FFCP PHASE1:Hg19::chr22:38073174..38073215,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:38073174..38073215,-
|short_description=p@chr22:38073174..38073215,-
|description=CAGE_peak_at_chr22:38073174..38073215,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:38073174..38073215,- | |||
|coexpression_cluster_id=C615 | |||
|description=CAGE_peak_at_chr22:38073174..38073215,- | |||
|id=chr22:38073174..38073215,- | |||
|ontology_enrichment_celltype=CL:0000738!2.18e-40!140;CL:0000037!6.95e-37!172;CL:0000566!6.95e-37!172;CL:0000988!7.96e-36!182;CL:0002087!1.16e-34!119;CL:0002032!6.44e-32!165;CL:0000837!6.44e-32!165;CL:0002031!1.03e-30!124;CL:0000542!4.65e-25!53;CL:0000051!4.65e-25!53;CL:0000838!1.67e-24!52;CL:0000084!5.13e-16!25;CL:0000827!5.13e-16!25;CL:0000791!1.10e-14!18;CL:0000789!1.10e-14!18;CL:0002420!1.10e-14!18;CL:0002419!1.10e-14!18;CL:0000790!1.10e-14!18;CL:0000766!2.20e-14!76;CL:0002057!1.29e-12!42;CL:0000860!8.09e-12!45;CL:0000763!8.62e-11!112;CL:0000049!8.62e-11!112;CL:0000557!1.87e-10!71;CL:0000839!6.34e-10!70;CL:0002194!9.82e-10!63;CL:0000576!9.82e-10!63;CL:0000040!9.82e-10!63;CL:0000559!9.82e-10!63;CL:0000625!1.33e-09!11;CL:0002009!4.47e-09!65;CL:0000236!1.04e-08!14;CL:0000945!7.57e-08!24;CL:0000826!7.57e-08!24;CL:0000134!1.85e-07!358;CL:0002320!4.64e-07!365;CL:0000219!8.27e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.89e-12;13!CL:0000775;3.90e-12;3!CL:0000542;1.10e-11;53!CL:0000784;1.20e-11;3!CL:0000623;2.55e-11;3!CL:0000094;5.33e-11;8!CL:0000791;7.59e-11;18!CL:0000789;7.59e-11;18!CL:0002419;7.59e-11;18!CL:0000226;2.73e-10;3!CL:0000842;2.73e-10;3!CL:0000624;1.30e-09;6!CL:0000084;2.39e-09;25!CL:0000081;6.76e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.68e-27,136;CL:0000037,5.04e-23,168;CL:0000988,2.31e-21,177;CL:0000838,1.59e-19,52;CL:0000542,4.59e-19,53;CL:0000051,4.59e-19,53;CL:0002087,1.25e-17,115;CL:0002032,3.35e-16,161;CL:0000837,3.35e-16,161;CL:0002031,5.88e-14,120;CL:0000775,3.71e-12,3;CL:0000784,9.42e-12,3;CL:0000236,1.07e-11,14;CL:0000623,1.91e-11,3;CL:0000825,1.91e-11,3;CL:0000791,5.60e-11,18;CL:0000789,5.60e-11,18;CL:0002420,5.60e-11,18;CL:0002419,5.60e-11,18;CL:0000790,5.60e-11,18;CL:0000094,6.68e-11,8;CL:0000226,1.87e-10,3;CL:0000842,1.87e-10,3;CL:0000624,1.16e-09,6;CL:0000084,1.78e-09,25;CL:0000827,1.78e-09,25;CL:0000081,7.92e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.10e-11;53!CL:0000790;7.59e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.39e-13!102;UBERON:0003061!1.39e-13!102;UBERON:0002193!3.94e-12!112;UBERON:0002371!4.87e-09!80;UBERON:0001474!6.26e-08!86;UBERON:0002405!9.74e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.30e-08;2!UBERON:0005058;3.30e-08;2!UBERON:0009113;3.30e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.63e-08,4;UBERON:0005058,1.63e-08,4;UBERON:0009113,1.63e-08,4;UBERON:0003295,1.63e-08,4;UBERON:0005562,1.63e-08,4 | |||
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| ||
|short_description=p@chr22:38073174..38073215,- | |||
}} | }} |
Latest revision as of 21:02, 28 July 2015
Short description: | p@chr22:38073174..38073215, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:38073174..38073215, - |
Coexpression cluster: | C615_CD19_Neutrophils_Eosinophils_CD4_CD8_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.68e-27 | 136 |
hematopoietic stem cell | 5.04e-23 | 168 |
hematopoietic cell | 2.31e-21 | 177 |
lymphoid lineage restricted progenitor cell | 1.59e-19 | 52 |
lymphocyte | 4.59e-19 | 53 |
common lymphoid progenitor | 4.59e-19 | 53 |
nongranular leukocyte | 1.25e-17 | 115 |
hematopoietic oligopotent progenitor cell | 3.35e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 5.88e-14 | 120 |
neutrophil | 3.71e-12 | 3 |
plasmacytoid dendritic cell | 9.42e-12 | 3 |
B cell | 1.07e-11 | 14 |
natural killer cell | 1.91e-11 | 3 |
pro-NK cell | 1.91e-11 | 3 |
mature alpha-beta T cell | 5.60e-11 | 18 |
alpha-beta T cell | 5.60e-11 | 18 |
immature T cell | 5.60e-11 | 18 |
mature T cell | 5.60e-11 | 18 |
immature alpha-beta T cell | 5.60e-11 | 18 |
granulocyte | 6.68e-11 | 8 |
single nucleate cell | 1.87e-10 | 3 |
mononuclear cell | 1.87e-10 | 3 |
CD4-positive, alpha-beta T cell | 1.16e-09 | 6 |
T cell | 1.78e-09 | 25 |
pro-T cell | 1.78e-09 | 25 |
blood cell | 7.92e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.63e-08 | 4 |
hemolymphoid system gland | 1.63e-08 | 4 |
thymic region | 1.63e-08 | 4 |
pharyngeal gland | 1.63e-08 | 4 |
thymus primordium | 1.63e-08 | 4 |