FFCP PHASE1:Hg19::chr11:65688558..65688573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65688558..65688573,- | |||
|description=CAGE_peak_at_chr11:65688558..65688573,- | |description=CAGE_peak_at_chr11:65688558..65688573,- | ||
|id=chr11:65688558..65688573,- | |id=chr11:65688558..65688573,- | ||
|ontology_enrichment_celltype=CL:0000057!5.09e-31!75;CL:0000055!9.75e-21!180;CL:0002620!4.99e-16!23;CL:0002556!2.00e-08!6;CL:0002552!2.96e-08!5;CL:0000723!8.58e-08!436;CL:0000034!3.09e-07!444;CL:0000048!4.59e-07!430;CL:1000306!8.22e-07!4;CL:0002547!8.22e-07!4 | |ontology_enrichment_celltype=CL:0000057!5.09e-31!75;CL:0000055!9.75e-21!180;CL:0002620!4.99e-16!23;CL:0002556!2.00e-08!6;CL:0002552!2.96e-08!5;CL:0000723!8.58e-08!436;CL:0000034!3.09e-07!444;CL:0000048!4.59e-07!430;CL:1000306!8.22e-07!4;CL:0002547!8.22e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000135;2.12e-15;3!CL:0000388;2.12e-15;3!CL:0002582;3.26e-14;3!CL:1000306;4.04e-11;4!CL:0002547;4.04e-11;4!CL:0002552;4.25e-09;5!CL:0000057;1.76e-07;73!CL:0000214;2.08e-07;3!CL:0002556;3.45e-07;6 | |ontology_enrichment_celltype_v019=CL:0000135;2.12e-15;3!CL:0000388;2.12e-15;3!CL:0002582;3.26e-14;3!CL:1000306;4.04e-11;4!CL:0002547;4.04e-11;4!CL:0002552;4.25e-09;5!CL:0000057;1.76e-07;73!CL:0000214;2.08e-07;3!CL:0002556;3.45e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.12e-24,76;CL:0000135,1.93e-15,3;CL:0000388,1.93e-15,3;CL:0002582,4.20e-14,3;CL:1000306,3.53e-11,4;CL:0002547,3.53e-11,4;CL:0002552,4.56e-09,5;CL:0000214,2.02e-07,3;CL:0002556,3.45e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.22e-15;3!DOID:127;2.22e-15;3!DOID:0060072;1.19e-11;4 | |ontology_enrichment_disease_v019=DOID:0060084;2.22e-15;3!DOID:127;2.22e-15;3!DOID:0060072;1.19e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.93e-15,3;DOID:127,1.93e-15,3;DOID:0060072,1.07e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.24e-18!95;UBERON:0002199!4.75e-12!45;UBERON:0002416!4.75e-12!45;UBERON:0002097!1.19e-11!40;UBERON:0001758!2.00e-08!6;UBERON:0003672!2.00e-08!6;UBERON:0000415!8.22e-07!4;UBERON:0007240!8.22e-07!4;UBERON:0005742!8.22e-07!4;UBERON:0005734!8.22e-07!4;UBERON:0004664!8.22e-07!4;UBERON:0004663!8.22e-07!4 | |ontology_enrichment_uberon=UBERON:0003102!3.24e-18!95;UBERON:0002199!4.75e-12!45;UBERON:0002416!4.75e-12!45;UBERON:0002097!1.19e-11!40;UBERON:0001758!2.00e-08!6;UBERON:0003672!2.00e-08!6;UBERON:0000415!8.22e-07!4;UBERON:0007240!8.22e-07!4;UBERON:0005742!8.22e-07!4;UBERON:0005734!8.22e-07!4;UBERON:0004664!8.22e-07!4;UBERON:0004663!8.22e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.12e-15;3!UBERON:0000043;2.12e-15;3!UBERON:0007845;2.12e-15;3!UBERON:0004797;4.04e-11;4!UBERON:0000415;4.04e-11;4!UBERON:0007240;4.04e-11;4!UBERON:0005742;4.04e-11;4!UBERON:0005734;4.04e-11;4!UBERON:0004664;4.04e-11;4!UBERON:0004663;4.04e-11;4!UBERON:0006915;2.08e-07;3!UBERON:0007616;2.08e-07;3!UBERON:0002217;2.08e-07;3!UBERON:0002018;2.08e-07;3!UBERON:0001758;3.45e-07;6!UBERON:0003672;3.45e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0007846;2.12e-15;3!UBERON:0000043;2.12e-15;3!UBERON:0007845;2.12e-15;3!UBERON:0004797;4.04e-11;4!UBERON:0000415;4.04e-11;4!UBERON:0007240;4.04e-11;4!UBERON:0005742;4.04e-11;4!UBERON:0005734;4.04e-11;4!UBERON:0004664;4.04e-11;4!UBERON:0004663;4.04e-11;4!UBERON:0006915;2.08e-07;3!UBERON:0007616;2.08e-07;3!UBERON:0002217;2.08e-07;3!UBERON:0002018;2.08e-07;3!UBERON:0001758;3.45e-07;6!UBERON:0003672;3.45e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.93e-15,3;UBERON:0000043,1.93e-15,3;UBERON:0007845,1.93e-15,3;UBERON:0000415,3.53e-11,4;UBERON:0007240,3.53e-11,4;UBERON:0005742,3.53e-11,4;UBERON:0005734,3.53e-11,4;UBERON:0004664,3.53e-11,4;UBERON:0004663,3.53e-11,4;UBERON:0006915,2.02e-07,3;UBERON:0007616,2.02e-07,3;UBERON:0002217,2.02e-07,3;UBERON:0002018,2.02e-07,3;UBERON:0001758,3.45e-07,6;UBERON:0003672,3.45e-07,6;UBERON:0003102,4.87e-07,99 | |||
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|short_description=p@chr11:65688558..65688573,- | |short_description=p@chr11:65688558..65688573,- | ||
}} | }} |
Latest revision as of 00:54, 24 July 2015
Short description: | p@chr11:65688558..65688573, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65688558..65688573, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.12e-24 | 76 |
fibrocyte | 1.93e-15 | 3 |
tendon cell | 1.93e-15 | 3 |
visceral preadipocyte | 4.20e-14 | 3 |
fibroblast of tunica adventitia of artery | 3.53e-11 | 4 |
fibroblast of the aortic adventitia | 3.53e-11 | 4 |
fibroblast of gingiva | 4.56e-09 | 5 |
synovial cell | 2.02e-07 | 3 |
fibroblast of periodontium | 3.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.93e-15 | 3 |
tendon | 1.93e-15 | 3 |
regular connective tissue | 1.93e-15 | 3 |
artery wall | 3.53e-11 | 4 |
tunica adventitia of artery | 3.53e-11 | 4 |
adventitia | 3.53e-11 | 4 |
tunica adventitia of blood vessel | 3.53e-11 | 4 |
aorta tunica adventitia | 3.53e-11 | 4 |
aorta wall | 3.53e-11 | 4 |
stratified squamous epithelium | 2.02e-07 | 3 |
layer of synovial tissue | 2.02e-07 | 3 |
synovial joint | 2.02e-07 | 3 |
synovial membrane of synovial joint | 2.02e-07 | 3 |
periodontium | 3.45e-07 | 6 |
dentition | 3.45e-07 | 6 |
surface structure | 4.87e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.93e-15 | 3 |
leiomyoma | 1.93e-15 | 3 |
benign neoplasm | 1.07e-11 | 4 |