FFCP PHASE1:Mm9::chr15:66392559..66392629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213068 | |EntrezGene=213068 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |MCL_coexpression_id=36 | ||
|TSSclassifier=NA | |||
|UniProt=Q149F5 | |UniProt=Q149F5 | ||
|association_with_transcript=0bp_to_ENSMUST00000048372,NM_172514,uc007wad.1_5end | |association_with_transcript=0bp_to_ENSMUST00000048372,NM_172514,uc007wad.1_5end | ||
|cluster_id=chr15:66392559..66392629,- | |||
|description=CAGE_peak_1_at_Tmem71_5end | |description=CAGE_peak_1_at_Tmem71_5end | ||
|id=chr15:66392559..66392629,- | |id=chr15:66392559..66392629,- | ||
|ontology_enrichment_celltype=CL:0000988!5.02e-08!32;CL:0002032!5.02e-08!32;CL:0000037!5.02e-08!32;CL:0000566!5.02e-08!32;CL:0000837!5.02e-08!32 | |ontology_enrichment_celltype=CL:0000988!5.02e-08!32;CL:0002032!5.02e-08!32;CL:0000037!5.02e-08!32;CL:0000566!5.02e-08!32;CL:0000837!5.02e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.47e-08,32;CL:0002032,4.47e-08,32;CL:0000037,4.47e-08,32;CL:0000837,4.47e-08,32;CL:0000791,3.58e-07,9;CL:0000789,3.58e-07,9;CL:0002420,3.58e-07,9;CL:0002419,3.58e-07,9;CL:0000790,3.58e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.44e-14!193;UBERON:0004120!1.44e-14!193;UBERON:0006603!1.44e-14!193;UBERON:0003081!6.88e-12!88;UBERON:0002193!7.62e-12!48;UBERON:0002390!1.75e-11!45;UBERON:0003061!1.75e-11!45;UBERON:0002405!5.93e-11!70;UBERON:0003104!9.49e-10!131;UBERON:0009142!9.49e-10!131;UBERON:0001004!8.01e-09!42;UBERON:0004177!1.25e-08!29;UBERON:0000065!1.42e-08!41;UBERON:0000077!1.89e-08!97;UBERON:0001041!4.87e-08!92;UBERON:0005057!1.74e-07!51 | |ontology_enrichment_uberon=UBERON:0000926!1.44e-14!193;UBERON:0004120!1.44e-14!193;UBERON:0006603!1.44e-14!193;UBERON:0003081!6.88e-12!88;UBERON:0002193!7.62e-12!48;UBERON:0002390!1.75e-11!45;UBERON:0003061!1.75e-11!45;UBERON:0002405!5.93e-11!70;UBERON:0003104!9.49e-10!131;UBERON:0009142!9.49e-10!131;UBERON:0001004!8.01e-09!42;UBERON:0004177!1.25e-08!29;UBERON:0000065!1.42e-08!41;UBERON:0000077!1.89e-08!97;UBERON:0001041!4.87e-08!92;UBERON:0005057!1.74e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.40e-13,48;UBERON:0002405,5.40e-13,48;UBERON:0002390,1.34e-12,45;UBERON:0003061,1.34e-12,45;UBERON:0003081,2.07e-12,87;UBERON:0000926,2.50e-12,120;UBERON:0004120,2.50e-12,120;UBERON:0006603,2.50e-12,120;UBERON:0004177,3.72e-10,29;UBERON:0005057,3.72e-10,29;UBERON:0001004,3.88e-10,42;UBERON:0000077,7.21e-10,35;UBERON:0000065,7.31e-10,41;UBERON:0001041,3.81e-09,80;UBERON:0000072,9.65e-08,27;UBERON:0003408,1.46e-07,24;UBERON:0006562,2.02e-07,24;UBERON:0001557,2.02e-07,24;UBERON:0001042,2.02e-07,24;UBERON:0008814,2.02e-07,24;UBERON:0009145,2.02e-07,24;UBERON:0002370,2.66e-07,23;UBERON:0000974,2.66e-07,23;UBERON:0004807,2.66e-07,23;UBERON:0005058,2.66e-07,23;UBERON:0003351,2.66e-07,23;UBERON:0009113,2.66e-07,23;UBERON:0003295,2.66e-07,23;UBERON:0009722,2.66e-07,23;UBERON:0005562,2.66e-07,23;UBERON:0007690,2.66e-07,23;UBERON:0001048,3.12e-07,134 | |||
