FFCP PHASE1:Hg19::chr1:185717192..185717195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:185717192..185717195,+ | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_at_chr1:185717192..185717195,+ | |description=CAGE_peak_at_chr1:185717192..185717195,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.21e-15;1!CL:0002174;2.21e-15;1!CL:0000222;2.21e-15;1!CL:0000557;2.21e-15;1!CL:0000501;2.21e-15;1 | |ontology_enrichment_celltype_v019=CL:0002032;2.21e-15;1!CL:0002174;2.21e-15;1!CL:0000222;2.21e-15;1!CL:0000557;2.21e-15;1!CL:0000501;2.21e-15;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002174,2.06e-15,1;CL:0000501,2.06e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.98e-16;1!UBERON:0005425;2.21e-15;1 | |ontology_enrichment_development_v019=UBERON:0000358;9.98e-16;1!UBERON:0005425;2.21e-15;1 | ||
|ontology_enrichment_disease=DOID:171!4.50e-07!10 | |ontology_enrichment_disease=DOID:171!4.50e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;4.62e-36;10!DOID:3095;1.87e-16;22!DOID:2994;1.87e-16;22!DOID:1909;2.40e-08;2 | |ontology_enrichment_disease_v019=DOID:171;4.62e-36;10!DOID:3095;1.87e-16;22!DOID:2994;1.87e-16;22!DOID:1909;2.40e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:171,4.31e-36,10;DOID:3095,1.81e-16,22;DOID:2994,1.81e-16,22;DOID:1909,2.15e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.89e-58;4!UBERON:0000923;5.89e-58;4!UBERON:0010316;5.89e-58;4!UBERON:0005291;5.89e-58;4!UBERON:0002050;1.76e-46;5!UBERON:0005423;1.76e-46;5!UBERON:0000941;2.21e-15;1!UBERON:0001785;2.21e-15;1!UBERON:0002464;2.21e-15;1!UBERON:0004904;2.21e-15;1!UBERON:0001021;2.21e-15;1!UBERON:0003714;2.40e-08;2!UBERON:0005162;2.40e-08;2!UBERON:0000122;2.40e-08;2!UBERON:0000010;2.99e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0002346;5.89e-58;4!UBERON:0000923;5.89e-58;4!UBERON:0010316;5.89e-58;4!UBERON:0005291;5.89e-58;4!UBERON:0002050;1.76e-46;5!UBERON:0005423;1.76e-46;5!UBERON:0000941;2.21e-15;1!UBERON:0001785;2.21e-15;1!UBERON:0002464;2.21e-15;1!UBERON:0004904;2.21e-15;1!UBERON:0001021;2.21e-15;1!UBERON:0003714;2.40e-08;2!UBERON:0005162;2.40e-08;2!UBERON:0000122;2.40e-08;2!UBERON:0000010;2.99e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.54e-15,1;UBERON:0001785,1.54e-15,1;UBERON:0002464,1.54e-15,1;UBERON:0004904,1.54e-15,1;UBERON:0001021,1.54e-15,1;UBERON:0003902,1.54e-15,1;UBERON:0005425,1.54e-15,1;UBERON:0003714,2.00e-08,2;UBERON:0005162,2.00e-08,2;UBERON:0000122,2.00e-08,2;UBERON:0000010,2.68e-07,8 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74962768029953,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0.296521128680622,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,1.25990255782507,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,1.27746588066972,1.28929632425987,0,0,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,2.98805289526203,0,3.3946505990805,5.95209776284712,8.55156773387115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81393990975393,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.665320713092027,0.162806537221949,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr1:185717192..185717195,+ | |short_description=p@chr1:185717192..185717195,+ | ||
}} | }} |
Latest revision as of 01:28, 28 July 2015
Short description: | p@chr1:185717192..185717195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:185717192..185717195, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 2.06e-15 | 1 |
granulosa cell | 2.06e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.54e-15 | 1 |
cranial nerve | 1.54e-15 | 1 |
nerve trunk | 1.54e-15 | 1 |
nerve connecting eye with brain | 1.54e-15 | 1 |
nerve | 1.54e-15 | 1 |
retinal neural layer | 1.54e-15 | 1 |
presumptive neural retina | 1.54e-15 | 1 |
neural tissue | 2.00e-08 | 2 |
multi cell component structure | 2.00e-08 | 2 |
neuron projection bundle | 2.00e-08 | 2 |
peripheral nervous system | 2.68e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.31e-36 | 10 |
germ cell and embryonal cancer | 1.81e-16 | 22 |
germ cell cancer | 1.81e-16 | 22 |
melanoma | 2.15e-08 | 2 |