FFCP PHASE1:Hg19::chr10:33269894..33269916,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33269894..33269916,+ | |||
|description=CAGE_peak_at_chr10:33269894..33269916,+ | |description=CAGE_peak_at_chr10:33269894..33269916,+ | ||
|id=chr10:33269894..33269916,+ | |id=chr10:33269894..33269916,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.13e-22!42;CL:0000860!1.25e-21!45;CL:0000766!1.62e-17!76;CL:0000839!4.49e-16!70;CL:0000557!1.04e-15!71;CL:0002194!1.24e-13!63;CL:0000576!1.24e-13!63;CL:0000040!1.24e-13!63;CL:0000559!1.24e-13!63;CL:0002009!5.83e-13!65;CL:0000048!2.00e-12!430;CL:0000723!2.17e-12!436;CL:0000034!1.06e-11!444;CL:0000134!4.56e-10!358;CL:0002320!5.89e-10!365;CL:0000738!8.95e-10!140;CL:0002031!1.98e-09!124;CL:0000763!2.40e-09!112;CL:0000049!2.40e-09!112;CL:0000144!2.41e-09!625;CL:0000548!1.93e-08!679;CL:0000004!1.93e-08!679;CL:0000255!1.93e-08!679;CL:0000012!2.92e-08!682;CL:0002087!4.27e-08!119;CL:0002371!6.89e-08!591;CL:0000219!1.89e-07!390;CL:0002620!6.45e-07!23 | |ontology_enrichment_celltype=CL:0002057!3.13e-22!42;CL:0000860!1.25e-21!45;CL:0000766!1.62e-17!76;CL:0000839!4.49e-16!70;CL:0000557!1.04e-15!71;CL:0002194!1.24e-13!63;CL:0000576!1.24e-13!63;CL:0000040!1.24e-13!63;CL:0000559!1.24e-13!63;CL:0002009!5.83e-13!65;CL:0000048!2.00e-12!430;CL:0000723!2.17e-12!436;CL:0000034!1.06e-11!444;CL:0000134!4.56e-10!358;CL:0002320!5.89e-10!365;CL:0000738!8.95e-10!140;CL:0002031!1.98e-09!124;CL:0000763!2.40e-09!112;CL:0000049!2.40e-09!112;CL:0000144!2.41e-09!625;CL:0000548!1.93e-08!679;CL:0000004!1.93e-08!679;CL:0000255!1.93e-08!679;CL:0000012!2.92e-08!682;CL:0002087!4.27e-08!119;CL:0002371!6.89e-08!591;CL:0000219!1.89e-07!390;CL:0002620!6.45e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-17;33!CL:0002057;1.36e-17;33!CL:0000473;5.32e-13;39!CL:0000234;5.32e-13;39!CL:0000576;5.49e-13;48!CL:0000511;2.38e-10;1!CL:0002625;2.38e-10;1!CL:0000228;2.38e-10;1!CL:0000216;2.38e-10;1!CL:0002372;2.38e-10;1!CL:0002591;2.38e-10;1!CL:1000306;3.22e-10;4!CL:0002547;3.22e-10;4!CL:0000766;6.74e-08;69!CL:0002393;4.73e-07;6!CL:0002397;4.73e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;1.36e-17;33!CL:0002057;1.36e-17;33!CL:0000473;5.32e-13;39!CL:0000234;5.32e-13;39!CL:0000576;5.49e-13;48!CL:0000511;2.38e-10;1!CL:0002625;2.38e-10;1!CL:0000228;2.38e-10;1!CL:0000216;2.38e-10;1!CL:0002372;2.38e-10;1!CL:0002591;2.38e-10;1!CL:1000306;3.22e-10;4!CL:0002547;3.22e-10;4!CL:0000766;6.74e-08;69!CL:0002393;4.73e-07;6!CL:0002397;4.73e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.42e-24,42;CL:0002057,2.42e-24,42;CL:0000473,4.31e-21,48;CL:0000234,4.31e-21,48;CL:0000839,1.37e-17,66;CL:0000557,2.66e-17,67;CL:0002194,1.55e-16,59;CL:0000576,1.55e-16,59;CL:0000040,1.55e-16,59;CL:0000559,1.55e-16,59;CL:0000766,5.51e-16,72;CL:0002009,6.01e-16,61;CL:0000511,1.43e-10,1;CL:0002625,1.43e-10,1;CL:0000216,1.43e-10,1;CL:0000228,2.08e-10,1;CL:0002372,2.08e-10,1;CL:0002591,3.96e-10,1;CL:1000306,3.97e-10,4;CL:0002547,3.97e-10,4;CL:0000763,4.60e-10,108;CL:0000049,4.60e-10,108;CL:0002031,7.16e-09,120;CL:0002087,1.01e-07,115;CL:0000738,1.32e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.46e-17;42 | |ontology_enrichment_development_v019=CL:0002057;5.46e-17;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.56e-14!80;UBERON:0001474!3.08e-13!86;UBERON:0003081!1.83e-12!216;UBERON:0002204!3.04e-11!167;UBERON:0002405!1.06e-10!115;UBERON:0004765!1.32e-10!101;UBERON:0001434!1.32e-10!101;UBERON:0002390!2.05e-10!102;UBERON:0003061!2.05e-10!102;UBERON:0002384!1.38e-09!375;UBERON:0002193!1.20e-08!112 | |ontology_enrichment_uberon=UBERON:0002371!6.56e-14!80;UBERON:0001474!3.08e-13!86;UBERON:0003081!1.83e-12!216;UBERON:0002204!3.04e-11!167;UBERON:0002405!1.06e-10!115;UBERON:0004765!1.32e-10!101;UBERON:0001434!1.32e-10!101;UBERON:0002390!2.05e-10!102;UBERON:0003061!2.05e-10!102;UBERON:0002384!1.38e-09!375;UBERON:0002193!1.20e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.38e-10;1!UBERON:0001343;2.38e-10;1!UBERON:0004910;2.38e-10;1!UBERON:0004813;2.38e-10;1!UBERON:0004797;3.22e-10;4!UBERON:0000415;3.22e-10;4!UBERON:0007240;3.22e-10;4!UBERON:0005742;3.22e-10;4!UBERON:0005734;3.22e-10;4!UBERON:0004664;3.22e-10;4!UBERON:0004663;3.22e-10;4!UBERON:0000947;3.16e-07;21!UBERON:0010191;3.16e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0001136;2.38e-10;1!UBERON:0001343;2.38e-10;1!UBERON:0004910;2.38e-10;1!UBERON:0004813;2.38e-10;1!UBERON:0004797;3.22e-10;4!UBERON:0000415;3.22e-10;4!UBERON:0007240;3.22e-10;4!UBERON:0005742;3.22e-10;4!UBERON:0005734;3.22e-10;4!UBERON:0004664;3.22e-10;4!UBERON:0004663;3.22e-10;4!UBERON:0000947;3.16e-07;21!UBERON:0010191;3.16e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.70e-15,76;UBERON:0001474,7.94e-14,82;UBERON:0003081,3.79e-13,203;UBERON:0002204,7.22e-13,167;UBERON:0004765,1.93e-12,90;UBERON:0002405,5.56e-12,93;UBERON:0002390,2.81e-11,98;UBERON:0003061,2.81e-11,98;UBERON:0001434,5.14e-11,100;UBERON:0001136,1.43e-10,1;UBERON:0001343,1.43e-10,1;UBERON:0004910,1.43e-10,1;UBERON:0005154,1.43e-10,1;UBERON:0005295,1.43e-10,1;UBERON:0004813,1.43e-10,1;UBERON:0005297,1.43e-10,1;UBERON:0005294,1.43e-10,1;UBERON:0010141,1.43e-10,1;UBERON:0005891,1.43e-10,1;UBERON:0000415,3.97e-10,4;UBERON:0007240,3.97e-10,4;UBERON:0005742,3.97e-10,4;UBERON:0005734,3.97e-10,4;UBERON:0004664,3.97e-10,4;UBERON:0004663,3.97e-10,4;UBERON:0002193,4.60e-10,108;UBERON:0000926,1.93e-08,315;UBERON:0004120,1.93e-08,315;UBERON:0006603,1.93e-08,315;UBERON:0001637,2.18e-07,42;UBERON:0003509,2.18e-07,42;UBERON:0004572,2.18e-07,42;UBERON:0000947,3.61e-07,21;UBERON:0010191,3.61e-07,21;UBERON:0004573,7.75e-07,33;UBERON:0004571,7.75e-07,33 | |||
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|short_description=p@chr10:33269894..33269916,+ | |short_description=p@chr10:33269894..33269916,+ | ||
}} | }} |
Latest revision as of 13:20, 23 July 2015
Short description: | p@chr10:33269894..33269916, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33269894..33269916, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.42e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-24 | 42 |
defensive cell | 4.31e-21 | 48 |
phagocyte | 4.31e-21 | 48 |
myeloid lineage restricted progenitor cell | 1.37e-17 | 66 |
granulocyte monocyte progenitor cell | 2.66e-17 | 67 |
monopoietic cell | 1.55e-16 | 59 |
monocyte | 1.55e-16 | 59 |
monoblast | 1.55e-16 | 59 |
promonocyte | 1.55e-16 | 59 |
myeloid leukocyte | 5.51e-16 | 72 |
macrophage dendritic cell progenitor | 6.01e-16 | 61 |
androgen binding protein secreting cell | 1.43e-10 | 1 |
seminiferous tubule epithelial cell | 1.43e-10 | 1 |
Sertoli cell | 1.43e-10 | 1 |
multinucleate cell | 2.08e-10 | 1 |
myotube | 2.08e-10 | 1 |
smooth muscle cell of the pulmonary artery | 3.96e-10 | 1 |
fibroblast of tunica adventitia of artery | 3.97e-10 | 4 |
fibroblast of the aortic adventitia | 3.97e-10 | 4 |
myeloid cell | 4.60e-10 | 108 |
common myeloid progenitor | 4.60e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 7.16e-09 | 120 |
nongranular leukocyte | 1.01e-07 | 115 |
leukocyte | 1.32e-07 | 136 |