FFCP PHASE1:Hg19::chr22:50354412..50354431,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:50354412..50354431,+
|short_description=p1@PIM3
|description=CAGE_peak_1_at_PIM3_5end
|association_with_transcript=0bp_to_ENST00000467480_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=415116 | |EntrezGene=415116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19310 | |HGNC=19310 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467480_5end | |||
|cluster_id=chr22:50354412..50354431,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_PIM3_5end | |||
|id=chr22:50354412..50354431,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.06e-28!140;CL:0000766!6.74e-27!76;CL:0002057!7.72e-25!42;CL:0000557!6.03e-24!71;CL:0000860!4.30e-23!45;CL:0002009!5.40e-23!65;CL:0002194!7.11e-22!63;CL:0000576!7.11e-22!63;CL:0000040!7.11e-22!63;CL:0000559!7.11e-22!63;CL:0002087!1.27e-20!119;CL:0000839!4.66e-20!70;CL:0002031!1.71e-19!124;CL:0000988!1.20e-18!182;CL:0000037!2.44e-18!172;CL:0000566!2.44e-18!172;CL:0002032!2.96e-16!165;CL:0000837!2.96e-16!165;CL:0000763!2.83e-15!112;CL:0000049!2.83e-15!112;CL:0000115!1.11e-14!35;CL:0002139!1.61e-12!24;CL:0002078!2.07e-11!44;CL:0000071!3.09e-10!18;CL:0002546!3.09e-10!18;CL:0000213!4.70e-09!57;CL:0000215!4.70e-09!57;CL:0000451!5.11e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-18;33!CL:0002057;1.62e-18;33!CL:0000473;3.68e-17;39!CL:0000234;3.68e-17;39!CL:0000576;4.73e-14;48!CL:0000115;1.42e-12;36!CL:0000766;1.51e-12;69!CL:0002139;1.64e-12;24!CL:0000071;3.05e-10;18!CL:0002078;3.65e-08;45!CL:0000738;4.07e-07;136!CL:0002087;4.15e-07;104!CL:0000451;5.08e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.09e-30,136;CL:0000766,3.83e-29,72;CL:0000473,8.84e-27,48;CL:0000234,8.84e-27,48;CL:0000557,4.15e-26,67;CL:0002009,2.99e-25,61;CL:0000860,7.72e-25,42;CL:0002057,7.72e-25,42;CL:0002194,4.25e-24,59;CL:0000576,4.25e-24,59;CL:0000040,4.25e-24,59;CL:0000559,4.25e-24,59;CL:0000839,5.99e-22,66;CL:0002087,7.13e-22,115;CL:0002031,1.19e-20,120;CL:0000988,3.24e-19,177;CL:0000037,3.36e-19,168;CL:0002032,4.55e-17,161;CL:0000837,4.55e-17,161;CL:0000763,2.59e-16,108;CL:0000049,2.59e-16,108;CL:0000115,6.19e-15,36;CL:0002139,1.61e-12,24;CL:0002078,1.13e-11,45;CL:0000071,3.09e-10,18;CL:0002546,3.09e-10,18;CL:0000213,2.67e-09,58;CL:0000215,2.67e-09,58;CL:0000451,5.11e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.81e-18;42!CL:0002546;3.05e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.64e-25!112;UBERON:0002390!1.23e-22!102;UBERON:0003061!1.23e-22!102;UBERON:0002405!3.27e-20!115;UBERON:0002371!2.16e-19!80;UBERON:0001474!5.27e-18!86;UBERON:0003081!7.15e-17!216;UBERON:0004765!2.05e-11!101;UBERON:0001434!2.05e-11!101;UBERON:0001986!3.09e-10!18;UBERON:0004638!3.09e-10!18;UBERON:0004852!3.09e-10!18;UBERON:0000487!3.00e-09!22;UBERON:0006914!1.14e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.05e-10;18!UBERON:0001986;3.05e-10;18!UBERON:0004852;3.05e-10;18!UBERON:0000487;3.10e-09;22!UBERON:0006914;1.20e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.31e-26,108;UBERON:0002390,3.66e-24,98;UBERON:0003061,3.66e-24,98;UBERON:0002405,6.89e-23,93;UBERON:0002371,4.89e-21,76;UBERON:0001474,1.83e-19,82;UBERON:0003081,3.81e-18,203;UBERON:0004765,3.63e-16,90;UBERON:0001434,5.48e-12,100;UBERON:0004638,3.09e-10,18;UBERON:0001986,3.09e-10,18;UBERON:0004852,3.09e-10,18;UBERON:0000487,3.00e-09,22;UBERON:0006914,1.14e-08,25 | |||
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| ||
|short_description=p1@PIM3 | |||
}} | }} |
Latest revision as of 17:53, 15 September 2015
Short description: | p1@PIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIM3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000467480_5end |
EntrezGene: | PIM3 |
HGNC: | 19310 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.31e-26 | 108 |
hematopoietic system | 3.66e-24 | 98 |
blood island | 3.66e-24 | 98 |
immune system | 6.89e-23 | 93 |
bone marrow | 4.89e-21 | 76 |
bone element | 1.83e-19 | 82 |
lateral plate mesoderm | 3.81e-18 | 203 |
skeletal element | 3.63e-16 | 90 |
skeletal system | 5.48e-12 | 100 |
blood vessel endothelium | 3.09e-10 | 18 |
endothelium | 3.09e-10 | 18 |
cardiovascular system endothelium | 3.09e-10 | 18 |
simple squamous epithelium | 3.00e-09 | 22 |
squamous epithelium | 1.14e-08 | 25 |