FFCP PHASE1:Hg19::chr12:8851136..8851148,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:8851136..8851148,- | |||
|description=CAGE_peak_at_chr12:8851136..8851148,- | |description=CAGE_peak_at_chr12:8851136..8851148,- | ||
|id=chr12:8851136..8851148,- | |id=chr12:8851136..8851148,- | ||
|ontology_enrichment_celltype=CL:0002057!9.47e-22!42;CL:0000860!1.39e-19!45;CL:0000766!4.21e-14!76;CL:0000839!8.24e-13!70;CL:0000557!1.76e-12!71;CL:0002194!8.88e-12!63;CL:0000576!8.88e-12!63;CL:0000040!8.88e-12!63;CL:0000559!8.88e-12!63;CL:0002009!3.97e-11!65;CL:0002031!9.95e-11!124;CL:0000738!1.26e-10!140;CL:0002087!5.48e-10!119;CL:0002393!3.33e-07!9;CL:0002397!3.33e-07!9;CL:0002032!6.03e-07!165;CL:0000837!6.03e-07!165 | |ontology_enrichment_celltype=CL:0002057!9.47e-22!42;CL:0000860!1.39e-19!45;CL:0000766!4.21e-14!76;CL:0000839!8.24e-13!70;CL:0000557!1.76e-12!71;CL:0002194!8.88e-12!63;CL:0000576!8.88e-12!63;CL:0000040!8.88e-12!63;CL:0000559!8.88e-12!63;CL:0002009!3.97e-11!65;CL:0002031!9.95e-11!124;CL:0000738!1.26e-10!140;CL:0002087!5.48e-10!119;CL:0002393!3.33e-07!9;CL:0002397!3.33e-07!9;CL:0002032!6.03e-07!165;CL:0000837!6.03e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.19e-20;5!CL:0002393;8.89e-18;6!CL:0002397;8.89e-18;6!CL:0000766;1.03e-13;69!CL:0000163;1.33e-11;9!CL:0000576;7.13e-07;48!CL:0002593;8.28e-07;2 | |ontology_enrichment_celltype_v019=CL:0000097;2.19e-20;5!CL:0002393;8.89e-18;6!CL:0002397;8.89e-18;6!CL:0000766;1.03e-13;69!CL:0000163;1.33e-11;9!CL:0000576;7.13e-07;48!CL:0002593;8.28e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.27e-20,5;CL:0002028,2.27e-20,5;CL:0000766,3.04e-20,72;CL:0000839,2.83e-15,66;CL:0000557,4.97e-15,67;CL:0000763,5.24e-13,108;CL:0000049,5.24e-13,108;CL:0000860,1.99e-12,42;CL:0002057,1.99e-12,42;CL:0002393,4.85e-12,9;CL:0002397,4.85e-12,9;CL:0000738,7.44e-12,136;CL:0000163,1.36e-11,9;CL:0000473,8.55e-11,48;CL:0000234,8.55e-11,48;CL:0002032,9.85e-10,161;CL:0000837,9.85e-10,161;CL:0002031,1.43e-09,120;CL:0000037,2.99e-09,168;CL:0000988,1.10e-08,177;CL:0002194,1.68e-08,59;CL:0000576,1.68e-08,59;CL:0000040,1.68e-08,59;CL:0000559,1.68e-08,59;CL:0002009,3.32e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.83e-10;42 | |ontology_enrichment_development_v019=CL:0002057;6.83e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.24e-10!80;UBERON:0001474!6.47e-10!86;UBERON:0004765!1.59e-07!101;UBERON:0001434!1.59e-07!101;UBERON:0002390!1.89e-07!102;UBERON:0003061!1.89e-07!102;UBERON:0002405!9.25e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!6.24e-10!80;UBERON:0001474!6.47e-10!86;UBERON:0004765!1.59e-07!101;UBERON:0001434!1.59e-07!101;UBERON:0002390!1.89e-07!102;UBERON:0003061!1.89e-07!102;UBERON:0002405!9.25e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;8.28e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002456;8.28e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.04e-13,76;UBERON:0001474,4.48e-12,82;UBERON:0004765,6.77e-11,90;UBERON:0002405,1.66e-10,93;UBERON:0002390,6.61e-10,98;UBERON:0003061,6.61e-10,98;UBERON:0001434,1.11e-09,100;UBERON:0002193,7.15e-09,108;UBERON:0002204,8.34e-08,167 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,1.54816123316076,0,0.30120591877825,0,0,0.142169232487422,0,2.21598163412751,5.21415563422368,3.68918480216948,0,0,0,0.145398238779565,0.755751887377619,0.485168122375632,0.464858073811369,1.23350366406548,0,0.863077176966451,0.768482119587302,0.236482229888585,2.75796544589295,0,0,0.188242339542605,0,0.674170453335254,0.612167784741805,0,1.27867425159808,0,0.398927315243264,0.852449501065388,0.290209238628584,1.13477044938228,0,0.502497330513487,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