FFCP PHASE1:Hg19::chr14:29047209..29047218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:29047209..29047218,+ | |||
|coexpression_cluster_id=C3420 | |coexpression_cluster_id=C3420 | ||
|description=CAGE_peak_at_chr14:29047209..29047218,+ | |description=CAGE_peak_at_chr14:29047209..29047218,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000515!5.69e-07!4 | |ontology_enrichment_celltype=CL:0000515!5.69e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.41e-09;3!CL:0002582;1.41e-09;3!CL:0002590;1.41e-09;3 | |ontology_enrichment_celltype_v019=CL:0000322;1.41e-09;3!CL:0002582;1.41e-09;3!CL:0002590;1.41e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.10e-09,3;CL:0002590,1.41e-09,3;CL:0002582,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.41e-09;3!UBERON:0003353;1.41e-09;3 | |ontology_enrichment_development_v019=UBERON:0009847;1.41e-09;3!UBERON:0003353;1.41e-09;3 | ||
|ontology_enrichment_disease=DOID:3908!1.77e-15!5;DOID:305!7.04e-10!106;DOID:4556!1.35e-09!3;DOID:0050687!5.39e-09!143;DOID:3905!2.03e-08!9;DOID:3910!1.38e-07!2;DOID:1324!8.28e-07!15 | |ontology_enrichment_disease=DOID:3908!1.77e-15!5;DOID:305!7.04e-10!106;DOID:4556!1.35e-09!3;DOID:0050687!5.39e-09!143;DOID:3905!2.03e-08!9;DOID:3910!1.38e-07!2;DOID:1324!8.28e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:3111;5.92e-26;1!DOID:3603;5.92e-26;1!DOID:3908;9.92e-21;5!DOID:4929;6.43e-14;2!DOID:3910;1.07e-13;2!DOID:3905;5.51e-12;9!DOID:4556;1.41e-09;3!DOID:1324;1.44e-07;15!DOID:0050615;3.78e-07;16 | |ontology_enrichment_disease_v019=DOID:3111;5.92e-26;1!DOID:3603;5.92e-26;1!DOID:3908;9.92e-21;5!DOID:4929;6.43e-14;2!DOID:3910;1.07e-13;2!DOID:3905;5.51e-12;9!DOID:4556;1.41e-09;3!DOID:1324;1.44e-07;15!DOID:0050615;3.78e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,9.79e-26,1;DOID:3603,9.79e-26,1;DOID:3908,6.01e-21,5;DOID:4929,6.43e-14,2;DOID:3910,7.30e-14,2;DOID:3905,4.18e-12,9;DOID:4556,1.19e-09,3;DOID:305,1.55e-08,106;DOID:1324,1.22e-07,15;DOID:0050615,3.24e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004903!1.38e-07!2;UBERON:0002173!1.38e-07!2;UBERON:0002186!1.38e-07!2;UBERON:0002394!3.06e-07!4;UBERON:0003928!3.06e-07!4 | |ontology_enrichment_uberon=UBERON:0004903!1.38e-07!2;UBERON:0002173!1.38e-07!2;UBERON:0002186!1.38e-07!2;UBERON:0002394!3.06e-07!4;UBERON:0003928!3.06e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.15e-26;1!UBERON:0003703;2.15e-26;1!UBERON:0001174;2.15e-26;1!UBERON:0004914;2.15e-26;1!UBERON:0004903;1.07e-13;2!UBERON:0002173;1.07e-13;2!UBERON:0002186;1.07e-13;2!UBERON:0000058;5.69e-11;10!UBERON:0002114;1.01e-09;2!UBERON:0004821;1.41e-09;3!UBERON:0007499;1.41e-09;3!UBERON:0003215;1.41e-09;3!UBERON:0010368;1.41e-09;3!UBERON:0009911;1.41e-09;3!UBERON:0002299;1.41e-09;3!UBERON:0006524;1.41e-09;3!UBERON:0008874;1.41e-09;3!UBERON:0002169;1.41e-09;3!UBERON:0004894;1.41e-09;3!