FFCP PHASE1:Hg19::chr2:190446707..190446734,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:190446707..190446734,-
|short_description=p2@SLC40A1
|description=CAGE_peak_2_at_SLC40A1_5end
|association_with_transcript=13bp_to_ENST00000427419,uc010zfx...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30061 | |EntrezGene=30061 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10909 | |HGNC=10909 | ||
|TSSclassifier=strong | |||
|UniProt=Q4PNE6 | |UniProt=Q4PNE6 | ||
|association_with_transcript=13bp_to_ENST00000427419,uc010zfx.1_5end | |||
|cluster_id=chr2:190446707..190446734,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_SLC40A1_5end | |||
|id=chr2:190446707..190446734,- | |||
|ontology_enrichment_celltype=CL:0000763!1.80e-08!112;CL:0000049!1.80e-08!112;CL:0000764!3.06e-08!2;CL:0000765!3.06e-08!2;CL:0000050!3.06e-08!2;CL:0000038!3.06e-08!2;CL:0000558!3.06e-08!2;CL:0000547!3.06e-08!2;CL:0000549!3.06e-08!2;CL:0000550!3.06e-08!2;CL:0000552!3.06e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.97e-16;2!CL:0000558;9.97e-16;2!CL:0000037;4.72e-08;1!CL:0001024;4.72e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.98e-16,2;CL:0000765,9.98e-16,2;CL:0000050,9.98e-16,2;CL:0000038,9.98e-16,2;CL:0000558,9.98e-16,2;CL:0000547,9.98e-16,2;CL:0000549,9.98e-16,2;CL:0000550,9.98e-16,2;CL:0000552,9.98e-16,2;CL:0000763,5.56e-10,108;CL:0000049,5.56e-10,108;CL:0001024,5.07e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.37e-27!31;DOID:1240!5.66e-23!39;DOID:1036!5.73e-20!8;DOID:2531!1.89e-16!51;DOID:0060083!1.89e-16!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.88e-31;8!DOID:8692;6.98e-30;31!DOID:1240;5.85e-19;39!DOID:2531;1.57e-13;51!DOID:0060083;1.57e-13;51!DOID:8552;1.22e-08;1!DOID:9119;6.46e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.14e-31,8;DOID:8692,2.35e-30,31;DOID:1240,1.12e-23,39;DOID:2531,1.38e-17,51;DOID:0060083,1.38e-17,51;DOID:8552,1.22e-08,1;DOID:9119,5.82e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.67e-16!15;UBERON:0000179!6.67e-16!15;UBERON:0000463!6.67e-16!15;UBERON:0004177!4.16e-07!7;UBERON:0000341!4.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.83e-16;15!UBERON:0000179;8.83e-16;15!UBERON:0000463;8.83e-16;15!UBERON:0002390;1.89e-12;32!UBERON:0002193;3.83e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.26e-16,15;UBERON:0000179,8.26e-16,15;UBERON:0000463,8.26e-16,15 | |||
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| ||
|short_description=p2@SLC40A1 | |||
}} | }} |
Latest revision as of 02:16, 19 September 2015
Short description: | p2@SLC40A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC40A1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 13bp_to_ENST00000427419, uc010zfx.1_5end |
EntrezGene: | SLC40A1 |
HGNC: | 10909 |
UniProt: | Q4PNE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.98e-16 | 2 |
erythroblast | 9.98e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 9.98e-16 | 2 |
erythroid progenitor cell | 9.98e-16 | 2 |
reticulocyte | 9.98e-16 | 2 |
proerythroblast | 9.98e-16 | 2 |
basophilic erythroblast | 9.98e-16 | 2 |
polychromatophilic erythroblast | 9.98e-16 | 2 |
orthochromatic erythroblast | 9.98e-16 | 2 |
myeloid cell | 5.56e-10 | 108 |
common myeloid progenitor | 5.56e-10 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 8.26e-16 | 15 |
haemolymphatic fluid | 8.26e-16 | 15 |
organism substance | 8.26e-16 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.14e-31 | 8 |
myeloid leukemia | 2.35e-30 | 31 |
leukemia | 1.12e-23 | 39 |
hematologic cancer | 1.38e-17 | 51 |
immune system cancer | 1.38e-17 | 51 |
chronic myeloid leukemia | 1.22e-08 | 1 |
acute myeloid leukemia | 5.82e-08 | 1 |