FFCP PHASE1:Hg19::chr22:31003217..31003228,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:31003217..31003228,+
|short_description=p9@TCN2
|description=CAGE_peak_9_at_TCN2_5end
|association_with_transcript=26bp_to_ENST00000407817_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6948 | |EntrezGene=6948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11653 | |HGNC=11653 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FD4 | |UniProt=Q96FD4 | ||
|association_with_transcript=26bp_to_ENST00000407817_5end | |||
|cluster_id=chr22:31003217..31003228,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_9_at_TCN2_5end | |||
|id=chr22:31003217..31003228,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.20e-20!35;CL:0002078!1.29e-16!44;CL:0002139!3.73e-16!24;CL:0000071!2.51e-12!18;CL:0002546!2.51e-12!18;CL:0000213!8.73e-10!57;CL:0000215!8.73e-10!57;CL:1000413!1.41e-07!9;CL:0000222!6.95e-07!119;CL:0002194!7.72e-07!63;CL:0000576!7.72e-07!63;CL:0000040!7.72e-07!63;CL:0000559!7.72e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.96e-34;36!CL:0002139;4.18e-30;24!CL:0000071;7.33e-25;18!CL:0002078;7.62e-20;45!CL:0002543;4.79e-15;6!CL:0000213;8.53e-12;58!CL:0000215;8.53e-12;58!CL:1000413;4.79e-10;9!CL:0002619;8.20e-10;3!CL:0000708;2.01e-08;3!CL:0002618;5.96e-08;3!CL:0000235;3.66e-07;6!CL:0002575;4.99e-07;2!CL:0002549;6.17e-07;2!CL:0002138;6.23e-07;6!CL:0000669;6.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.69e-39,36;CL:0002078,7.19e-30,45;CL:0002139,1.13e-29,24;CL:0000071,6.27e-25,18;CL:0002546,6.27e-25,18;CL:0000213,1.40e-21,58;CL:0000215,1.40e-21,58;CL:0002543,1.93e-15,6;CL:1000413,6.37e-10,9;CL:0002619,8.31e-10,3;CL:0000222,1.40e-09,121;CL:0000708,1.93e-08,3;CL:0002618,3.30e-08,3;CL:0000235,4.21e-07,6;CL:0002575,5.04e-07,2;CL:0002549,6.31e-07,2;CL:0000669,8.81e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;7.33e-25;18!CL:0005022;6.23e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.51e-12!18;UBERON:0004638!2.51e-12!18;UBERON:0004852!2.51e-12!18;UBERON:0000468!2.67e-11!659;UBERON:0000467!9.01e-11!625;UBERON:0000480!1.23e-10!626;UBERON:0000922!5.77e-10!612;UBERON:0000923!6.69e-10!604;UBERON:0005291!6.69e-10!604;UBERON:0006598!6.69e-10!604;UBERON:0002532!6.69e-10!604;UBERON:0002050!9.00e-10!605;UBERON:0005423!9.00e-10!605;UBERON:0002405!1.51e-09!115;UBERON:0000487!9.71e-09!22;UBERON:0000119!2.73e-08!312;UBERON:0000025!4.18e-08!194;UBERON:0006914!8.26e-08!25;UBERON:0002049!1.01e-07!79;UBERON:0007798!1.01e-07!79;UBERON:0000477!1.24e-07!286;UBERON:0003915!1.41e-07!9;UBERON:0004700!1.41e-07!9;UBERON:0001917!1.41e-07!9;UBERON:0000483!2.04e-07!309;UBERON:0003081!2.11e-07!216;UBERON:0004111!2.55e-07!241;UBERON:0000062!4.51e-07!511;UBERON:0007023!8.99e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.33e-25;18!UBERON:0001986;7.33e-25;18!UBERON:0004852;7.33e-25;18!UBERON:0000487;1.10e-19;22!UBERON:0006914;6.75e-17;25!UBERON:0000490;1.60e-12;33!UBERON:0003915;4.79e-10;9!UBERON:0004700;4.79e-10;9!UBERON:0001917;4.79e-10;9!UBERON:0001638;8.79e-10;9!UBERON:0003920;8.79e-10;9!UBERON:0004582;8.79e-10;9!UBERON:0003210;2.01e-08;3!UBERON:0005629;6.17e-07;2!UBERON:0005358;6.17e-07;2!UBERON:0001886;6.17e-07;2!UBERON:0004086;6.17e-07;2!UBERON:0005282;6.17e-07;2!UBERON:0005281;6.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.27e-25,18;UBERON:0001986,6.27e-25,18;UBERON:0004852,6.27e-25,18;UBERON:0000487,9.69e-20,22;UBERON:0006914,6.05e-17,25;UBERON:0002049,1.20e-12,78;UBERON:0007798,1.20e-12,78;UBERON:0001638,4.90e-10,9;UBERON:0003920,4.90e-10,9;UBERON:0004582,4.90e-10,9;UBERON:0003915,6.37e-10,9;UBERON:0004700,6.37e-10,9;UBERON:0001917,6.37e-10,9;UBERON:0001009,1.03e-08,112;UBERON:0000055,1.13e-08,68;UBERON:0003210,1.93e-08,3;UBERON:0004535,2.89e-08,109;UBERON:0003914,3.83e-08,117;UBERON:0005172,2.49e-07,54;UBERON:0005173,2.49e-07,54;UBERON:0003081,4.00e-07,203;UBERON:0005629,6.31e-07,2;UBERON:0005358,6.31e-07,2;UBERON:0001886,6.31e-07,2;UBERON:0004086,6.31e-07,2;UBERON:0005282,6.31e-07,2;UBERON:0005281,6.31e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0.738726348460727,0.816002764977012,0,0.286235987131057,0,0.376627918784408,0.382067028739756,0.164201178899891,0.550975469195755,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,23.5111247951921,19.4336199611388,16.4848363285879,1.74477886535478,0.377875943688809,1.21292030593908,0.697287110717054,0,1.85823822537062,0.863077176966451,0,0.47296445977717,1.72372840368309,0.645484683583826,0,1.12945403725563,1.09162460023138,0.224723484445085,0.918251677112708,0,0,0.329851300186716,0.398927315243264,1.70489900213078,0.870627715885752,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0.850417199860174,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.255725123687061,0,0,0.289693037921647,0,0,1.41802225746102,0.221729397462564,0.966182642624386,1.96468613246569,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