FFCP PHASE1:Hg19::chr3:107318229..107318239,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:107318229..107318239,+
|short_description=p17@BBX
|description=CAGE_peak_17_at_BBX_5end
|association_with_transcript=69bp_to_ENST00000406780_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56987 | |EntrezGene=56987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14422 | |HGNC=14422 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=69bp_to_ENST00000406780_5end | |||
|cluster_id=chr3:107318229..107318239,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_17_at_BBX_5end | |||
|id=chr3:107318229..107318239,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.25e-15!42;CL:0002194!3.77e-15!63;CL:0000576!3.77e-15!63;CL:0000040!3.77e-15!63;CL:0000559!3.77e-15!63;CL:0002009!2.18e-14!65;CL:0000860!4.62e-14!45;CL:0000557!1.55e-13!71;CL:0000839!1.10e-12!70;CL:0000766!6.48e-12!76;CL:0002087!1.77e-11!119;CL:0000037!1.58e-10!172;CL:0000566!1.58e-10!172;CL:0000738!4.49e-10!140;CL:0002031!7.48e-10!124;CL:0000988!9.35e-10!182;CL:0000763!1.03e-09!112;CL:0000049!1.03e-09!112;CL:0002032!7.16e-09!165;CL:0000837!7.16e-09!165;CL:0002393!1.53e-07!9;CL:0002397!1.53e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.81e-24;33!CL:0002057;4.81e-24;33!CL:0000473;1.71e-17;39!CL:0000234;1.71e-17;39!CL:0000576;2.02e-16;48!CL:0000784;1.91e-15;3!CL:0002032;3.26e-12;1!CL:0000557;3.26e-12;1!CL:0000766;8.61e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.15e-25,42;CL:0002057,2.15e-25,42;CL:0000473,4.59e-22,48;CL:0000234,4.59e-22,48;CL:0000557,2.07e-18,67;CL:0002194,2.14e-17,59;CL:0000576,2.14e-17,59;CL:0000040,2.14e-17,59;CL:0000559,2.14e-17,59;CL:0002009,8.57e-17,61;CL:0000784,1.32e-15,3;CL:0000839,1.92e-15,66;CL:0000766,4.59e-14,72;CL:0000763,4.28e-13,108;CL:0000049,4.28e-13,108;CL:0000037,5.68e-11,168;CL:0000988,2.59e-10,177;CL:0000738,4.58e-10,136;CL:0002087,2.40e-08,115;CL:0002032,3.06e-08,161;CL:0000837,3.06e-08,161;CL:0002031,6.05e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;3.26e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.46e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.09e-12!112;UBERON:0002371!5.95e-12!80;UBERON:0002390!9.53e-12!102;UBERON:0003061!9.53e-12!102;UBERON:0002405!1.30e-10!115;UBERON:0001474!1.91e-10!86;UBERON:0004765!6.81e-09!101;UBERON:0001434!6.81e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.38e-16,76;UBERON:0001474,8.19e-15,82;UBERON:0004765,2.23e-13,90;UBERON:0002405,6.68e-13,93;UBERON:0002390,3.58e-12,98;UBERON:0003061,3.58e-12,98;UBERON:0001434,6.69e-12,100;UBERON:0002193,6.50e-11,108 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0.880801318004542,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,10.9323109082417,11.0149103807513,15.1348627128695,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0,9.23583640522805,11.9678194572979,9.80316926225197,0.290209238628584,0.56738522469114,0,4.77372463987812,8.86520961314342,9.99068685643537,0.605399502633369,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0,0,0,0,1.19350006319454,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.531831842075461,0.476981248610684,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.445893486866185,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0.482561763430822,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,2.04628948090749,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0,0.136905378891993,1.27746588066972,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0.701139929541673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0.939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.258355639344024,0.124149428591716,0,0,0.606351566874658,0.217716747896961,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 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|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0.880801318004542,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,10.9323109082417,11.0149103807513,15.1348627128695,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0,9.23583640522805,11.9678194572979,9.80316926225197,0.290209238628584,0.56738522469114,0,4.77372463987812,8.86520961314342,9.99068685643537,0.605399502633369,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0,0,0,0,1.19350006319454,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.531831842075461,0.476981248610684,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.445893486866185,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0.482561763430822,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,2.04628948090749,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0,0.136905378891993,1.27746588066972,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0.701139929541673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0.939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.258355639344024,0.124149428591716,0,0,0.606351566874658,0.217716747896961,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p17@BBX | |||
}} | }} |
Latest revision as of 10:31, 19 September 2015
Short description: | p17@BBX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_BBX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 69bp_to_ENST00000406780_5end |
EntrezGene: | BBX |
HGNC: | 14422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.15e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.15e-25 | 42 |
defensive cell | 4.59e-22 | 48 |
phagocyte | 4.59e-22 | 48 |
granulocyte monocyte progenitor cell | 2.07e-18 | 67 |
monopoietic cell | 2.14e-17 | 59 |
monocyte | 2.14e-17 | 59 |
monoblast | 2.14e-17 | 59 |
promonocyte | 2.14e-17 | 59 |
macrophage dendritic cell progenitor | 8.57e-17 | 61 |
plasmacytoid dendritic cell | 1.32e-15 | 3 |
myeloid lineage restricted progenitor cell | 1.92e-15 | 66 |
myeloid leukocyte | 4.59e-14 | 72 |
myeloid cell | 4.28e-13 | 108 |
common myeloid progenitor | 4.28e-13 | 108 |
hematopoietic stem cell | 5.68e-11 | 168 |
hematopoietic cell | 2.59e-10 | 177 |
leukocyte | 4.58e-10 | 136 |
nongranular leukocyte | 2.40e-08 | 115 |
hematopoietic oligopotent progenitor cell | 3.06e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.06e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 6.05e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.38e-16 | 76 |
bone element | 8.19e-15 | 82 |
skeletal element | 2.23e-13 | 90 |
immune system | 6.68e-13 | 93 |
hematopoietic system | 3.58e-12 | 98 |
blood island | 3.58e-12 | 98 |
skeletal system | 6.69e-12 | 100 |
hemolymphoid system | 6.50e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.46e-12 | 1 |