FFCP PHASE1:Hg19::chr3:39322728..39322765,-: Difference between revisions
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|id=chr3:39322728..39322765,-
|short_description=p4@CX3CR1
|description=CAGE_peak_4_at_CX3CR1_5end
|association_with_transcript=0bp_to_ENST00000412814,ENST000005413...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1524 | |EntrezGene=1524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2558 | |HGNC=2558 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLM2,P49238 | |UniProt=C9JLM2,P49238 | ||
|association_with_transcript=0bp_to_ENST00000412814,ENST00000541347,NM_001171171_5end | |||
|cluster_id=chr3:39322728..39322765,- | |||
|description=CAGE_peak_4_at_CX3CR1_5end | |||
|id=chr3:39322728..39322765,- | |||
|ontology_enrichment_celltype=CL:0000625!7.56e-19!11;CL:0000791!7.94e-11!18;CL:0000789!7.94e-11!18;CL:0002420!7.94e-11!18;CL:0002419!7.94e-11!18;CL:0000790!7.94e-11!18;CL:0002393!2.72e-10!9;CL:0002397!2.72e-10!9;CL:0000623!7.76e-10!3;CL:0000825!7.76e-10!3;CL:0000842!4.93e-09!3;CL:0000084!2.55e-07!25;CL:0000827!2.55e-07!25;CL:0000224!7.28e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.36e-20;3!CL:0001014;1.39e-08;2!CL:0001016;1.39e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.02e-20,3;CL:0000825,4.02e-20,3;CL:0001014,1.61e-08,2;CL:0001016,1.61e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.36e-20;3!UBERON:0003057;5.36e-20;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;5.36e-20;3!UBERON:0005174;5.36e-20;3!UBERON:0001137;5.36e-20;3!UBERON:0002336;7.45e-16;1!UBERON:0011215;7.45e-16;1!UBERON:0001018;7.45e-16;1!UBERON:0002473;7.45e-16;1!UBERON:0005340;7.45e-16;1!UBERON:0003544;7.45e-16;1!UBERON:0005970;7.45e-16;1!UBERON:0002316;7.45e-16;1!UBERON:0001020;7.45e-16;1!UBERON:0002437;7.45e-16;1!UBERON:0005162;1.39e-08;2!UBERON:0000122;1.39e-08;2!UBERON:0001876;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,3.01e-20,3;UBERON:0005174,3.01e-20,3;UBERON:0001137,3.01e-20,3;UBERON:0002336,8.63e-16,1;UBERON:0011215,8.63e-16,1;UBERON:0001018,8.63e-16,1;UBERON:0002473,8.63e-16,1;UBERON:0005340,8.63e-16,1;UBERON:0003544,8.63e-16,1;UBERON:0005970,8.63e-16,1;UBERON:0002316,8.63e-16,1;UBERON:0001020,8.63e-16,1;UBERON:0002437,8.63e-16,1;UBERON:0003076,2.63e-09,15;UBERON:0003057,2.63e-09,15;UBERON:0001049,8.94e-09,56;UBERON:0005068,8.94e-09,56;UBERON:0006241,8.94e-09,56;UBERON:0007135,8.94e-09,56;UBERON:0005162,1.50e-08,2;UBERON:0000122,1.50e-08,2;UBERON:0001876,2.00e-08,2 | |||
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| ||
|short_description=p4@CX3CR1 | |||
}} | }} |
Latest revision as of 03:56, 18 September 2015
Short description: | p4@CX3CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CX3CR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412814, ENST00000541347, NM_001171171_5end |
EntrezGene: | CX3CR1 |
HGNC: | 2558 |
UniProt: | C9JLM2P49238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.02e-20 | 3 |
pro-NK cell | 4.02e-20 | 3 |
CD1a-positive Langerhans cell | 1.61e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 3.01e-20 | 3 |
dorsal region element | 3.01e-20 | 3 |
dorsum | 3.01e-20 | 3 |
corpus callosum | 8.63e-16 | 1 |
central nervous system cell part cluster | 8.63e-16 | 1 |
axon tract | 8.63e-16 | 1 |
intercerebral commissure | 8.63e-16 | 1 |
dorsal telencephalic commissure | 8.63e-16 | 1 |
brain white matter | 8.63e-16 | 1 |
brain commissure | 8.63e-16 | 1 |
white matter | 8.63e-16 | 1 |
nervous system commissure | 8.63e-16 | 1 |
cerebral hemisphere white matter | 8.63e-16 | 1 |
posterior neural tube | 2.63e-09 | 15 |
chordal neural plate | 2.63e-09 | 15 |
neural tube | 8.94e-09 | 56 |
neural rod | 8.94e-09 | 56 |
future spinal cord | 8.94e-09 | 56 |
neural keel | 8.94e-09 | 56 |
multi cell component structure | 1.50e-08 | 2 |
neuron projection bundle | 1.50e-08 | 2 |
amygdala | 2.00e-08 | 2 |