FFCP PHASE1:Mm9::chr2:34228111..34228118,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2346 | |MCL_coexpression_id=2346 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:34228111..34228118,- | |||
|description=CAGE_peak_at_chr2:34228111..34228118,- | |description=CAGE_peak_at_chr2:34228111..34228118,- | ||
|id=chr2:34228111..34228118,- | |id=chr2:34228111..34228118,- | ||
|ontology_enrichment_celltype=CL:0000117!4.97e-11!23;CL:0000337!4.97e-11!23;CL:0000393!1.69e-10!39;CL:0000211!1.69e-10!39;CL:0000540!3.80e-10!33;CL:0000047!3.80e-10!33;CL:0000031!3.80e-10!33;CL:0000404!3.80e-10!33 | |ontology_enrichment_celltype=CL:0000117!4.97e-11!23;CL:0000337!4.97e-11!23;CL:0000393!1.69e-10!39;CL:0000211!1.69e-10!39;CL:0000540!3.80e-10!33;CL:0000047!3.80e-10!33;CL:0000031!3.80e-10!33;CL:0000404!3.80e-10!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-28,23;CL:0000337,1.88e-28,23;CL:0000540,4.92e-19,33;CL:0000047,4.92e-19,33;CL:0000031,4.92e-19,33;CL:0000404,4.92e-19,33;CL:0000393,1.07e-15,39;CL:0000211,1.07e-15,39;CL:0002319,5.45e-14,43;CL:0000221,1.30e-13,44;CL:0000133,1.30e-13,44;CL:0000120,2.10e-12,3;CL:0002613,2.37e-11,3;CL:0002611,2.50e-08,2;CL:0002321,1.43e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.23e-10!71;UBERON:0003075!3.23e-10!71;UBERON:0007284!3.23e-10!71;UBERON:0004121!3.82e-09!102;UBERON:0000924!3.82e-09!102;UBERON:0006601!3.82e-09!102 | |ontology_enrichment_uberon=UBERON:0002346!3.23e-10!71;UBERON:0003075!3.23e-10!71;UBERON:0007284!3.23e-10!71;UBERON:0004121!3.82e-09!102;UBERON:0000924!3.82e-09!102;UBERON:0006601!3.82e-09!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.97e-12,5;UBERON:0002315,5.97e-12,5;UBERON:0000369,1.38e-11,5;UBERON:0002435,1.38e-11,5;UBERON:0000204,1.38e-11,5;UBERON:0010082,1.38e-11,5;UBERON:0002020,7.74e-11,34;UBERON:0002420,8.24e-11,8;UBERON:0007245,8.24e-11,8;UBERON:0010009,8.24e-11,8;UBERON:0010011,8.24e-11,8;UBERON:0000454,8.24e-11,8;UBERON:0002240,5.63e-10,6;UBERON:0005174,5.63e-10,6;UBERON:0001137,5.63e-10,6;UBERON:0001017,8.67e-10,73;UBERON:0001016,1.91e-09,75;UBERON:0002369,1.46e-08,7;UBERON:0006858,1.46e-08,7;UBERON:0002256,2.50e-08,2;UBERON:0004121,7.08e-08,95;UBERON:0000924,7.08e-08,95;UBERON:0006601,7.08e-08,95;UBERON:0000073,2.49e-07,54;UBERON:0010314,5.46e-07,92 | |||
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| ||
|short_description=p@chr2:34228111..34228118,- | |short_description=p@chr2:34228111..34228118,- | ||
}} | }} |
Latest revision as of 02:25, 5 August 2015
Short description: | p@chr2:34228111..34228118, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:34228111..34228118, - |
Coexpression cluster: | MCL_coexpression_mm9:2346 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.88e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.88e-28 | 23 |
neuron | 4.92e-19 | 33 |
neuronal stem cell | 4.92e-19 | 33 |
neuroblast | 4.92e-19 | 33 |
electrically signaling cell | 4.92e-19 | 33 |
electrically responsive cell | 1.07e-15 | 39 |
electrically active cell | 1.07e-15 | 39 |
neural cell | 5.45e-14 | 43 |
ectodermal cell | 1.30e-13 | 44 |
neurectodermal cell | 1.30e-13 | 44 |
granule cell | 2.10e-12 | 3 |
striatum neuron | 2.37e-11 | 3 |
neuron of the dorsal spinal cord | 2.50e-08 | 2 |
embryonic cell | 1.43e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 5.97e-12 | 5 |
gray matter of spinal cord | 5.97e-12 | 5 |
corpus striatum | 1.38e-11 | 5 |
striatum | 1.38e-11 | 5 |
ventral part of telencephalon | 1.38e-11 | 5 |
future corpus striatum | 1.38e-11 | 5 |
gray matter | 7.74e-11 | 34 |
basal ganglion | 8.24e-11 | 8 |
nuclear complex of neuraxis | 8.24e-11 | 8 |
aggregate regional part of brain | 8.24e-11 | 8 |
collection of basal ganglia | 8.24e-11 | 8 |
cerebral subcortex | 8.24e-11 | 8 |
spinal cord | 5.63e-10 | 6 |
dorsal region element | 5.63e-10 | 6 |
dorsum | 5.63e-10 | 6 |
central nervous system | 8.67e-10 | 73 |
nervous system | 1.91e-09 | 75 |
adrenal gland | 1.46e-08 | 7 |
adrenal/interrenal gland | 1.46e-08 | 7 |
dorsal horn of spinal cord | 2.50e-08 | 2 |
ectoderm-derived structure | 7.08e-08 | 95 |
ectoderm | 7.08e-08 | 95 |
presumptive ectoderm | 7.08e-08 | 95 |
regional part of nervous system | 2.49e-07 | 54 |
structure with developmental contribution from neural crest | 5.46e-07 | 92 |