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|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,82.5098036791672,29.0024767632433,31.8327755797911,10.7867319982068,11.0883301003518,154.594259127879,133.141272884133,7.32841475994458,10.3262386368811,1.39912375625629,41.6410058272874,45.659106390711,26.3121584114779,2.63634199468316,1.09220046320974,0.783599367416806,1.11994695955385,2.06468352960453,0,0,0.430942465371778,0.760093677825496,1.51218077855958,0.886922042621219,0.635030673459631,1.84519436275371,0,0.866554859253824,0.166234645358492,0.204169356262369,259.071079426146,131.264337879998,168.574645559563,270.586484494267,260.923375254126,191.291079094275,1.1330713617802,0.506884656097573,0,0,0.218025156380447,0,0,0.279972843250725,0,18.9594344845242,91.3956298934294,96.4589203538872,1.02903774414379,1.14613375975503,0.515672092277442,0,0.528990979272033,0,0,0.889294796111139,3.1496490104849,1.97773272513395,0.7104801149461,0.898800331555214,1.53687322128622,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0,0.757261933331841,2.04043212288321,8.40607017234866,5.16254326188832,3.39985666853875,0,1.29955283489534,0.896053774194671,3.08977724289854,0,0,0,0.422530259330042,0,0,0,4.11332977921307,4.30711771307668,2.02209778005913,3.4255163915718,83.3779985343893,12.3206975423805,0.520455980298408,4.26251669636998,4.84292544237723,9.94769427647309,13.4051126134703,6.40899615781345,0.741584903203122,7.22996784599558,17.6922110389975,2.42650274921114,7.95029466457417,8.727754556434,1.86391761218122,0,1.25668024088073,4.34276993854605,22.0459829090893,7.19883277192089,18.6793233797405,1.19832511523858,0,0.376963056338593,0.521472960576829,0.767146371990992,0.83115217823824,0,0.203678727700633,13.1871388846699,0.505445516867349,1.47309299120532,0.260240885925407,0,0,0.150704817835715,0.136072998302656,0.512454881139399,0.281105173679186,1.55222022443409,0,0,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0,6.31991868581911,5.66165395652373,6.81992398549422,2.07125772535502,3.28336483973535,4.14142741360334,5.68187365404505,6.29645541591692,6.32495162838251,9.99895962426754,10.7309360559848,14.2453717687947,5.75959474697182,14.2825693748813,11.9981838127866,9.5029991826466,10.0993053033883,12.0785776884335,0.210289948564127,0.102904612379284,2.97376904685418,0.528901133327089,0.213288250535234,0.696710015581316,0.515469845288373,0.605050573870028,0.889512175379481,1.71203063501303,2.84717436926707,0.823494773620054,2.26201687920243,1.59165177632921,2.53453313254856,2.69645822596266,2.37751854862164,4.97853183135918,0.379335801906163,0.342745537829186,0,1.01825663922657,0.387904974335251,0.420814919341911,1.01178459398812,1.91893192373483,2.35498091762062,2.22114895059241,2.37162101669719,0,0.393117990226406,0.899448449539415,0.405720242777006,0.964708639009667,1.78238096246994,4.60313819921297,4.86405680325106,2.47105271869273,5.75072826109418,4.83783231969054,3.74445207737473,2.77836765741823,2.87035861635059,2.41221760681684,32.5165614693224,0.189491411770485,1.14075483509418,0.339490171550376,0.469380496577004,4.52266895092903,7.85544014923845,4.09780660501378,12.4531763843891,11.9590932410338,12.2780171866265,25.0710871515079,22.7944176062982,22.7099021972973,6.03165135757089,5.4390568381871,3.93411418415229,6.07060841870411,0.642202359951168,0.468846746368813,0,4.29200576247434,3.15508219416257,1.95219372148319,2.36965737506079,5.01834475700359,2.67358408898873,0.849229592366497,2.83367491172426,3.21481443702443,1.97643888973262,0,9.22610553853746,0.35613120733451,0.325773918707152,6.92874516484649,5.30980