FFCP PHASE1:Hg19::chr3:31574148..31574159,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:31574148..31574159,+
|short_description=p7@STT3B
|description=CAGE_peak_7_at_STT3B_5end
|association_with_transcript=18bp_to_ENST00000453168_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201595 | |EntrezGene=201595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30611 | |HGNC=30611 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000453168_5end | |||
|cluster_id=chr3:31574148..31574159,+ | |||
|description=CAGE_peak_7_at_STT3B_5end | |||
|id=chr3:31574148..31574159,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.51e-10!172;CL:0000566!1.51e-10!172;CL:0000988!2.18e-09!182;CL:0002032!2.66e-09!165;CL:0000837!2.66e-09!165;CL:0000763!2.53e-08!112;CL:0000049!2.53e-08!112;CL:0002057!1.33e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.12e-14,168;CL:0000988,1.59e-12,177;CL:0002032,1.84e-12,161;CL:0000837,1.84e-12,161;CL:0000763,5.87e-11,108;CL:0000049,5.87e-11,108;CL:0000738,2.74e-08,136;CL:0002087,1.17e-07,115;CL:0002031,1.45e-07,120;CL:0000557,6.85e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.36e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.67e-07,93;UBERON:0002390,5.11e-07,98;UBERON:0003061,5.11e-07,98;UBERON:0003688,7.28e-07,6;UBERON:0002358,7.28e-07,6;UBERON:0003684,7.28e-07,6;UBERON:0001178,7.28e-07,6;UBERON:0002371,7.73e-07,76 | |||
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| ||
|short_description=p7@STT3B | |||
}} | }} |
Latest revision as of 22:37, 17 September 2015
Short description: | p7@STT3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_STT3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000453168_5end |
EntrezGene: | STT3B |
HGNC: | 30611 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.12e-14 | 168 |
hematopoietic cell | 1.59e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.84e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-12 | 161 |
myeloid cell | 5.87e-11 | 108 |
common myeloid progenitor | 5.87e-11 | 108 |
leukocyte | 2.74e-08 | 136 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 1.45e-07 | 120 |
granulocyte monocyte progenitor cell | 6.85e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.67e-07 | 93 |
hematopoietic system | 5.11e-07 | 98 |
blood island | 5.11e-07 | 98 |
omentum | 7.28e-07 | 6 |
peritoneum | 7.28e-07 | 6 |
abdominal cavity | 7.28e-07 | 6 |
visceral peritoneum | 7.28e-07 | 6 |
bone marrow | 7.73e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.36e-07 | 39 |