FFCP PHASE1:Hg19::chr2:85888627..85888660,-: Difference between revisions
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|id=chr2:85888627..85888660,-
|short_description=p6@SFTPB
|description=CAGE_peak_6_at_SFTPB_5end
|association_with_transcript=0bp_to_uc010ysw.1_5end
|EntrezGene=64...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6439 | |EntrezGene=6439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10801 | |HGNC=10801 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010ysw.1_5end | |||
|cluster_id=chr2:85888627..85888660,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_6_at_SFTPB_5end | |||
|id=chr2:85888627..85888660,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.48e-11;29!UBERON:0001041;9.89e-11;30!UBERON:0007123;7.49e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.60e-17!22;UBERON:0000117!1.60e-17!22;UBERON:0000171!1.60e-17!22;UBERON:0000170!1.60e-17!22;UBERON:0005597!1.60e-17!22;UBERON:0000118!1.60e-17!22;UBERON:0002171!4.72e-17!1;UBERON:0006518!4.72e-17!1;UBERON:0008949!4.72e-17!1;UBERON:0000101!4.72e-17!1;UBERON:0002167!4.72e-17!1;UBERON:0005178!2.35e-11!34;UBERON:0002224!2.35e-11!34;UBERON:0005181!4.95e-11!35;UBERON:0005153!1.95e-10!37;UBERON:0008947!3.68e-10!38;UBERON:0003258!3.68e-10!38;UBERON:0005157!1.46e-07!51;UBERON:0000915!2.05e-07!52;UBERON:0000065!2.83e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.84e-34;1!UBERON:0006518;1.84e-34;1!UBERON:0008949;1.84e-34;1!UBERON:0000101;1.84e-34;1!UBERON:0002167;1.84e-34;1!UBERON:0002048;2.38e-14;22!UBERON:0000117;2.38e-14;22!UBERON:0000171;2.38e-14;22!UBERON:0000170;2.38e-14;22!UBERON:0005178;1.35e-08;34!UBERON:0002224;1.35e-08;34!UBERON:0002046;7.49e-08;5!UBERON:0000065;5.41e-07;44!UBERON:0005181;6.89e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0002048,2.38e-14,22;UBERON:0000117,2.38e-14,22;UBERON:0000171,2.38e-14,22;UBERON:0000170,2.38e-14,22;UBERON:0005597,2.38e-14,22;UBERON:0000118,2.38e-14,22;UBERON:0005178,1.48e-09,34;UBERON:0002224,1.48e-09,34;UBERON:0005181,2.65e-09,35;UBERON:0005153,7.74e-09,37;UBERON:0008947,1.27e-08,38;UBERON:0003258,1.27e-08,38;UBERON:0002046,7.49e-08,5;UBERON:0004117,7.49e-08,5;UBERON:0007689,7.49e-08,5;UBERON:0007123,7.49e-08,5;UBERON:0003091,7.49e-08,5;UBERON:0005157,4.22e-07,47;UBERON:0005911,5.27e-07,82 | |||
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|short_description=p6@SFTPB | |||
}} | }} |
Latest revision as of 17:10, 18 September 2015
Short description: | p6@SFTPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SFTPB_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_uc010ysw.1_5end |
EntrezGene: | SFTPB |
HGNC: | 10801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.84e-34 | 1 |
right lung lobe | 1.84e-34 | 1 |
lower lobe of lung | 1.84e-34 | 1 |
lobe of lung | 1.84e-34 | 1 |
right lung | 1.84e-34 | 1 |
lung | 2.38e-14 | 22 |
respiratory tube | 2.38e-14 | 22 |
respiration organ | 2.38e-14 | 22 |
pair of lungs | 2.38e-14 | 22 |
lung primordium | 2.38e-14 | 22 |
lung bud | 2.38e-14 | 22 |
thoracic cavity element | 1.48e-09 | 34 |
thoracic cavity | 1.48e-09 | 34 |
thoracic segment organ | 2.65e-09 | 35 |
epithelial bud | 7.74e-09 | 37 |
respiratory primordium | 1.27e-08 | 38 |
endoderm of foregut | 1.27e-08 | 38 |
thyroid gland | 7.49e-08 | 5 |
pharyngeal pouch | 7.49e-08 | 5 |
thyroid diverticulum | 7.49e-08 | 5 |
pharyngeal pouch 2 | 7.49e-08 | 5 |
thyroid primordium | 7.49e-08 | 5 |
epithelial fold | 4.22e-07 | 47 |
endo-epithelium | 5.27e-07 | 82 |