FFCP PHASE1:Mm9::chr8:87493517..87493535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100504815,21672 | |EntrezGene=100504815,21672 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2912 | |MCL_coexpression_id=2912 | ||
|TSSclassifier=NA | |||
|UniProt=Q61171 | |UniProt=Q61171 | ||
|association_with_transcript=7bp_to_ENSMUST00000005292_5end | |association_with_transcript=7bp_to_ENSMUST00000005292_5end | ||
|cluster_id=chr8:87493517..87493535,+ | |||
|description=CAGE_peak_2_at_LOC100504815_5end,CAGE_peak_4_at_Prdx2_5end | |description=CAGE_peak_2_at_LOC100504815_5end,CAGE_peak_4_at_Prdx2_5end | ||
|id=chr8:87493517..87493535,+ | |id=chr8:87493517..87493535,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.51e-19!44;CL:0000133!2.51e-19!44;CL:0002319!1.11e-18!43;CL:0000055!2.31e-17!50;CL:0000540!5.30e-15!33;CL:0000047!5.30e-15!33;CL:0000031!5.30e-15!33;CL:0000404!5.30e-15!33;CL:0000393!1.67e-14!39;CL:0000211!1.67e-14!39;CL:0002321!8.37e-11!70;CL:0000220!8.37e-11!70;CL:0000117!1.16e-10!23;CL:0000337!1.16e-10!23;CL:0000548!9.06e-09!115;CL:0000004!9.06e-09!115;CL:0000255!9.06e-09!115;CL:0000144!1.81e-08!121;CL:0000012!1.81e-08!121;CL:0000723!7.06e-08!91;CL:0000048!7.06e-08!91;CL:0000034!1.32e-07!97;CL:0002371!1.35e-07!118 | |ontology_enrichment_celltype=CL:0000221!2.51e-19!44;CL:0000133!2.51e-19!44;CL:0002319!1.11e-18!43;CL:0000055!2.31e-17!50;CL:0000540!5.30e-15!33;CL:0000047!5.30e-15!33;CL:0000031!5.30e-15!33;CL:0000404!5.30e-15!33;CL:0000393!1.67e-14!39;CL:0000211!1.67e-14!39;CL:0002321!8.37e-11!70;CL:0000220!8.37e-11!70;CL:0000117!1.16e-10!23;CL:0000337!1.16e-10!23;CL:0000548!9.06e-09!115;CL:0000004!9.06e-09!115;CL:0000255!9.06e-09!115;CL:0000144!1.81e-08!121;CL:0000012!1.81e-08!121;CL:0000723!7.06e-08!91;CL:0000048!7.06e-08!91;CL:0000034!1.32e-07!97;CL:0002371!1.35e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.51e-19,44;CL:0000133,2.51e-19,44;CL:0002319,1.11e-18,43;CL:0000540,5.30e-15,33;CL:0000047,5.30e-15,33;CL:0000031,5.30e-15,33;CL:0000404,5.30e-15,33;CL:0000393,1.67e-14,39;CL:0000211,1.67e-14,39;CL:0002321,8.27e-11,70;CL:0000117,1.16e-10,23;CL:0000337,1.16e-10,23;CL:0000723,7.14e-08,91;CL:0000048,7.14e-08,91;CL:0000034,1.34e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.25e-11!73;UBERON:0005743!3.25e-11!73;UBERON:0000073!3.32e-11!75;UBERON:0001016!3.32e-11!75;UBERON:0004121!1.97e-07!102;UBERON:0000924!1.97e-07!102;UBERON:0006601!1.97e-07!102 | |ontology_enrichment_uberon=UBERON:0001017!3.25e-11!73;UBERON:0005743!3.25e-11!73;UBERON:0000073!3.32e-11!75;UBERON:0001016!3.32e-11!75;UBERON:0004121!1.97e-07!102;UBERON:0000924!1.97e-07!102;UBERON:0006601!1.97e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.25e-11,73;UBERON:0001016,3.32e-11,75;UBERON:0010314,6.88e-11,92;UBERON:0004121,2.03e-08,95;UBERON:0000924,2.03e-08,95;UBERON:0006601,2.03e-08,95;UBERON:0002346,3.52e-07,64;UBERON:0003075,3.52e-07,64;UBERON:0007284,3.52e-07,64 | |||
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| ||
|short_description=p2@LOC100504815,p4@Prdx2 | |short_description=p2@LOC100504815,p4@Prdx2 | ||
}} | }} |
Latest revision as of 22:11, 25 September 2015
Short description: | p2@LOC100504815, p4@Prdx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100504815_5end, CAGE_peak_4_at_Prdx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2912 |
Association with transcript: | 7bp_to_ENSMUST00000005292_5end |
EntrezGene: | 100504815,21672 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.51e-19 | 44 |
neurectodermal cell | 2.51e-19 | 44 |
neural cell | 1.11e-18 | 43 |
neuron | 5.30e-15 | 33 |
neuronal stem cell | 5.30e-15 | 33 |
neuroblast | 5.30e-15 | 33 |
electrically signaling cell | 5.30e-15 | 33 |
electrically responsive cell | 1.67e-14 | 39 |
electrically active cell | 1.67e-14 | 39 |
embryonic cell | 8.27e-11 | 70 |
CNS neuron (sensu Vertebrata) | 1.16e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-10 | 23 |
somatic stem cell | 7.14e-08 | 91 |
multi fate stem cell | 7.14e-08 | 91 |
stem cell | 1.34e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.25e-11 | 73 |
nervous system | 3.32e-11 | 75 |
structure with developmental contribution from neural crest | 6.88e-11 | 92 |
ectoderm-derived structure | 2.03e-08 | 95 |
ectoderm | 2.03e-08 | 95 |
presumptive ectoderm | 2.03e-08 | 95 |
neurectoderm | 3.52e-07 | 64 |
neural plate | 3.52e-07 | 64 |
presumptive neural plate | 3.52e-07 | 64 |