553359851,0.242780636154981,0.302323556964751,1.32023555829129,0.590603785761546,1.22974059177571,2.58428293168221,1.09060118843252,0.712994756769443,4.42451461110142,4.21674434299995,1.03135543248187,2.38307724027652,0.18006109403131,0,0.214337035031592,0.177340233642274,0.713475270408282,0.658196082408484,0.608929898229199,0.938686832254841,0.63549621259146,11.0264199027481,4.28704257647848,1.13025098687134,0.965006798850494,1.07435109602823,1.47726809770555,3.78925087618806,1.48340241608408,20.1627639341466,9.08102219038179,21.2973706475168,10.1718966782533,13.9428112275446,13.7266903923914,42.8345643584515,32.748639843736,32.2005938964307,0,0,1.01659733563424,1.18805874903981,0.418176592028937,0.87345025498471,0.539457385539283,1.81837602595739,2.09404753587224,2.07383957266869,5.59205381778233,0.56369293868419,0,0.330916980914195,0.972255941720238,0.129159823477731,0.506868376472335,1.05621514781179,1.17183946359555,1.67774951081137,0.966336483304024,0.864090018773596,21.1727450820879,1.82452693761148,3.28675062927447,4.41730798124503,5.37080087002444,8.14593554603186,9.73583141111748,9.15675068482379,9.69277919502217,12.65032990473,10.6875756245051,14.0339348265243,16.356013078856,28.5179641323028,3.40095575422817,0,0,0,4.44336066274038,5.63047426353546,4.029335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| ||
|short_description=p1@Tmem71 | |short_description=p1@Tmem71 | ||
}} | }} |
Latest revision as of 21:59, 26 September 2015
Short description: | p1@Tmem71 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem71_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000048372, NM_172514, uc007wad.1_5end |
EntrezGene: | Tmem71 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.47e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.47e-08 | 32 |
hematopoietic stem cell | 4.47e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.47e-08 | 32 |
mature alpha-beta T cell | 3.58e-07 | 9 |
alpha-beta T cell | 3.58e-07 | 9 |
immature T cell | 3.58e-07 | 9 |
mature T cell | 3.58e-07 | 9 |
immature alpha-beta T cell | 3.58e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.40e-13 | 48 |
immune system | 5.40e-13 | 48 |
hematopoietic system | 1.34e-12 | 45 |
blood island | 1.34e-12 | 45 |
lateral plate mesoderm | 2.07e-12 | 87 |
mesoderm | 2.50e-12 | 120 |
mesoderm-derived structure | 2.50e-12 | 120 |
presumptive mesoderm | 2.50e-12 | 120 |
hemopoietic organ | 3.72e-10 | 29 |
immune organ | 3.72e-10 | 29 |
respiratory system | 3.88e-10 | 42 |
mixed endoderm/mesoderm-derived structure | 7.21e-10 | 35 |
respiratory tract | 7.31e-10 | 41 |
foregut | 3.81e-09 | 80 |
segment of respiratory tract | 9.65e-08 | 27 |
gland of gut | 1.46e-07 | 24 |
pharynx | 2.02e-07 | 24 |
upper respiratory tract | 2.02e-07 | 24 |
chordate pharynx | 2.02e-07 | 24 |
pharyngeal arch system | 2.02e-07 | 24 |
pharyngeal region of foregut | 2.02e-07 | 24 |
thymus | 2.66e-07 | 23 |
neck | 2.66e-07 | 23 |
respiratory system epithelium | 2.66e-07 | 23 |
hemolymphoid system gland | 2.66e-07 | 23 |
pharyngeal epithelium | 2.66e-07 | 23 |
thymic region | 2.66e-07 | 23 |
pharyngeal gland | 2.66e-07 | 23 |
entire pharyngeal arch endoderm | 2.66e-07 | 23 |
thymus primordium | 2.66e-07 | 23 |
early pharyngeal endoderm | 2.66e-07 | 23 |
primordium | 3.12e-07 | 134 |