FFCP PHASE1:Hg19::chr12:7649611..7649619,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:7649611..7649619,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_at_chr12:7649611..7649619,+ | |description=CAGE_peak_at_chr12:7649611..7649619,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002009!5.86e-21!65;CL:0002194!1.31e-19!63;CL:0000576!1.31e-19!63;CL:0000040!1.31e-19!63;CL:0000559!1.31e-19!63;CL:0000557!9.11e-19!71;CL:0000839!3.54e-17!70;CL:0000766!1.90e-15!76;CL:0002619!3.38e-13!3;CL:0002057!1.75e-10!42;CL:0000235!3.47e-10!10;CL:0000763!4.32e-10!112;CL:0000049!4.32e-10!112;CL:0000860!1.29e-09!45;CL:0002087!3.43e-09!119;CL:0002031!1.19e-08!124;CL:0000738!5.52e-08!140 | |ontology_enrichment_celltype=CL:0002009!5.86e-21!65;CL:0002194!1.31e-19!63;CL:0000576!1.31e-19!63;CL:0000040!1.31e-19!63;CL:0000559!1.31e-19!63;CL:0000557!9.11e-19!71;CL:0000839!3.54e-17!70;CL:0000766!1.90e-15!76;CL:0002619!3.38e-13!3;CL:0002057!1.75e-10!42;CL:0000235!3.47e-10!10;CL:0000763!4.32e-10!112;CL:0000049!4.32e-10!112;CL:0000860!1.29e-09!45;CL:0002087!3.43e-09!119;CL:0002031!1.19e-08!124;CL:0000738!5.52e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.50e-82;6!CL:0002619;6.68e-60;3!CL:0000473;8.82e-11;39!CL:0000234;8.82e-11;39!CL:0000766;1.64e-08;69!CL:0002541;8.29e-08;3 | |ontology_enrichment_celltype_v019=CL:0000235;5.50e-82;6!CL:0002619;6.68e-60;3!CL:0000473;8.82e-11;39!CL:0000234;8.82e-11;39!CL:0000766;1.64e-08;69!CL:0002541;8.29e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.98e-82,6;CL:0002619,6.68e-60,3;CL:0002194,8.11e-21,59;CL:0000576,8.11e-21,59;CL:0000040,8.11e-21,59;CL:0000559,8.11e-21,59;CL:0002009,3.88e-20,61;CL:0000839,1.29e-18,66;CL:0000557,2.44e-18,67;CL:0000766,4.59e-17,72;CL:0000763,2.56e-11,108;CL:0000049,2.56e-11,108;CL:0002087,1.30e-10,115;CL:0000473,1.82e-10,48;CL:0000234,1.82e-10,48;CL:0002031,3.71e-10,120;CL:0000738,6.40e-09,136;CL:0002541,8.29e-08,3;CL:0002032,1.80e-07,161;CL:0000837,1.80e-07,161;CL:0000037,3.85e-07,168;CL:0000988,9.38e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.94e-21!102;UBERON:0003061!9.94e-21!102;UBERON:0002193!5.00e-20!112;UBERON:0002371!4.28e-16!80;UBERON:0002405!1.17e-14!115;UBERON:0001474!1.26e-14!86;UBERON:0004765!1.02e-11!101;UBERON:0001434!1.02e-11!101;UBERON:0003127!2.81e-08!2;UBERON:0003081!5.94e-08!216;UBERON:0007023!4.67e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!9.94e-21!102;UBERON:0003061!9.94e-21!102;UBERON:0002193!5.00e-20!112;UBERON:0002371!4.28e-16!80;UBERON:0002405!1.17e-14!115;UBERON:0001474!1.26e-14!86;UBERON:0004765!1.02e-11!101;UBERON:0001434!1.02e-11!101;UBERON:0003127!2.81e-08!2;UBERON:0003081!5.94e-08!216;UBERON:0007023!4.67e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.54e-21;1!UBERON:0003124;8.29e-08;3!UBERON:0000920;8.29e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0000029;2.54e-21;1!UBERON:0003124;8.29e-08;3!UBERON:0000920;8.29e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.30e-21,1;UBERON:0002405,1.03e-16,93;UBERON:0002371,3.66e-16,76;UBERON:0001474,5.67e-15,82;UBERON:0002193,2.31e-14,108;UBERON:0004765,1.25e-13,90;UBERON:0002390,1.69e-12,98;UBERON:0003061,1.69e-12,98;UBERON:0001434,3.03e-12,100;UBERON:0000920,8.29e-08,3;UBERON:0002204,3.46e-07,167 | |||
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| ||
|short_description=p@chr12:7649611..7649619,+ | |short_description=p@chr12:7649611..7649619,+ | ||
}} | }} |
Latest revision as of 12:27, 24 July 2015
Short description: | p@chr12:7649611..7649619, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7649611..7649619, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.98e-82 | 6 |
adult endothelial progenitor cell | 6.68e-60 | 3 |
monopoietic cell | 8.11e-21 | 59 |
monocyte | 8.11e-21 | 59 |
monoblast | 8.11e-21 | 59 |
promonocyte | 8.11e-21 | 59 |
macrophage dendritic cell progenitor | 3.88e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.29e-18 | 66 |
granulocyte monocyte progenitor cell | 2.44e-18 | 67 |
myeloid leukocyte | 4.59e-17 | 72 |
myeloid cell | 2.56e-11 | 108 |
common myeloid progenitor | 2.56e-11 | 108 |
nongranular leukocyte | 1.30e-10 | 115 |
defensive cell | 1.82e-10 | 48 |
phagocyte | 1.82e-10 | 48 |
hematopoietic lineage restricted progenitor cell | 3.71e-10 | 120 |
leukocyte | 6.40e-09 | 136 |
chorionic membrane mesenchymal stem cell | 8.29e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.80e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-07 | 161 |
hematopoietic stem cell | 3.85e-07 | 168 |
hematopoietic cell | 9.38e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.30e-21 | 1 |
immune system | 1.03e-16 | 93 |
bone marrow | 3.66e-16 | 76 |
bone element | 5.67e-15 | 82 |
hemolymphoid system | 2.31e-14 | 108 |
skeletal element | 1.25e-13 | 90 |
hematopoietic system | 1.69e-12 | 98 |
blood island | 1.69e-12 | 98 |
skeletal system | 3.03e-12 | 100 |
egg chorion | 8.29e-08 | 3 |
musculoskeletal system | 3.46e-07 | 167 |