.993812036833525,0.860234595106124,1.73570250803797,5.08777147731609,2.09749718104953,1.10047216776027,1.04497483268405,1.03366703667732,1.06729878806013,1.00416183829401,1.20848795132744,0,1.22031028774085,0.367663080345869,2.43042584364528,1.69669483739752,1.34717623575702,1.46394924628319,1.53316637465883,3.79706263827252,2.38162267109529,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.490385709340376,4.99479511228274,6.33793516927999,0.468642863667593,0,0.570471821544449,0.747243402759005,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.348581828608555,0.829288440122964,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,5.16708818237254,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,0,0.614942192715568,1.71567810298526,0,0,0,0.0925884451585296,0.651616610620649,0,0,1.04337364477569,0.117408694235822,0.721832238805369,2.31492756288305,0.951270761172991,0,0,1.72351904261178,0.468008530278475,1.0404181360211,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,1.20137223137567,0,3.02753927732474,1.30788020649984,1.39342743059805,0,3.57656445851882,0,0,0,0,0,0.799266537048298,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,2.43247561282381,2.00902836572851,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,10.3774613455252,7.89229874764969,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0.246381468041427,0,0.116210378459959,0.725156697549733,0,0,0,0.182091168006717,0.262248829918848,0,0,0.784349769176855,1.46139224653261,0.316654886678627,2.27466768141793,2.38131187387122,0.647747748306418,3.08454505380579,1.08378575017541,0.501689773854853,0.254876273045038,0,0.895499018888713,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,2.232950216158,0.316379424718726,0,0.255897791311334,0,0,0,0.359744915166629,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0.578775534266688,1.9676842561399,0.202910376962704,0.30982349809975,0,0.286822704408103,0.196498082026242,0,0,0.422215270595328,0,0,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0.398495976502139,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.424059214301822,0,0.995261931078505,1.14994833854341,2.4441205797345,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,2.41981432097328,0,1.0741718536843,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,1.06687918137261,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,2.77488893161158,0,0,0,0.171594997861965,0,0,0.707082103850386,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0.599037001496973,1.28767814440971,0,0.403100834920358,0,1.16495949527454,0,0,0,0.196854963029498,0,1.59045937961861,0.272406812223151,0,0.275078873194468,0,0,0,0.182248669974074,0,6.54087370583345,3.09482069996489,0,0.17928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| ||
|short_description=p9@TCN2 | |||
}} | }} |
Latest revision as of 18:41, 19 September 2015
Short description: | p9@TCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TCN2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 26bp_to_ENST00000407817_5end |
EntrezGene: | TCN2 |
HGNC: | 11653 |
UniProt: | Q96FD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.69e-39 | 36 |
meso-epithelial cell | 7.19e-30 | 45 |
endothelial cell of vascular tree | 1.13e-29 | 24 |
blood vessel endothelial cell | 6.27e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.27e-25 | 18 |
lining cell | 1.40e-21 | 58 |
barrier cell | 1.40e-21 | 58 |
vein endothelial cell | 1.93e-15 | 6 |
endothelial cell of artery | 6.37e-10 | 9 |
adult endothelial progenitor cell | 8.31e-10 | 3 |
mesodermal cell | 1.40e-09 | 121 |
leptomeningeal cell | 1.93e-08 | 3 |
endothelial cell of umbilical vein | 3.30e-08 | 3 |
macrophage | 4.21e-07 | 6 |
central nervous system pericyte | 5.04e-07 | 2 |
fibroblast of choroid plexus | 6.31e-07 | 2 |
pericyte cell | 8.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.27e-25 | 18 |
endothelium | 6.27e-25 | 18 |
cardiovascular system endothelium | 6.27e-25 | 18 |
simple squamous epithelium | 9.69e-20 | 22 |
squamous epithelium | 6.05e-17 | 25 |
vasculature | 1.20e-12 | 78 |
vascular system | 1.20e-12 | 78 |
vein | 4.90e-10 | 9 |
venous blood vessel | 4.90e-10 | 9 |
venous system | 4.90e-10 | 9 |
endothelial tube | 6.37e-10 | 9 |
arterial system endothelium | 6.37e-10 | 9 |
endothelium of artery | 6.37e-10 | 9 |
circulatory system | 1.03e-08 | 112 |
vessel | 1.13e-08 | 68 |
blood-cerebrospinal fluid barrier | 1.93e-08 | 3 |
cardiovascular system | 2.89e-08 | 109 |
epithelial tube | 3.83e-08 | 117 |
abdomen element | 2.49e-07 | 54 |
abdominal segment element | 2.49e-07 | 54 |
lateral plate mesoderm | 4.00e-07 | 203 |
vascular plexus | 6.31e-07 | 2 |
ventricle of nervous system | 6.31e-07 | 2 |
choroid plexus | 6.31e-07 | 2 |
brain ventricle | 6.31e-07 | 2 |
ventricular system of brain | 6.31e-07 | 2 |
ventricular system of central nervous system | 6.31e-07 | 2 |