0.838634582033504,0.22465726229299,0.150176892841506,0.64290234678832,0.285012743741249,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0.269662616320329,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,1.00883967391873,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,0,0,1.5991043280559,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.686520205190771,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.829412415681711,0,0,0,0.380805212168795,0,0.181848659202559,0.537052785212442,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0.157723490002507,0.80057074828547,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.109265571963696,0.253397002022874,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,1.54816123316076,0,0.30120591877825,0,0,0.142169232487422,0,2.21598163412751,5.21415563422368,3.68918480216948,0,0,0,0.145398238779565,0.755751887377619,0.485168122375632,0.464858073811369,1.23350366406548,0,0.863077176966451,0.768482119587302,0.236482229888585,2.75796544589295,0,0,0.188242339542605,0,0.674170453335254,0.612167784741805,0,1.27867425159808,0,0.398927315243264,0.852449501065388,0.290209238628584,1.13477044938228,0,0.502497330513487,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0.838634582033504,0.22465726229299,0.150176892841506,0.64290234678832,0.285012743741249,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0.269662616320329,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86595303986695,1.00883967391873,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,0,0,1.5991043280559,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.686520205190771,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.829412415681711,0,0,0,0.380805212168795,0,0.181848659202559,0.537052785212442,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0.157723490002507,0.80057074828547,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.109265571963696,0.253397002022874,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:8851136..8851148,- | |short_description=p@chr12:8851136..8851148,- | ||
}} | }} |
Latest revision as of 13:11, 24 July 2015
Short description: | p@chr12:8851136..8851148, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:8851136..8851148, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.27e-20 | 5 |
basophil mast progenitor cell | 2.27e-20 | 5 |
myeloid leukocyte | 3.04e-20 | 72 |
myeloid lineage restricted progenitor cell | 2.83e-15 | 66 |
granulocyte monocyte progenitor cell | 4.97e-15 | 67 |
myeloid cell | 5.24e-13 | 108 |
common myeloid progenitor | 5.24e-13 | 108 |
classical monocyte | 1.99e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.99e-12 | 42 |
intermediate monocyte | 4.85e-12 | 9 |
CD14-positive, CD16-positive monocyte | 4.85e-12 | 9 |
leukocyte | 7.44e-12 | 136 |
endocrine cell | 1.36e-11 | 9 |
defensive cell | 8.55e-11 | 48 |
phagocyte | 8.55e-11 | 48 |
hematopoietic oligopotent progenitor cell | 9.85e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.85e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.43e-09 | 120 |
hematopoietic stem cell | 2.99e-09 | 168 |
hematopoietic cell | 1.10e-08 | 177 |
monopoietic cell | 1.68e-08 | 59 |
monocyte | 1.68e-08 | 59 |
monoblast | 1.68e-08 | 59 |
promonocyte | 1.68e-08 | 59 |
macrophage dendritic cell progenitor | 3.32e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.04e-13 | 76 |
bone element | 4.48e-12 | 82 |
skeletal element | 6.77e-11 | 90 |
immune system | 1.66e-10 | 93 |
hematopoietic system | 6.61e-10 | 98 |
blood island | 6.61e-10 | 98 |
skeletal system | 1.11e-09 | 100 |
hemolymphoid system | 7.15e-09 | 108 |
musculoskeletal system | 8.34e-08 | 167 |