FFCP PHASE1:Hg19::chr2:26407857..26407913,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:26407857..26407913,+
|short_description=p1@FAM59B
|description=CAGE_peak_1_at_FAM59B_5end
|association_with_transcript=-187bp_to_ENST00000496070_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150946 | |EntrezGene=150946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27172 | |HGNC=27172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-187bp_to_ENST00000496070_5end | |||
|cluster_id=chr2:26407857..26407913,+ | |||
|description=CAGE_peak_1_at_FAM59B_5end | |||
|id=chr2:26407857..26407913,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.46e-15!180;CL:0000183!8.18e-13!59;CL:0000359!8.06e-12!32;CL:0000680!8.89e-12!57;CL:0000056!8.89e-12!57;CL:0000355!8.89e-12!57;CL:0000187!1.28e-11!54;CL:0000192!1.80e-11!42;CL:0000514!1.80e-11!42;CL:0000393!1.33e-09!60;CL:0000211!1.33e-09!60;CL:0000222!1.06e-08!119;CL:0000057!3.65e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.31e-11;32!CL:0000192;1.42e-08;43!CL:0000327;2.61e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.08e-12,32;CL:0000192,4.21e-12,43;CL:0000514,4.21e-12,43;CL:0000680,1.71e-11,58;CL:0000056,1.71e-11,58;CL:0000355,1.71e-11,58;CL:0000187,2.68e-11,55;CL:0000393,1.20e-08,61;CL:0000211,1.20e-08,61;CL:0000222,4.05e-08,121;CL:0000057,4.12e-08,76;CL:0000327,2.22e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.42e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.38e-18!84;UBERON:0001637!2.45e-16!42;UBERON:0003509!2.45e-16!42;UBERON:0004572!2.45e-16!42;UBERON:0001981!3.90e-16!60;UBERON:0007500!3.90e-16!60;UBERON:0004537!3.90e-16!60;UBERON:0006965!3.90e-16!60;UBERON:0002049!1.08e-15!79;UBERON:0007798!1.08e-15!79;UBERON:0000055!5.85e-14!69;UBERON:0001009!7.08e-14!113;UBERON:0004535!1.26e-13!110;UBERON:0003914!1.07e-12!118;UBERON:0004573!1.23e-12!33;UBERON:0004571!1.23e-12!33;UBERON:0001134!1.24e-12!61;UBERON:0002036!1.24e-12!61;UBERON:0003082!1.24e-12!61;UBERON:0002385!1.37e-12!63;UBERON:0001015!1.37e-12!63;UBERON:0000383!1.37e-12!63;UBERON:0000914!2.91e-12!83;UBERON:0002329!2.91e-12!83;UBERON:0003077!2.91e-12!83;UBERON:0003059!2.91e-12!83;UBERON:0007282!2.91e-12!83;UBERON:0009618!2.91e-12!83;UBERON:0007285!2.91e-12!83;UBERON:0004290!3.97e-12!70;UBERON:0000486!5.26e-11!82;UBERON:0005256!9.66e-10!143;UBERON:0000490!5.67e-09!138;UBERON:0000947!1.18e-07!21;UBERON:0010191!1.18e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.22e-12;42!UBERON:0003509;2.22e-12;42!UBERON:0004572;2.22e-12;42!UBERON:0004573;2.82e-12;33!UBERON:0004571;2.82e-12;33!UBERON:0000947;4.10e-08;21!UBERON:0010191;4.10e-08;21!UBERON:0007500;4.63e-08;56!UBERON:0001981;4.63e-08;56!UBERON:0004537;4.63e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.12e-18,83;UBERON:0001637,1.35e-17,42;UBERON:0003509,1.35e-17,42;UBERON:0004572,1.35e-17,42;UBERON:0007500,2.35e-16,59;UBERON:0001981,2.35e-16,59;UBERON:0004537,2.35e-16,59;UBERON:0006965,2.35e-16,59;UBERON:0002049,1.26e-14,78;UBERON:0007798,1.26e-14,78;UBERON:0004573,1.40e-13,33;UBERON:0004571,1.40e-13,33;UBERON:0003914,1.94e-13,117;UBERON:0000055,4.90e-13,68;UBERON:0001134,2.08e-12,62;UBERON:0002036,2.08e-12,62;UBERON:0003082,2.08e-12,62;UBERON:0001009,2.53e-12,112;UBERON:0004535,2.80e-12,109;UBERON:0007503,2.81e-12,78;UBERON:0002385,4.21e-12,64;UBERON:0001015,4.21e-12,64;UBERON:0000383,4.21e-12,64;UBERON:0002329,5.98e-12,71;UBERON:0003059,5.98e-12,71;UBERON:0007282,5.98e-12,71;UBERON:0004290,5.98e-12,71;UBERON:0009618,5.98e-12,71;UBERON:0007524,1.04e-11,73;UBERON:0003077,1.86e-11,72;UBERON:0007285,1.86e-11,72;UBERON:0000486,2.35e-10,83;UBERON:0000490,1.90e-09,148;UBERON:0003104,2.83e-09,160;UBERON:0009142,2.83e-09,160;UBERON:0005256,1.40e-08,122;UBERON:0000947,3.56e-08,21;UBERON:0010191,3.56e-08,21 | |||
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| ||
|short_description=p1@FAM59B | |||
}} | }} |
Latest revision as of 14:49, 16 September 2015
Short description: | p1@FAM59B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM59B_5end |
Coexpression cluster: | NA |
Association with transcript: | -187bp_to_ENST00000496070_5end |
EntrezGene: | FAM59B |
HGNC: | 27172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.08e-12 | 32 |
smooth muscle cell | 4.21e-12 | 43 |
smooth muscle myoblast | 4.21e-12 | 43 |
muscle precursor cell | 1.71e-11 | 58 |
myoblast | 1.71e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.71e-11 | 58 |
muscle cell | 2.68e-11 | 55 |
electrically responsive cell | 1.20e-08 | 61 |
electrically active cell | 1.20e-08 | 61 |
mesodermal cell | 4.05e-08 | 121 |
fibroblast | 4.12e-08 | 76 |
extracellular matrix secreting cell | 2.22e-07 | 15 |