FFCP PHASE1:Hg19::chr17:41620493..41620539,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41620493..41620539,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr17:41620493..41620539,- | |description=CAGE_peak_at_chr17:41620493..41620539,- | ||
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|ontology_enrichment_celltype=CL:0002322!3.51e-18!5;CL:0000039!8.42e-09!7;CL:0000586!8.42e-09!7;CL:0002367!5.22e-08!2 | |ontology_enrichment_celltype=CL:0002322!3.51e-18!5;CL:0000039!8.42e-09!7;CL:0000586!8.42e-09!7;CL:0002367!5.22e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.54e-47;5!CL:0000039;1.07e-22;7!CL:0000586;1.07e-22;7!CL:0002321;1.13e-15;15!CL:0000148;4.57e-09;10 | |ontology_enrichment_celltype_v019=CL:0002322;5.54e-47;5!CL:0000039;1.07e-22;7!CL:0000586;1.07e-22;7!CL:0002321;1.13e-15;15!CL:0000148;4.57e-09;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.28e-47,5;CL:0000039,1.07e-22,7;CL:0000586,1.07e-22,7;CL:0000148,4.38e-09,10;CL:0000541,4.38e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.71e-16;10!UBERON:0005564;5.71e-16;10!UBERON:0006242;8.62e-11;1 | |ontology_enrichment_development_v019=UBERON:0009117;5.71e-16;10!UBERON:0005564;5.71e-16;10!UBERON:0006242;8.62e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;5.84e-11;1!DOID:4549;5.84e-11;1!DOID:5861;5.84e-11;1!DOID:6496;5.84e-11;1!DOID:3095;6.37e-11;22!DOID:2994;6.37e-11;22 | |ontology_enrichment_disease_v019=DOID:3371;5.84e-11;1!DOID:4549;5.84e-11;1!DOID:5861;5.84e-11;1!DOID:6496;5.84e-11;1!DOID:3095;6.37e-11;22!DOID:2994;6.37e-11;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,6.10e-11,22;DOID:2994,6.10e-11,22;DOID:3371,6.14e-11,1;DOID:4549,6.14e-11,1;DOID:5861,6.14e-11,1;DOID:6496,6.14e-11,1 | |||
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| ||
|short_description=p@chr17:41620493..41620539,- | |short_description=p@chr17:41620493..41620539,- | ||
}} | }} |
Latest revision as of 17:14, 25 July 2015
Short description: | p@chr17:41620493..41620539, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41620493..41620539, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.28e-47 | 5 |
germ line cell | 1.07e-22 | 7 |
germ cell | 1.07e-22 | 7 |
melanocyte | 4.38e-09 | 10 |
melanoblast | 4.38e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 6.75e-20 | 8 |
pituitary gland | 1.41e-19 | 2 |
male reproductive organ | 1.54e-14 | 11 |
gland of diencephalon | 2.85e-10 | 4 |
neuroendocrine gland | 2.85e-10 | 4 |
gonad | 1.08e-07 | 21 |
indifferent external genitalia | 1.08e-07 | 21 |
indifferent gonad | 1.08e-07 | 21 |
gonad primordium | 1.08e-07 | 21 |
external genitalia | 2.39e-07 | 22 |
male organism | 2.39e-07 | 22 |
male reproductive system | 2.39e-07 | 22 |
body cavity or lining | 9.98e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.10e-11 | 22 |
germ cell cancer | 6.10e-11 | 22 |
chondrosarcoma | 6.14e-11 | 1 |
extraosseous chondrosarcoma | 6.14e-11 | 1 |
myxoid chondrosarcoma | 6.14e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 6.14e-11 | 1 |