FFCP PHASE1:Hg19::chr19:45978387..45978400,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2354 | |EntrezGene=2354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3797 | |HGNC=3797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_D16366_5end | |association_with_transcript=191bp_to_D16366_5end | ||
|cluster_id=chr19:45978387..45978400,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_16_at_FOSB_5end | |description=CAGE_peak_16_at_FOSB_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.24e-11!42;CL:0000738!3.23e-11!140;CL:0000860!1.68e-10!45;CL:0002087!1.96e-09!119;CL:0002031!3.89e-09!124;CL:0000557!4.17e-08!71;CL:0000766!4.25e-08!76;CL:0000037!9.48e-08!172;CL:0000566!9.48e-08!172;CL:0000839!2.03e-07!70;CL:0000623!4.31e-07!3;CL:0000825!4.31e-07!3;CL:0002032!7.96e-07!165;CL:0000837!7.96e-07!165;CL:0000988!8.81e-07!182 | |ontology_enrichment_celltype=CL:0002057!1.24e-11!42;CL:0000738!3.23e-11!140;CL:0000860!1.68e-10!45;CL:0002087!1.96e-09!119;CL:0002031!3.89e-09!124;CL:0000557!4.17e-08!71;CL:0000766!4.25e-08!76;CL:0000037!9.48e-08!172;CL:0000566!9.48e-08!172;CL:0000839!2.03e-07!70;CL:0000623!4.31e-07!3;CL:0000825!4.31e-07!3;CL:0002032!7.96e-07!165;CL:0000837!7.96e-07!165;CL:0000988!8.81e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.43e-20;5!CL:0000623;8.66e-15;3!CL:0000163;1.76e-11;9!CL:0000860;1.13e-09;33!CL:0002057;1.13e-09;33!CL:0000766;2.71e-08;69!CL:0000473;1.50e-07;39!CL:0000234;1.50e-07;39 | |ontology_enrichment_celltype_v019=CL:0000097;3.43e-20;5!CL:0000623;8.66e-15;3!CL:0000163;1.76e-11;9!CL:0000860;1.13e-09;33!CL:0002057;1.13e-09;33!CL:0000766;2.71e-08;69!CL:0000473;1.50e-07;39!CL:0000234;1.50e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.43e-20,5;CL:0002028,3.43e-20,5;CL:0000766,6.02e-16,72;CL:0000623,7.53e-15,3;CL:0000825,7.53e-15,3;CL:0000839,2.23e-14,66;CL:0000557,3.80e-14,67;CL:0000738,5.65e-13,136;CL:0002031,9.88e-13,120;CL:0000860,1.59e-11,42;CL:0002057,1.59e-11,42;CL:0000163,1.77e-11,9;CL:0002032,1.21e-10,161;CL:0000837,1.21e-10,161;CL:0000763,3.73e-10,108;CL:0000049,3.73e-10,108;CL:0000037,4.08e-10,168;CL:0000473,5.31e-10,48;CL:0000234,5.31e-10,48;CL:0000988,1.70e-09,177;CL:0002194,7.28e-08,59;CL:0000576,7.28e-08,59;CL:0000040,7.28e-08,59;CL:0000559,7.28e-08,59;CL:0002009,1.37e-07,61;CL:0002087,1.41e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.01e-11;1!CL:0002057;3.16e-08;42 | |ontology_enrichment_development_v019=UBERON:0001045;1.01e-11;1!CL:0002057;3.16e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.01e-11;1!UBERON:0001153;1.01e-11;1!UBERON:0009854;1.01e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0001154;1.01e-11;1!UBERON:0001153;1.01e-11;1!UBERON:0009854;1.01e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.48e-12,76;UBERON:0001154,1.63e-11,1;UBERON:0001153,1.63e-11,1;UBERON:0001045,1.63e-11,1;UBERON:0001474,2.43e-11,82;UBERON:0004765,3.20e-10,90;UBERON:0002405,7.52e-10,93;UBERON:0002390,2.78e-09,98;UBERON:0003061,2.78e-09,98;UBERON:0001434,4.53e-09,100;UBERON:0002193,2.67e-08,108 | |||
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| ||
|short_description=p16@FOSB | |short_description=p16@FOSB | ||
}} | }} |
Latest revision as of 18:09, 18 September 2015
Short description: | p16@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FOSB_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 191bp_to_D16366_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.43e-20 | 5 |
basophil mast progenitor cell | 3.43e-20 | 5 |
myeloid leukocyte | 6.02e-16 | 72 |
natural killer cell | 7.53e-15 | 3 |
pro-NK cell | 7.53e-15 | 3 |
myeloid lineage restricted progenitor cell | 2.23e-14 | 66 |
granulocyte monocyte progenitor cell | 3.80e-14 | 67 |
leukocyte | 5.65e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 9.88e-13 | 120 |
classical monocyte | 1.59e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-11 | 42 |
endocrine cell | 1.77e-11 | 9 |
hematopoietic oligopotent progenitor cell | 1.21e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-10 | 161 |
myeloid cell | 3.73e-10 | 108 |
common myeloid progenitor | 3.73e-10 | 108 |
hematopoietic stem cell | 4.08e-10 | 168 |
defensive cell | 5.31e-10 | 48 |
phagocyte | 5.31e-10 | 48 |
hematopoietic cell | 1.70e-09 | 177 |
monopoietic cell | 7.28e-08 | 59 |
monocyte | 7.28e-08 | 59 |
monoblast | 7.28e-08 | 59 |
promonocyte | 7.28e-08 | 59 |
macrophage dendritic cell progenitor | 1.37e-07 | 61 |
nongranular leukocyte | 1.41e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.48e-12 | 76 |
vermiform appendix | 1.63e-11 | 1 |
caecum | 1.63e-11 | 1 |
midgut | 1.63e-11 | 1 |
bone element | 2.43e-11 | 82 |
skeletal element | 3.20e-10 | 90 |
immune system | 7.52e-10 | 93 |
hematopoietic system | 2.78e-09 | 98 |
blood island | 2.78e-09 | 98 |
skeletal system | 4.53e-09 | 100 |
hemolymphoid system | 2.67e-08 | 108 |