-07;15 | |ontology_enrichment_celltype_v019=CL:0000064;9.74e-39;3!CL:0000067;9.74e-39;3!CL:0005012;9.74e-39;3!CL:0002304;9.74e-39;3!CL:0002605;3.94e-38;3!CL:0000306;2.08e-28;4!CL:0002222;2.08e-28;4!CL:0002224;2.08e-28;4!CL:0000128;9.32e-17;7!CL:0000126;9.32e-17;7!CL:0000127;9.32e-17;7!CL:0000075;1.96e-16;27!CL:0000342;5.49e-14;1!CL:0002565;5.49e-14;1!CL:0000243;3.17e-07;15!CL:0000125;3.17e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.59e-39,3;CL:0000067,8.59e-39,3;CL:0005012,8.59e-39,3;CL:0002304,8.59e-39,3;CL:0002605,3.48e-38,3;CL:0000306,1.36e-28,4;CL:0002222,1.36e-28,4;CL:0002224,1.36e-28,4;CL:0000128,8.84e-17,7;CL:0000126,8.84e-17,7;CL:0000127,8.84e-17,7;CL:0002453,8.84e-17,7;CL:0000075,1.69e-16,27;CL:0000342,5.85e-14,1;CL:0002565,5.85e-14,1;CL:0000243,3.11e-07,15;CL:0000125,3.11e-07,15;CL:0000030,3.11e-07,15;CL:0000339,3.11e-07,15;CL:0000133,3.87e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000339;3.17e-07;15 | |ontology_enrichment_development_v019=CL:0000339;3.17e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;1.87e-07;2 | |ontology_enrichment_disease_v019=DOID:4468;1.87e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,2.25e-07,2 | |||
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|short_description=p10@NLGN1 | |short_description=p10@NLGN1 | ||
}} | }} |
Latest revision as of 19:00, 16 September 2015
Short description: | p10@NLGN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NLGN1_5end |
Coexpression cluster: | C1022_Ciliary_Lens_Astrocyte_Neural_Iris_retina_Hair |
Association with transcript: | 0bp_to_ENST00000457714_5end |
EntrezGene: | NLGN1 |
HGNC: | 14291 |
UniProt: | Q8N2Q7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.59e-39 | 3 |
ciliated epithelial cell | 8.59e-39 | 3 |
multi-ciliated epithelial cell | 8.59e-39 | 3 |
non-pigmented ciliary epithelial cell | 8.59e-39 | 3 |
astrocyte of the cerebral cortex | 3.48e-38 | 3 |
crystallin accumulating cell | 1.36e-28 | 4 |
vertebrate lens cell | 1.36e-28 | 4 |
lens epithelial cell | 1.36e-28 | 4 |
oligodendrocyte | 8.84e-17 | 7 |
macroglial cell | 8.84e-17 | 7 |
astrocyte | 8.84e-17 | 7 |
oligodendrocyte precursor cell | 8.84e-17 | 7 |
columnar/cuboidal epithelial cell | 1.69e-16 | 27 |
pigment cell (sensu Vertebrata) | 5.85e-14 | 1 |
iris pigment epithelial cell | 5.85e-14 | 1 |
glial cell (sensu Vertebrata) | 3.11e-07 | 15 |
glial cell | 3.11e-07 | 15 |
glioblast | 3.11e-07 | 15 |
glioblast (sensu Vertebrata) | 3.11e-07 | 15 |
neurectodermal cell | 3.87e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.25e-07 | 2 |