FFCP PHASE1:Hg19::chr2:120517336..120517365,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:120517336..120517365,+
|short_description=p4@PTPN4
|description=CAGE_peak_4_at_PTPN4_5end
|association_with_transcript=129bp_to_ENST00000263708,NM_002830,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5775 | |EntrezGene=5775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9656 | |HGNC=9656 | ||
|TSSclassifier=strong | |||
|UniProt=P29074 | |UniProt=P29074 | ||
|association_with_transcript=129bp_to_ENST00000263708,NM_002830,uc002tmf.1_5end | |||
|cluster_id=chr2:120517336..120517365,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_PTPN4_5end | |||
|id=chr2:120517336..120517365,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.31e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-37!115;UBERON:0001049!1.33e-30!57;UBERON:0005068!1.33e-30!57;UBERON:0006241!1.33e-30!57;UBERON:0007135!1.33e-30!57;UBERON:0001017!1.19e-29!82;UBERON:0000073!3.90e-29!94;UBERON:0001016!3.90e-29!94;UBERON:0005743!7.11e-28!86;UBERON:0002616!3.10e-27!59;UBERON:0000955!2.34e-25!69;UBERON:0006238!2.34e-25!69;UBERON:0003080!2.84e-24!42;UBERON:0002780!5.68e-24!41;UBERON:0001890!5.68e-24!41;UBERON:0006240!5.68e-24!41;UBERON:0002346!6.74e-23!90;UBERON:0003075!1.68e-22!86;UBERON:0007284!1.68e-22!86;UBERON:0001893!4.05e-20!34;UBERON:0002020!4.77e-20!34;UBERON:0003528!4.77e-20!34;UBERON:0002791!1.87e-19!33;UBERON:0001869!3.43e-19!32;UBERON:0000924!7.31e-18!173;UBERON:0006601!7.31e-18!173;UBERON:0004121!2.50e-17!169;UBERON:0003056!2.22e-15!61;UBERON:0000956!7.36e-15!25;UBERON:0000203!7.36e-15!25;UBERON:0000153!1.69e-14!129;UBERON:0007811!1.69e-14!129;UBERON:0000033!2.18e-14!123;UBERON:0002619!3.46e-14!22;UBERON:0001950!6.14e-13!20;UBERON:0003076!1.58e-07!15;UBERON:0003057!1.58e-07!15;UBERON:0002420!7.32e-07!9;UBERON:0007245!7.32e-07!9;UBERON:0010009!7.32e-07!9;UBERON:0010011!7.32e-07!9;UBERON:0000454!7.32e-07!9;UBERON:0000468!7.48e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.56e-23;34!UBERON:0001869;4.70e-23;32!UBERON:0003528;5.42e-23;34!UBERON:0002020;5.42e-23;34!UBERON:0002780;5.74e-23;41!UBERON:0001890;5.74e-23;41!UBERON:0002791;7.92e-23;32!UBERON:0000073;5.74e-22;53!UBERON:0002616;5.74e-22;53!UBERON:0000956;8.82e-20;25!UBERON:0000203;8.82e-20;25!UBERON:0002619;3.11e-19;22!UBERON:0001950;1.53e-17;20!UBERON:0000955;9.27e-16;68!UBERON:0007023;2.38e-14;114!UBERON:0001017;2.47e-14;75!UBERON:0001016;3.08e-14;83!UBERON:0002420;9.94e-09;9!UBERON:0007245;9.94e-09;9!UBERON:0010009;9.94e-09;9!UBERON:0010011;9.94e-09;9!UBERON:0000454;9.94e-09;9!UBERON:0000125;1.77e-08;9!UBERON:0002308;1.77e-08;9!UBERON:0000922;2.24e-07;49!UBERON:0004732;2.55e-07;13!UBERON:0009663;4.86e-07;7!UBERON:0011216;6.32e-07;132!UBERON:0000200;6.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-51,114;UBERON:0001016,1.27e-39,89;UBERON:0001049,1.42e-39,56;UBERON:0005068,1.42e-39,56;UBERON:0006241,1.42e-39,56;UBERON:0007135,1.42e-39,56;UBERON:0001017,8.77e-38,81;UBERON:0000073,2.97e-37,53;UBERON:0002616,2.97e-37,53;UBERON:0000955,6.54e-33,68;UBERON:0006238,6.54e-33,68;UBERON:0002780,3.94e-32,41;UBERON:0001890,3.94e-32,41;UBERON:0003080,3.94e-32,41;UBERON:0006240,3.94e-32,41;UBERON:0002346,7.43e-32,86;UBERON:0003075,7.02e-31,82;UBERON:0007284,7.02e-31,82;UBERON:0001893,5.58e-27,34;UBERON:0003528,6.95e-27,34;UBERON:0002020,6.95e-27,34;UBERON:0001869,9.64e-26,32;UBERON:0002791,2.04e-25,32;UBERON:0003056,8.46e-24,61;UBERON:0004121,9.57e-24,171;UBERON:0000924,9.57e-24,171;UBERON:0006601,9.57e-24,171;UBERON:0010371,3.24e-22,104;UBERON:0011216,6.00e-22,223;UBERON:0010314,2.82e-20,132;UBERON:0000956,6.03e-20,25;UBERON:0000203,6.03e-20,25;UBERON:0002619,4.49e-19,22;UBERON:0001950,2.10e-17,20;UBERON:0000025,2.92e-10,192;UBERON:0003076,1.09e-08,15;UBERON:0003057,1.09e-08,15;UBERON:0002420,1.25e-08,9;UBERON:0007245,1.25e-08,9;UBERON:0010009,1.25e-08,9;UBERON:0010011,1.25e-08,9;UBERON:0000454,1.25e-08,9;UBERON:0004111,1.28e-08,240;UBERON:0000922,1.79e-08,592;UBERON:0000125,2.31e-08,9;UBERON:0002308,2.31e-08,9;UBERON:0002050,2.65e-08,564;UBERON:0000923,2.86e-08,560;UBERON:0010316,2.86e-08,560;UBERON:0005291,2.86e-08,560;UBERON:0006598,2.86e-08,560;UBERON:0010317,2.86e-08,560;UBERON:0002532,2.86e-08,560;UBERON:0005423,1.98e-07,581;UBERON:0004732,3.06e-07,13;UBERON:0009663,6.02e-07,7;UBERON:0000200,7.26e-07,6 | |||
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|short_description=p4@PTPN4 | |||
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Latest revision as of 17:12, 16 September 2015
Short description: | p4@PTPN4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPN4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 129bp_to_ENST00000263708, NM_002830, uc002tmf.1_5end |
EntrezGene: | PTPN4 |
HGNC: | 9656 |
UniProt: | P29074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data