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4!UBERON:0009856;1.69e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004913;2.15e-26;1!UBERON:0003703;2.15e-26;1!UBERON:0001174;2.15e-26;1!UBERON:0004914;2.15e-26;1!UBERON:0004903;1.07e-13;2!UBERON:0002173;1.07e-13;2!UBERON:0002186;1.07e-13;2!UBERON:0000058;5.69e-11;10!UBERON:0002114;1.01e-09;2!UBERON:0004821;1.41e-09;3!UBERON:0007499;1.41e-09;3!UBERON:0003215;1.41e-09;3!UBERON:0010368;1.41e-09;3!UBERON:0009911;1.41e-09;3!UBERON:0002299;1.41e-09;3!UBERON:0006524;1.41e-09;3!UBERON:0008874;1.41e-09;3!UBERON:0002169;1.41e-09;3!UBERON:0004894;1.41e-09;3!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4!UBERON:0009856;1.69e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.16e-26,1;UBERON:0003703,2.16e-26,1;UBERON:0001174,2.16e-26,1;UBERON:0004914,2.16e-26,1;UBERON:0004903,7.30e-14,2;UBERON:0002173,7.30e-14,2;UBERON:0002186,7.30e-14,2;UBERON:0002114,1.01e-09,2;UBERON:0004821,1.10e-09,3;UBERON:0003215,1.10e-09,3;UBERON:0010368,1.10e-09,3;UBERON:0009911,1.10e-09,3;UBERON:0002299,1.10e-09,3;UBERON:0006524,1.10e-09,3;UBERON:0008874,1.10e-09,3;UBERON:0002169,1.10e-09,3;UBERON:0004894,1.10e-09,3;UBERON:0005911,7.83e-08,82 | |||
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| ||
|short_description=p@chr14:29047209..29047218,+ | |short_description=p@chr14:29047209..29047218,+ | ||
}} | }} |
Latest revision as of 20:02, 24 July 2015
Short description: | p@chr14:29047209..29047218, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:29047209..29047218, + |
Coexpression cluster: | C3420_papillotubular_alveolar_anaplastic_large_prostate_pleomorphic_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.10e-09 | 3 |
smooth muscle cell of the brain vasculature | 1.41e-09 | 3 |
visceral preadipocyte | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.16e-26 | 1 |
extrahepatic bile duct | 2.16e-26 | 1 |
common bile duct | 2.16e-26 | 1 |
duodenal papilla | 2.16e-26 | 1 |
bronchoalveolar duct junction | 7.30e-14 | 2 |
alveolar duct | 7.30e-14 | 2 |
bronchiole | 7.30e-14 | 2 |
duodenum | 1.01e-09 | 2 |
pulmonary alveolus epithelium | 1.10e-09 | 3 |
alveolus | 1.10e-09 | 3 |
pulmonary lobule | 1.10e-09 | 3 |
lobule | 1.10e-09 | 3 |
alveolus of lung | 1.10e-09 | 3 |
alveolar system | 1.10e-09 | 3 |
pulmonary acinus | 1.10e-09 | 3 |
alveolar sac | 1.10e-09 | 3 |
alveolar wall | 1.10e-09 | 3 |
endo-epithelium | 7.83e-08 | 82 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 9.79e-26 | 1 |
mucinous cystadenocarcinoma | 9.79e-26 | 1 |
non-small cell lung carcinoma | 6.01e-21 | 5 |
tubular adenocarcinoma | 6.43e-14 | 2 |
lung adenocarcinoma | 7.30e-14 | 2 |
lung carcinoma | 4.18e-12 | 9 |
lung large cell carcinoma | 1.19e-09 | 3 |
carcinoma | 1.55e-08 | 106 |
lung cancer | 1.22e-07 | 15 |
respiratory system cancer | 3.24e-07 | 16 |